Set 01: ATM / SCID
Phenotypes:
- ATM_minus
- ATM-/- Tumor - 4 Samples
- ATM_plus
- ATM+/+ normal thymocytes - 3 Samples
- SCID
- Irradiated New-Born SCID cells - 3 Samples
Platform: Affymetrix MOE430 v2
GSEA-preRanked reports for "moderated t-Test":
Note:
The ranked gene lists were extracted from a files named "pvals.txt" with the R-Code posted on:
http://baderlab.org/CancerStemCellProject/CodeRepository#extract_moderated_tStatisctic_to_RNK_Set01_ATM_SCID.R
The R-Code to calculate the moderated t-Test is archived on:
http://baderlab.org/CancerStemCellProject/CodeRepository#moderated_t_Statistic_for_Set_01
GSEA reports for "GSEA t-Test":
GSEA reports for "Log2_Ratio_of_Classes":