Set 06: DM/TM

Phenotypes:

DMpreB: leukemic cells - 3 Samples
TMpreB: leukemic cells that infiltrate the CNS - 3 Samples
preB: normal precursor B cells - 3 Samples
proB: normal prprogenitor B cells - 3 Samples

Platform: Affymetrix MOE430 v2

Note: The originally computed t-Statistics for this dataset were never saved to a file but directly processed to FDR-adjusted q-Values. Based on the original R-Code, which could be recovered from Vicki Ling's Folder on the Guido's Labfiles server, the t-Statistics were re-computed with the R-Code archived on: http://baderlab.org/CancerStemCellProject/CodeRepository#moderated_tTest.R and validated to reproduce the FDR-adjusted q-Values from the original analysis.

Note 2: Eniko Papp took over to analyze this dataset with GSEA.