Details for gene set CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	wtNotch
GeneSet	CELL_CYCLE_PROCESS
Enrichment Score (ES)	-0.6098636
Normalized Enrichment Score (NES)	-1.6515855
Nominal p-value	0.0
FDR q-value	0.13145944
FWER p-Value	0.613

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDK4	540075 4540600	42	2.101	0.0480	No
2	CDK10	60164 1190717 3130128 3990044	344	0.815	0.0512	No
3	MAD2L2	1240358	362	0.781	0.0690	No
4	CDKN2C	5050750 5130148	376	0.763	0.0865	No
5	BCAT1	3290128 4050408	394	0.736	0.1032	No
6	TARDBP	870390 2350093	938	0.419	0.0838	No
7	MSH5	1340019 4730333	962	0.415	0.0925	No
8	CHMP1A	5550441	1022	0.394	0.0987	No
9	CDC25B	6940102	1428	0.308	0.0842	No
10	MAP3K11	7000039	1620	0.273	0.0803	No
11	CHFR	3390050 6450300 6450736	2032	0.211	0.0631	No
12	POLD1	4830026	2120	0.200	0.0632	No
13	STAG3	3830112	2466	0.156	0.0482	No
14	E2F1	5360093	2480	0.155	0.0512	No
15	TGFB1	1940162	2566	0.146	0.0501	No
16	CDKN2D	6040035	2854	0.118	0.0374	No
17	NUMA1	6520576	3219	0.092	0.0199	No
18	BOLL	6100743	3227	0.092	0.0217	No
19	TOP3A	7000435	3437	0.080	0.0123	No
20	CDK6	4920253	3448	0.079	0.0137	No
21	RACGAP1	3990162 6620736	3563	0.074	0.0093	No
22	APBB1	2690338	3615	0.071	0.0082	No
23	CENTD2	60408 2510156 6100494	3642	0.070	0.0085	No
24	RAD54L	2970041	3737	0.067	0.0050	No
25	DCTN2	540471 3780717	4018	0.057	-0.0088	No
26	CUL2	4200278	4216	0.051	-0.0183	No
27	TPD52L1	4590711 5570575	4490	0.044	-0.0320	No
28	RCC1	2480358	4585	0.042	-0.0361	No
29	ACVR1	6840671	4738	0.039	-0.0434	No
30	DUSP13	6400152	4891	0.036	-0.0508	No
31	RAD1	4200551	5030	0.033	-0.0575	No
32	ANAPC11	1780601	5099	0.032	-0.0604	No
33	CDKN2B	6020040	5117	0.032	-0.0606	No
34	ANLN	1780113 2470537 6840047	5124	0.032	-0.0601	No
35	UBE2C	6130017	5158	0.031	-0.0612	No
36	CDCA5	5670131	5231	0.030	-0.0644	No
37	PLK1	1780369 2640121	5459	0.027	-0.0760	No
38	TBRG4	3610239 6370594	5520	0.026	-0.0786	No
39	CENPE	2850022	5930	0.021	-0.1003	No
40	NEK6	3360687	6249	0.019	-0.1171	No
41	PRMT5	2760180 4590072	6528	0.016	-0.1317	No
42	CUL5	450142	6562	0.016	-0.1331	No
43	DMC1	450341	6598	0.016	-0.1347	No
44	CLIP1	2850162 6770397	6821	0.014	-0.1463	No
45	PAFAH1B1	4230333 6420121 6450066	7240	0.012	-0.1687	No
46	NEK2	2120520	7736	0.010	-0.1953	No
47	KATNA1	6290048	7929	0.009	-0.2055	No
48	APBB2	5130403	7950	0.009	-0.2064	No
49	CETN1	6020056	7972	0.009	-0.2073	No
50	TTN	2320161 4670056 6550026	8482	0.007	-0.2347	No
51	CDKN3	110520	8494	0.007	-0.2352	No
52	TIMELESS	3710315	8546	0.006	-0.2378	No
