Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_truncNotch.phenotype_wtNotch_versus_truncNotch.cls #wtNotch_versus_truncNotch.phenotype_wtNotch_versus_truncNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_wtNotch_versus_truncNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	-0.6901053
Normalized Enrichment Score (NES)	-1.6928827
Nominal p-value	0.0
FDR q-value	0.13777566
FWER p-Value	0.357

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	STARD10	1400619 4570170	2221	0.135	-0.1108	No
2	SPINK2	3990093	2248	0.133	-0.1031	No
3	SRD5A1	5910347	2312	0.125	-0.0980	No
4	ALAS1	6400440	2324	0.124	-0.0901	No
5	AMFR	2810041	2325	0.124	-0.0817	No
6	F10	3830450	2421	0.113	-0.0791	No
7	SEC14L2	2640370	2452	0.111	-0.0732	No
8	MRPL46	360736	2514	0.104	-0.0693	No
9	ITPR2	5360128	2911	0.074	-0.0857	No
10	AR	6380167	3192	0.056	-0.0970	No
11	IL6R	520706 3800215	3211	0.055	-0.0943	No
12	EHHADH	6200315	3477	0.043	-0.1057	No
13	SLC27A5	2850717	3869	0.030	-0.1248	No
14	WNT11	1230278	4976	0.013	-0.1837	No
15	HGD	460390	5221	0.011	-0.1961	No
16	DIO1	4570279 5290112 5420148	5243	0.011	-0.1965	No
17	MTSS1	780435 2370114	6065	0.006	-0.2405	No
18	ASGR1	1850088	6107	0.006	-0.2423	No
19	CES3	5050167 3290458	6131	0.006	-0.2431	No
20	MYRIP	1580471	6149	0.006	-0.2437	No
21	SLC2A2	5130537 5720722 6770079	6182	0.006	-0.2450	No
22	CES1	1400494	6214	0.005	-0.2463	No
23	HPD	3120519	6332	0.005	-0.2523	No
24	CABIN1	6900446	6447	0.005	-0.2581	No
25	HYAL1	3850341	6575	0.004	-0.2647	No
26	SALL1	5420020 7050195	6957	0.003	-0.2851	No
27	MST1	1400403	7425	0.001	-0.3103	No
28	BAAT	730739	7518	0.001	-0.3152	No
29	SULT2A1	2650286	7550	0.001	-0.3168	No
30	ABCG5	2810670	7583	0.001	-0.3185	No
31	PIPOX	70750	7807	0.000	-0.3305	No
32	PAH	3800309	7857	0.000	-0.3331	No
33	APOA5	6130471	7899	-0.000	-0.3353	No
34	PCK1	7000358	8120	-0.001	-0.3472	No
35	CUTL2	2940692 6220687	8126	-0.001	-0.3474	No
36	ITIH1	670044	8128	-0.001	-0.3474	No
37	TTBK1	60605 1850722	8477	-0.002	-0.3661	No
38	PKLR	1170400 2470114	8544	-0.002	-0.3696	No
39	ANXA9	1190195	8616	-0.002	-0.3733	No
40	TTPA	630576	8659	-0.002	-0.3754	No
41	FMO3	2480369	8718	-0.002	-0.3784	No
42	AOX1	110082 6290450	8896	-0.003	-0.3877	No
43	NF1	6980433	8907	-0.003	-0.3881	No
44	RHBG	2810736	8936	-0.003	-0.3894	No
45	SLC6A12	3170685	8948	-0.003	-0.3898	No
46	CES2	5340609	9221	-0.004	-0.4042	No
47	APOC3	2030168	9311	-0.004	-0.4088	No
48	SERPINC1	1780717	9497	-0.005	-0.4184	No
49	APCS	2060500	9640	-0.005	-0.4258	No
50	UGT1A6	4610368 6900086 4540092 2630075	9731	-0.005	-0.4303	No
51	CDO1	2480279	9778	-0.005	-0.4324	No
52	AMACR	780215	9883	-0.006	-0.4376	No
53	LPIN1	1770358 3120059	9933	-0.006	-0.4399	No
