Details for gene set REACTOME_SIGNALING_IN_IMMUNE

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	transDMpreB
GeneSet	REACTOME_SIGNALING_IN_IMMUNE_SYSTEM
Enrichment Score (ES)	0.6054788
Normalized Enrichment Score (NES)	1.4659194
Nominal p-value	0.0054151625
FDR q-value	0.9262703
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GRB7	20673	44	1.580	0.0956	Yes
2	MAP3K7IP1	2193 2171 22419	59	1.517	0.1890	Yes
3	CD86	1660 22601	165	0.896	0.2389	Yes
4	FCER1G	13759	239	0.726	0.2799	Yes
5	CD47	4933	338	0.593	0.3114	Yes
6	FCGR2B	8959	449	0.503	0.3366	Yes
7	PTPN6	17002	489	0.478	0.3642	Yes
8	UBE2N	8216 19898	515	0.466	0.3918	Yes
9	WAS	24193	554	0.440	0.4170	Yes
10	C3	22915	569	0.432	0.4430	Yes
11	MAP3K1	21348	633	0.393	0.4640	Yes
12	CD19	17640	745	0.342	0.4792	Yes
13	CD48	14051	758	0.337	0.4995	Yes
14	TIRAP	3075 19187	810	0.320	0.5166	Yes
15	IKBKB	4907	861	0.304	0.5327	Yes
16	IRF3	2149 2188 18255	1221	0.207	0.5261	Yes
17	CSK	8805	1270	0.197	0.5357	Yes
18	BSG	19964 3331	1276	0.195	0.5476	Yes
19	MAP3K7	16255	1335	0.182	0.5557	Yes
20	NFKBIA	21065	1447	0.167	0.5601	Yes
21	SELL	9798	1468	0.163	0.5691	Yes
22	RELA	23783	1532	0.154	0.5753	Yes
23	MAP3K8	23495	1536	0.153	0.5846	Yes
24	CHUK	23665	1559	0.150	0.5928	Yes
25	VAV1	23173	1577	0.148	0.6010	Yes
26	TYROBP	18302	1673	0.133	0.6041	Yes
27	PDPK1	23097	1785	0.119	0.6055	Yes
28	ITGAL	9187	1927	0.100	0.6040	No
29	ITGB2	19978	2033	0.089	0.6039	No
30	CD3D	19473	2239	0.072	0.5973	No
31	PPIA	1284 11188	2281	0.069	0.5993	No
32	C1QB	8667	2428	0.061	0.5952	No
33	VCAM1	5851	2636	0.049	0.5870	No
34	ZAP70	14271 4042	2953	0.038	0.5723	No
35	C1S	6950 6949	3178	0.032	0.5622	No
36	PIK3C3	23607	3199	0.032	0.5631	No
37	RIPK1	5381	3271	0.030	0.5611	No
38	FYB	10717	3333	0.028	0.5595	No
39	MBL2	23886	3590	0.024	0.5471	No
40	PAK1	9527	3642	0.023	0.5458	No
41	LAT	17643	3664	0.023	0.5460	No
42	CFD	19957	3702	0.022	0.5454	No
43	CD160	12023	3727	0.021	0.5454	No
44	ITGB3	20631	3749	0.021	0.5456	No
45	RIPK2	2528 15935	3768	0.021	0.5459	No
46	NFKBIB	17906	3804	0.020	0.5453	No
47	TLR1	10190	3934	0.019	0.5395	No
48	CD14	23452	3948	0.019	0.5399	No
49	DOK2	354	3951	0.019	0.5410	No
50	LBP	14760	4598	0.013	0.5068	No
51	C6	22522 8671	4703	0.012	0.5019	No
52	CAV1	8698	4710	0.012	0.5023	No
53	ITGA5	22105	4968	0.010	0.4891	No
54	CD28	14239 4092	4992	0.010	0.4885	No
55	PLCG1	14753	5548	0.008	0.4589	No
56	GRB14	14574 2719	5569	0.008	0.4583	No
57	B2M	72 14882	5721	0.007	0.4506	No
58	SOS1	5476	5736	0.007	0.4503	No
59	CD3G	19139	5785	0.007	0.4481	No
60	ITGAX	18058	5823	0.007	0.4466	No
61	PTPRC	5327 9662	5983	0.006	0.4384	No
62	ITGAV	4931	6031	0.006	0.4362	No
63	NCK1	9447 5152	6199	0.006	0.4275	No
64	LCP2	4988 9268	6272	0.005	0.4240	No
65	ANGPT1	8588 2260 22303	6701	0.004	0.4011	No
66	CXADR	22720	6818	0.004	0.3950	No