53	KIF11	5390139	9250	0.004	-0.2758	No
54	NPM1	4730427	9497	0.003	-0.2890	No
55	POLA1	4760541	9613	0.003	-0.2952	No
56	MSH4	3940068	9626	0.003	-0.2957	No
57	BUB1	5390270	10161	0.002	-0.3246	No
58	EREG	50519 4920129	10683	0.000	-0.3528	No
59	CCNA1	6290113	10792	-0.000	-0.3587	No
60	MDM4	4070504 4780008	11307	-0.002	-0.3865	No
61	RAN	2260446 4590647	11821	-0.003	-0.4142	No
62	ANAPC10	870086 1170037 2260129	11836	-0.003	-0.4149	No
63	PAM	5290528	11858	-0.003	-0.4160	No
64	CENPF	5050088	11942	-0.004	-0.4204	No
65	SPO11	540288 4780239	12015	-0.004	-0.4242	No
66	TTK	3800129	12142	-0.004	-0.4309	No
67	KIF2C	6940082	12263	-0.005	-0.4373	No
68	RAD52	110093	12741	-0.007	-0.4630	No
69	EPGN	6980450	13267	-0.010	-0.4912	No
70	CHEK1	50167 1940300	13273	-0.010	-0.4912	No
71	NBN	730538 2470619 4780594	13305	-0.010	-0.4926	No
72	KIF15	610731 4070731 6520014	13401	-0.011	-0.4975	No
73	CDC23	3190593	13446	-0.011	-0.4996	No
74	CDKN1A	4050088 6400706	13471	-0.011	-0.5006	No
75	PIM2	840136 5720692 7100577	13667	-0.013	-0.5109	No
76	SYCP1	2570010	13740	-0.014	-0.5145	No
77	ATM	3610110 4050524	13898	-0.015	-0.5226	No
78	DCTN3	6840131	13908	-0.015	-0.5227	No
79	TUBE1	2360079 6520685	13920	-0.016	-0.5229	No
80	FBXO5	2630551	13931	-0.016	-0.5231	No
81	PML	50093 2190435 2450402 3840082	13951	-0.016	-0.5238	No
82	USH1C	1570372 4230364	14182	-0.019	-0.5358	No
83	CDC25C	2570673 4760161 6520707	14329	-0.021	-0.5432	No
84	CDKN1B	3800025 6450044	14515	-0.024	-0.5526	No
85	NPM2	6040139	14553	-0.025	-0.5540	No
86	SMC3	870546 1400411 5700039 6450577	14645	-0.027	-0.5583	No
87	TGFA	1570332	14731	-0.029	-0.5622	No
88	PIN1	2970408	14788	-0.031	-0.5645	No
89	DDX11	6590671	14823	-0.032	-0.5656	No
90	GFI1B	4570131	14934	-0.035	-0.5707	No
91	RAD51L1	4010112 5860435	14985	-0.037	-0.5725	No
92	RAD51	6110450 6980280	15032	-0.039	-0.5741	No
93	ACVR1B	3610446 5570195	15239	-0.047	-0.5841	No
94	BRCA2	4280372	15249	-0.047	-0.5835	No
95	CDK2	130484 2260301 4010088 5050110	15285	-0.049	-0.5842	No
96	TUBG1	3140204	15298	-0.049	-0.5837	No
97	RAD17	5220739	15306	-0.049	-0.5829	No
98	LATS2	4480593 6020494	15332	-0.051	-0.5830	No
99	NOLC1	2350195	15646	-0.070	-0.5983	No
100	GFI1	730180	15648	-0.070	-0.5967	No
101	PPP5C	3130047	15659	-0.071	-0.5955	No
102	KIF22	1190368	15776	-0.079	-0.5999	No
103	XRCC2	4920706	15777	-0.079	-0.5980	No
104	SSSCA1	1240402 780309	15875	-0.086	-0.6012	No
105	CUL4A	1170088 2320008 2470278	15889	-0.087	-0.5999	No
106	EGF	5220154	15914	-0.089	-0.5990	No
107	SMC4	5910240	15937	-0.091	-0.5980	No