54	MPDZ	130026 1990064 4050577	10010	-0.006	-0.4435	No
55	HAO1	7050093	10287	-0.007	-0.4580	No
56	OTC	1740494	10350	-0.007	-0.4608	No
57	DPYS	3130670	10625	-0.009	-0.4750	No
58	F13B	6220278	10826	-0.009	-0.4852	No
59	MUCDHL	5720056	11200	-0.011	-0.5046	No
60	KLK3	1500278	11253	-0.011	-0.5067	No
61	ABCA6	130538 1050706	11396	-0.012	-0.5135	No
62	AQP9	2650047	11529	-0.013	-0.5198	No
63	CPB2	4150167 6100333 6590735	11661	-0.013	-0.5259	No
64	ZP3	4060767	11767	-0.014	-0.5306	No
65	RGN	6200095	12228	-0.017	-0.5543	No
66	ABCC2	380202 5390300	12479	-0.020	-0.5665	No
67	SGPL1	4480059	12557	-0.020	-0.5693	No
68	ABCG8	4780605	12595	-0.021	-0.5699	No
69	SERPIND1	6110059	12769	-0.022	-0.5777	No
70	PRDX6	4920397 6380601	12934	-0.024	-0.5849	No
71	GJB1	1240441	13121	-0.026	-0.5932	No
72	MSRA	4570411	13360	-0.030	-0.6040	No
73	CPN2	6590291	13565	-0.033	-0.6128	No
74	VPREB1	3520280	13646	-0.034	-0.6147	No
75	RDH5	2970736 3940632 5340730 6370093 4610059	13702	-0.035	-0.6153	No
76	AMT	3180450	14301	-0.048	-0.6444	No
77	INSIG1	1500332 3450458 4540301	14368	-0.050	-0.6445	No
78	GLYAT	6200239	14451	-0.052	-0.6454	No
79	CRAT	540020 2060364 3520148	14478	-0.053	-0.6432	No
80	SLC38A3	5340142	14653	-0.059	-0.6486	No
81	F12	1090215 3520736	14778	-0.063	-0.6510	No
82	INSR	1190504	14956	-0.070	-0.6558	No
83	HAGH	540358	15159	-0.079	-0.6613	No
84	PPAP2A	1170397 3440288 3930270	15268	-0.085	-0.6614	No
85	G6PC	430093	15785	-0.120	-0.6811	Yes
86	IVD	2510673	15884	-0.129	-0.6776	Yes
87	MASP2	360110	16117	-0.152	-0.6797	Yes
88	PCYT2	2630092 4590278	16236	-0.166	-0.6747	Yes
89	ACOX2	450017	16400	-0.188	-0.6707	Yes
90	MVK	1450717	16474	-0.197	-0.6613	Yes
91	ECHS1	2970184	16781	-0.240	-0.6614	Yes
92	ENPP5	1780338	16931	-0.263	-0.6515	Yes
93	NDUFS2	4850020 6200402	17105	-0.292	-0.6410	Yes
94	MAP4K1	4060692	17127	-0.297	-0.6218	Yes
95	C1QTNF4	60619	17128	-0.297	-0.6016	Yes
96	SLC35D1	1740520	17174	-0.305	-0.5832	Yes
97	ABHD6	630717	17259	-0.324	-0.5656	Yes
98	ALDH4A1	2450450	17260	-0.324	-0.5435	Yes
99	PCCB	50670	17328	-0.337	-0.5241	Yes
100	SERPINF1	7040367	17334	-0.338	-0.5013	Yes
101	SELENBP1	3850575	17374	-0.346	-0.4797	Yes
102	EGLN2	540086	17461	-0.361	-0.4598	Yes
103	EPHX1	1740136	17508	-0.371	-0.4369	Yes
104	SERPING1	5550440	17650	-0.414	-0.4163	Yes
105	SLC25A10	1400609	17655	-0.415	-0.3882	Yes
106	KHK	1090204 3870204	17707	-0.430	-0.3616	Yes
107	PINK1	380044 580577	18007	-0.554	-0.3400	Yes
108	ACADS	110746	18145	-0.657	-0.3025	Yes
109	CRYL1	1340427	18151	-0.660	-0.2577	Yes
110	DCXR	4730551	18185	-0.689	-0.2125	Yes
111	C2	5390465	18238	-0.760	-0.1634	Yes
112	CPT2	3940504 6180075	18487	-1.246	-0.0918	Yes
113	NDRG2	450403	18512	-1.446	0.0056	Yes