Details for gene set EMT

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_truncNotch.phenotype_wtNotch_versus_truncNotch.cls #wtNotch_versus_truncNotch.phenotype_wtNotch_versus_truncNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_wtNotch_versus_truncNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	EMT_UP
Enrichment Score (ES)	-0.7238764
Normalized Enrichment Score (NES)	-1.6230763
Nominal p-value	0.003502627
FDR q-value	0.20919938
FWER p-Value	0.892

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BCL3	3990440	1864	0.187	-0.0814	No
2	STAT1	6510204 6590553	2257	0.131	-0.0892	No
3	COL6A1	1410670 2940091 6510086	2693	0.090	-0.1035	No
4	SLC3A2	5270358	2740	0.086	-0.0972	No
5	PDGFRB	6450279	3105	0.061	-0.1106	No
6	MMP12	4920070	3722	0.034	-0.1403	No
7	CYP1B1	4760735	3790	0.032	-0.1407	No
8	DCN	510332 5340026 5900711 6550092	4261	0.022	-0.1638	No
9	TNXB	630592 3830020 5360497 7000673	4440	0.019	-0.1715	No
10	DDR2	7050273	4498	0.018	-0.1728	No
11	SPARC	1690086	4792	0.015	-0.1871	No
12	PLA2G7	4730092	4828	0.014	-0.1875	No
13	GAS1	2120504	5882	0.007	-0.2436	No
14	MMP13	510471 3940097	6176	0.006	-0.2588	No
15	IL11	1740398	6195	0.006	-0.2592	No
16	PPIC	4570110	7061	0.002	-0.3055	No
17	IFIT3	2450278 3190113 6200113	7101	0.002	-0.3074	No
18	PTPN22	1690647 7100239	7335	0.002	-0.3198	No
19	PROCR	4920687	7852	0.000	-0.3476	No
20	PDGFRA	2940332	8180	-0.001	-0.3651	No
21	CXCR7	2630301	9363	-0.004	-0.4284	No
22	HIF1A	5670605	9774	-0.005	-0.4499	No
23	B2M	5080332 5130059	10543	-0.008	-0.4905	No
24	CXCL5	6370333	10617	-0.008	-0.4935	No
25	FMO1	5360086	11703	-0.014	-0.5506	No
26	CTSZ	1500687 1690364	11868	-0.015	-0.5579	No
27	CDH15	460014	12140	-0.017	-0.5708	No
28	PTGS1	730193 1780273 6450195	12981	-0.025	-0.6136	No
29	UPP1	3850358 3940100	12992	-0.025	-0.6116	No
30	SDC2	1980168	13057	-0.026	-0.6124	No
31	CDH2	520435 2450451 2760025 6650477	13234	-0.028	-0.6190	No
32	MTHFD2	3800411	13471	-0.031	-0.6285	No
33	VLDLR	870722 3060047 5340452 6550131	13598	-0.033	-0.6319	No
34	SNAI1	6590253	13687	-0.035	-0.6331	No
35	TNC	670053 1780039 1980020 3060411 4780091 6860433	14382	-0.050	-0.6654	No
36	PCOLCE	4210433	14411	-0.051	-0.6617	No
37	CFH	1240053 2030541 5900731	14670	-0.059	-0.6696	No
38	HTRA1	3450601	15487	-0.099	-0.7035	No
39	DAB2	60309	15688	-0.112	-0.7029	No
40	ASNS	110368 7100687	15864	-0.128	-0.6993	No
41	VIM	20431	16321	-0.177	-0.7059	Yes
42	GALK1	840162	16389	-0.186	-0.6905	Yes
43	MMP2	2570603	16423	-0.190	-0.6729	Yes
44	RRAS	4150609	16477	-0.197	-0.6557	Yes
45	COL6A2	1780142	16593	-0.213	-0.6402	Yes
46	ADA	2120403 3130075	16808	-0.245	-0.6268	Yes
47	IRF7	1570605	16971	-0.268	-0.6082	Yes
48	SRM	1850097 2480162	17737	-0.442	-0.6044	Yes
49	PMP22	4010239 6550072	17895	-0.499	-0.5620	Yes
50	PHGDH	1500280	17984	-0.536	-0.5122	Yes
51	CD68	6350450	18041	-0.578	-0.4564	Yes
52	ISG15	3170093	18067	-0.597	-0.3969	Yes
53	SLPI	2120446	18212	-0.723	-0.3310	Yes
54	IFITM3	2340358	18344	-0.930	-0.2434	Yes
55	ADSSL1	4850132 7000288	18386	-0.987	-0.1451	Yes
56	S100A8	70112	18531	-1.547	0.0046	Yes