67	C8A	15823	7044	0.003	0.3831	No
68	ICOSLG	19973	7202	0.003	0.3748	No
69	GAS6	18927	7527	0.002	0.3574	No
70	SPN	452 5493	7595	0.002	0.3539	No
71	C8B	16163	7731	0.002	0.3467	No
72	PIK3R1	3170	7781	0.002	0.3442	No
73	OLR1	8427 4233	7897	0.002	0.3380	No
74	EEA1	5695 10097	7921	0.001	0.3369	No
75	ITK	4934	8022	0.001	0.3316	No
76	LYN	16281	8372	0.001	0.3127	No
77	CDH1	18479	8402	0.001	0.3112	No
78	KIR3DL1	2611 6365	8747	-0.000	0.2926	No
79	CD40LG	24330	8842	-0.000	0.2875	No
80	ITGA4	4929	8961	-0.001	0.2812	No
81	TLR5	14017	8983	-0.001	0.2801	No
82	PRKCQ	2873 2831	9311	-0.001	0.2624	No
83	AKT1	8568	9661	-0.002	0.2437	No
84	C9	22518 2246	9802	-0.002	0.2363	No
85	ENAH	4665 8901	9896	-0.003	0.2314	No
86	CD3E	8714	10010	-0.003	0.2255	No
87	MASP1	1632 22626	10112	-0.003	0.2202	No
88	ANGPT2	14885 3783 18923	10658	-0.005	0.1910	No
89	TICAM2	23440	10724	-0.005	0.1878	No
90	GRAP2	5113 9398	10970	-0.005	0.1749	No
91	CRTAM	19160	11108	-0.006	0.1678	No
92	PTEN	5305	11437	-0.007	0.1505	No
93	PIK3CA	9562	11488	-0.007	0.1482	No
94	PROC	23475	11587	-0.007	0.1433	No
95	TEK	16175	11713	-0.008	0.1370	No
96	IFITM1	18017 7578 12724	11959	-0.008	0.1243	No
97	JAM2	7428 22718 12519	11964	-0.008	0.1246	No
98	PTPN11	5326 16391 9660	12011	-0.009	0.1226	No
99	CD226	5920	12185	-0.009	0.1139	No
100	CD4	16999	12192	-0.009	0.1141	No
101	CD96	22580	12400	-0.010	0.1036	No
102	CTLA4	14238	12444	-0.011	0.1019	No
103	ITGAM	9188	12542	-0.011	0.0973	No
104	C1QA	8666	12698	-0.012	0.0897	No
105	C1R	11942 6951 6952	12702	-0.012	0.0902	No
106	MERTK	5094	12975	-0.014	0.0764	No
107	TLR3	18884	12979	-0.014	0.0771	No
108	SHC1	9813 9812 5430	13160	-0.015	0.0682	No
109	C1QC	15706	13243	-0.015	0.0648	No
110	APOB	21322	13759	-0.020	0.0381	No
111	NFKB1	15160	13838	-0.021	0.0352	No
112	TLR4	2329 10191 5770	14147	-0.024	0.0200	No
113	PDCD1	13870	14171	-0.025	0.0203	No
114	MAG	17880	14274	-0.026	0.0164	No
115	SLC16A3	481 482	14284	-0.026	0.0176	No
116	FN1	4091 4094 971 13929	15113	-0.044	-0.0245	No
117	ATF2	4418 2759	15227	-0.047	-0.0277	No
118	CD200	9404 58	15348	-0.051	-0.0310	No
119	ITGB1	3872 18411	15782	-0.069	-0.0502	No
120	FYN	3375 3395 20052	15795	-0.069	-0.0465	No
121	CD2	15223	15836	-0.071	-0.0443	No
122	CD80	22758	15922	-0.076	-0.0442	No
123	KRAS	9247	15933	-0.076	-0.0400	No
124	LY86	21665	15965	-0.078	-0.0368	No
125	F2	14524	16051	-0.082	-0.0363	No
126	C2	23013	16152	-0.089	-0.0362	No
127	PPIL2	22648	16319	-0.100	-0.0390	No
128	MAPK8	6459	16496	-0.113	-0.0415	No
129	JUN	15832	16520	-0.114	-0.0357	No
130	TLR2	15308	16615	-0.123	-0.0331	No
131	PIK3CB	19030	17205	-0.186	-0.0535	No
132	THBD	14404	17239	-0.190	-0.0435	No
133	BCL10	15397	17346	-0.203	-0.0366	No
134	CD81	8719	17396	-0.209	-0.0262	No
135	MAPK1	1642 11167	17642	-0.244	-0.0243	No
136	LCK	15746	18528	-1.241	0.0048	No