Details for gene set SEQUENCE_SPECIFIC_DNA

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	SEQUENCE_SPECIFIC_DNA_BINDING
Enrichment Score (ES)	-0.7359379
Normalized Enrichment Score (NES)	-1.6526674
Nominal p-value	0.0
FDR q-value	0.44177786
FWER p-Value	0.354

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HMGA1	6580408	607	1.183	0.0333	No
2	TRIM28	380292	1694	0.488	0.0021	No
3	CXXC1	630170 3940136	3128	0.149	-0.0668	No
4	FOXL1	2850017	4068	0.073	-0.1133	No
5	FOXD4	2470315	4359	0.060	-0.1256	No
6	TINF2	2360358	4383	0.059	-0.1235	No
7	TBX3	2570672	4440	0.057	-0.1234	No
8	GLI2	3060632	5094	0.039	-0.1563	No
9	ORC2L	1990470 6510019	5567	0.030	-0.1801	No
10	TBX2	1990563	6023	0.023	-0.2033	No
11	KIF2C	6940082	7152	0.014	-0.2633	No
12	NR5A2	1690180 6900050	7393	0.012	-0.2755	No
13	ORC3L	3060348	7495	0.012	-0.2803	No
14	TBX5	2900132 6370484	7553	0.011	-0.2828	No
15	FIGLA	4780458	8087	0.009	-0.3110	No
16	PURA	3870156	9895	0.003	-0.4081	No
17	FOXC2	4150041	10406	0.002	-0.4355	No
18	BPTF	940541 4540152	10617	0.001	-0.4468	No
19	HMGA2	2940121 3390647 5130279 6400136	10643	0.001	-0.4481	No
20	TBX1	3710133 6590121	10914	0.000	-0.4626	No
21	NR0B1	6510750	11288	-0.001	-0.4826	No
22	SREBF1	4780333	11853	-0.003	-0.5129	No
23	FOXF2	1240091	11898	-0.003	-0.5151	No
24	MBD2	5900546	11972	-0.003	-0.5188	No
25	FOXH1	2060180	12169	-0.004	-0.5291	No
26	POT1	5340184	12312	-0.005	-0.5365	No
27	RORB	6400035	12356	-0.005	-0.5386	No
28	GCM2	2370041	12444	-0.005	-0.5429	No
29	FOXD1	6860053	12535	-0.006	-0.5475	No
30	TERT	6660075	12800	-0.007	-0.5613	No
31	TERF1	2340113	12802	-0.007	-0.5610	No
32	FOXC1	580239	12806	-0.007	-0.5608	No
33	FOXO3	2510484 4480451	13812	-0.016	-0.6140	No
34	ORC4L	4230538 5550288	14128	-0.021	-0.6298	No
35	TERF2IP	580010 870364 2190358	14906	-0.052	-0.6687	No
36	ORC5L	1940133 1940711	16076	-0.174	-0.7220	Yes
37	NR6A1	4010347	16300	-0.216	-0.7219	Yes
38	FOXP3	940707 1850692	16316	-0.219	-0.7105	Yes
39	SP1	6590017	16789	-0.347	-0.7166	Yes
40	LEF1	2470082 7100288	16790	-0.347	-0.6972	Yes
41	SMAD3	6450671	16940	-0.392	-0.6834	Yes
42	MBD4	7100373	17080	-0.441	-0.6663	Yes
43	HNRPAB	540504	17599	-0.684	-0.6560	Yes
44	SMG6	5820243	17640	-0.704	-0.6189	Yes
45	TERF2	3840044	17973	-0.957	-0.5833	Yes
46	SMAD4	5670519	18448	-1.916	-0.5020	Yes
47	ZW10	2900735 3520687	18502	-2.294	-0.3768	Yes
48	ELK3	460377 1400762 3710497	18570	-2.752	-0.2268	Yes
49	BCL6	940100	18610	-4.108	0.0003	Yes