Details for gene set POSITIVE_REGULATION_OF_NUCLEOBASE__NUCLEOSIDE__NUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	wtNotch
GeneSet	POSITIVE_REGULATION_OF_NUCLEOBASE__NUCLEOSIDE__NUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS
Enrichment Score (ES)	-0.60596603
Normalized Enrichment Score (NES)	-1.5770233
Nominal p-value	0.0027322404
FDR q-value	0.23398727
FWER p-Value	0.974

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EGR1	4610347	214	1.010	0.0207	No
2	ERCC2	2360750 4060390 6550138	470	0.657	0.0278	No
3	SMAD3	6450671	532	0.607	0.0439	No
4	TNFSF13	2650170	776	0.479	0.0461	No
5	SQSTM1	6550056	1025	0.393	0.0452	No
6	BMP7	870039	1090	0.375	0.0537	No
7	HMGA1	6580408	1226	0.349	0.0576	No
8	SCAP	3800706	1230	0.349	0.0685	No
9	SMARCD1	3060193 3850184 6400369	1240	0.347	0.0791	No
10	SUPT4H1	6200056	1313	0.332	0.0858	No
11	RBM14	5340731 5690315	1486	0.297	0.0860	No
12	MRPL12	3120112	1636	0.270	0.0866	No
13	NUP62	1240128	1640	0.269	0.0950	No
14	EPC1	1570050 5290095 6900193	2078	0.205	0.0779	No
15	MYST3	5270500	2270	0.181	0.0734	No
16	TRIM28	380292	2399	0.165	0.0717	No
17	TGFB1	1940162	2566	0.146	0.0674	No
18	SUPT5H	4150546	2670	0.135	0.0661	No
19	SPI1	1410397	2778	0.125	0.0644	No
20	MYST1	2190397	2865	0.117	0.0635	No
21	EPAS1	5290156	3250	0.090	0.0456	No
22	DYRK1B	5860706	3519	0.076	0.0335	No
23	TP53	6130707	3540	0.075	0.0348	No
24	CAMKK2	5270047	3860	0.062	0.0196	No
25	SMARCD3	4070497	3998	0.058	0.0140	No
26	HNF4A	6620440	4142	0.053	0.0080	No
27	ELL3	1770484	4241	0.050	0.0043	No
28	GLI2	3060632	4406	0.046	-0.0031	No
29	FOXP3	940707 1850692	4525	0.043	-0.0081	No
30	PLAGL1	3190082 6200193	4597	0.041	-0.0107	No
31	ACVR1	6840671	4738	0.039	-0.0170	No
32	FOXO3	2510484 4480451	4783	0.038	-0.0182	No
33	THRAP3	6180309	4835	0.037	-0.0198	No
34	CITED2	5670114 5130088	4868	0.036	-0.0203	No
35	MAP2K3	5570193	5082	0.032	-0.0308	No
36	FOXE1	4810164	5098	0.032	-0.0306	No
37	UBE2N	520369 2900047	5562	0.026	-0.0548	No
38	CREB5	2320368	5656	0.024	-0.0590	No
39	UTF1	5700593	5824	0.023	-0.0674	No
40	IL4	6020537	6057	0.020	-0.0792	No
41	ACVRL1	3290600	6155	0.019	-0.0839	No
42	GLIS2	4150471 4810170	6309	0.018	-0.0916	No
43	TBX5	2900132 6370484	6316	0.018	-0.0913	No
44	NUFIP1	6350241	6390	0.017	-0.0947	No
45	CDK7	2640451	7752	0.009	-0.1680	No
46	NPAS2	770670	7804	0.009	-0.1704	No
47	RORB	6400035	7857	0.009	-0.1729	No
48	MKL2	5700204	8056	0.008	-0.1834	No
49	NRIP1	3190039	8083	0.008	-0.1845	No
50	FOXF2	1240091	8114	0.008	-0.1859	No
51	GATA4	1410215 2690609	8594	0.006	-0.2116	No
52	ABCA1	6290156	8669	0.006	-0.2154	No
53	HIF1A	5670605	8842	0.005	-0.2245	No
54	ESRRG	4010181	9935	0.002	-0.2835	No
55	EHF	4560088	9976	0.002	-0.2856	No
56	IRF4	610133	10272	0.001	-0.3015	No