108	CIT	2370601	15947	-0.091	-0.5964	No
109	SUGT1	1690670	15953	-0.092	-0.5944	No
110	RAD50	4050184 6770746	16046	-0.100	-0.5970	No
111	MYH10	2640673	16127	-0.107	-0.5988	No
112	CCNA2	5290075	16158	-0.110	-0.5978	No
113	CDK2AP1	2340156	16382	-0.134	-0.6067	Yes
114	STMN1	1990717	16393	-0.135	-0.6040	Yes
115	ABL1	1050593 2030050 4010114	16410	-0.138	-0.6015	Yes
116	RAD21	1990278	16495	-0.150	-0.6025	Yes
117	RAD51L3	2230609 2810286 3190008 3390053 4230168	16557	-0.159	-0.6020	Yes
118	KNTC1	430079	16683	-0.178	-0.6045	Yes
119	CD28	1400739 4210093	16693	-0.179	-0.6007	Yes
120	CDC16	1940706	16789	-0.194	-0.6012	Yes
121	BIRC5	110408 580014 1770632	16855	-0.207	-0.5998	Yes
122	KHDRBS1	1240403 6040040	16901	-0.215	-0.5971	Yes
123	DLG7	3120041	16935	-0.220	-0.5936	Yes
124	AURKA	780537	16964	-0.225	-0.5897	Yes
125	HSPA2	6420592	17069	-0.246	-0.5895	Yes
126	NDE1	1580242 3830097	17137	-0.260	-0.5869	Yes
127	LIG3	2940300	17221	-0.281	-0.5847	Yes
128	NDC80	4120465	17235	-0.283	-0.5786	Yes
129	ZWINT	6940670	17240	-0.284	-0.5720	Yes
130	PTPRC	130402 5290148	17327	-0.312	-0.5692	Yes
131	TIPIN	1570301 2480113	17515	-0.358	-0.5707	Yes
132	PCBP4	6350722	17598	-0.387	-0.5659	Yes
133	RB1	5900338	17613	-0.394	-0.5573	Yes
134	PPP6C	2450670	17626	-0.399	-0.5484	Yes
135	POLS	5890438	17665	-0.415	-0.5405	Yes
136	MPHOSPH6	5570164	17770	-0.450	-0.5354	Yes
137	POLE	6020538	17772	-0.451	-0.5246	Yes
138	ANAPC5	730164 7100685	17854	-0.485	-0.5174	Yes
139	ANAPC4	4540338	17861	-0.487	-0.5061	Yes
140	CUL1	1990632	17893	-0.503	-0.4957	Yes
141	SKP2	360711 380093 4810368	17931	-0.521	-0.4852	Yes
142	MRE11A	3850601 4670332	17933	-0.523	-0.4728	Yes
143	KPNA2	3450114	17970	-0.540	-0.4618	Yes
144	MAD2L1	4480725	18047	-0.583	-0.4520	Yes
145	NCAPH	6220435	18140	-0.637	-0.4417	Yes
146	AKAP8	4210026	18200	-0.672	-0.4288	Yes
147	BUB1B	1450288	18215	-0.685	-0.4132	Yes
148	GSPT1	5420050	18220	-0.689	-0.3969	Yes
149	TPX2	6420324	18266	-0.736	-0.3818	Yes
150	KIF23	5570112	18328	-0.792	-0.3661	Yes
151	ZW10	2900735 3520687	18335	-0.804	-0.3472	Yes
152	CETN3	3170402	18344	-0.816	-0.3281	Yes
153	PRC1	870092 5890204	18426	-0.927	-0.3103	Yes
154	CDC6	4570296 5360600	18471	-1.030	-0.2880	Yes
155	CUL3	1850520	18514	-1.160	-0.2626	Yes
156	SMC1A	3060600 5700148 5890113 6370154	18529	-1.261	-0.2331	Yes
157	CDKN1C	6520577	18557	-1.527	-0.1981	Yes
158	CDC7	4060546 4850041	18609	-2.689	-0.1365	Yes
159	NUSAP1	940048 3120435	18611	-2.829	-0.0688	Yes
160	CDKN2A	4670215 4760047	18612	-2.884	0.0002	Yes