57	SMARCA1	4230315	10479	0.001	-0.3126	No
58	EREG	50519 4920129	10683	0.000	-0.3235	No
59	ARNT2	1740594	11133	-0.001	-0.3478	No
60	BMP6	2100128	11286	-0.002	-0.3559	No
61	NCOA6	1780333 6450110	11459	-0.002	-0.3652	No
62	MYST4	1400563 2570687 3360458 6840402	11916	-0.004	-0.3897	No
63	GLI1	4560176	11972	-0.004	-0.3925	No
64	FOXD3	6550156	12005	-0.004	-0.3941	No
65	FOXH1	2060180	12354	-0.005	-0.4128	No
66	RGMB	670504 4570450	12529	-0.006	-0.4220	No
67	YWHAH	1660133 2810053	12889	-0.008	-0.4412	No
68	PAX8	5050301 5290164	13741	-0.014	-0.4867	No
69	PPARGC1A	4670040	13963	-0.016	-0.4982	No
70	BPTF	940541 4540152	14159	-0.019	-0.5081	No
71	CLOCK	1410070 2940292 3390075	14298	-0.021	-0.5149	No
72	NFATC2	70450 540097	14309	-0.021	-0.5148	No
73	RXRA	3800471	14505	-0.024	-0.5245	No
74	TCF3	5080022	14733	-0.029	-0.5359	No
75	NOTCH4	2450040 6370707	14957	-0.035	-0.5468	No
76	RAD51	6110450 6980280	15032	-0.039	-0.5496	No
77	GLIS1	840471	15182	-0.045	-0.5562	No
78	UBB	4810138	15183	-0.045	-0.5548	No
79	ELF4	4850193	15444	-0.057	-0.5670	No
80	HIVEP3	3990551	15632	-0.069	-0.5749	No
81	NARG1	5910563 6350095	15804	-0.081	-0.5816	No
82	BCL10	2360397	15829	-0.083	-0.5802	No
83	TRERF1	6370017 6940138	15841	-0.084	-0.5781	No
84	ERCC3	6900008	15992	-0.095	-0.5832	No
85	NSD1	4560519 4780672	16074	-0.102	-0.5843	No
86	YAF2	940053	16441	-0.141	-0.5996	No
87	PPARGC1B	3290114	16512	-0.152	-0.5985	No
88	MYO6	2190332	16625	-0.169	-0.5992	No
89	BCL3	3990440	16752	-0.187	-0.6000	Yes
90	MED6	6840500	16755	-0.187	-0.5941	Yes
91	SP1	6590017	16838	-0.205	-0.5920	Yes
92	ARNTL	3170463	16863	-0.209	-0.5867	Yes
93	PHF5A	2690519	16977	-0.228	-0.5855	Yes
94	TNFRSF1A	1090390 6520735	17180	-0.268	-0.5879	Yes
95	ILF2	2900253	17184	-0.270	-0.5794	Yes
96	SMAD2	4200592	17271	-0.295	-0.5746	Yes
97	MNAT1	730292 2350364	17289	-0.300	-0.5660	Yes
98	CREBBP	5690035 7040050	17381	-0.327	-0.5605	Yes
99	TCF4	520021	17388	-0.328	-0.5504	Yes
100	HNRPAB	540504	17390	-0.328	-0.5399	Yes
101	MAML1	2760008	17520	-0.360	-0.5354	Yes
102	GTF2H1	2570746 2650148	17587	-0.381	-0.5268	Yes
103	MED12	4920095	17715	-0.430	-0.5199	Yes
104	RSF1	1580097	17746	-0.443	-0.5074	Yes
105	RUNX1	3840711	18014	-0.563	-0.5039	Yes
106	ARHGEF11	1780288	18092	-0.610	-0.4885	Yes
107	CCNH	3190347	18256	-0.727	-0.4742	Yes
108	ATF7IP	2690176 6770021	18287	-0.759	-0.4516	Yes
109	SMARCC1	5080019 7100047	18369	-0.848	-0.4289	Yes
110	XRCC6	2850450 3870528	18427	-0.927	-0.4024	Yes
111	CTCF	5340017	18434	-0.936	-0.3728	Yes
112	ELF1	4780450	18546	-1.372	-0.3350	Yes
113	ILF3	940722 3190647 6520110	18599	-2.087	-0.2712	Yes
114	ATF4	730441 1740195	18600	-2.197	-0.2011	Yes
115	ARID1A	2630022 1690551 4810110	18616	-6.327	0.0000	Yes