Details for gene set SECRETION_BY

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	SECRETION_BY_CELL
Enrichment Score (ES)	-0.6168234
Normalized Enrichment Score (NES)	-1.4954687
Nominal p-value	0.005221932
FDR q-value	0.5825909
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CCL8	3870010	551	1.265	0.0195	No
2	APOA1	110152	1214	0.706	0.0113	No
3	RAB3A	3940288	1406	0.602	0.0244	No
4	NAPA	1780537 5720102	1940	0.418	0.0120	No
5	ARL4D	1570154	2018	0.390	0.0230	No
6	CADM1	6620128	2389	0.294	0.0145	No
7	ERGIC3	1400075 4780047	2499	0.265	0.0189	No
8	SNAP23	2480722 5390315	2887	0.183	0.0052	No
9	SCRN1	6040025 6580019	2972	0.169	0.0072	No
10	CCL3	2810092	2985	0.168	0.0131	No
11	COPZ1	6940100	3014	0.164	0.0180	No
12	SEPT5	460725	3380	0.119	0.0029	No
13	COPE	2340088 2640450 6620279	3483	0.110	0.0017	No
14	SCG2	5670438 130671	3599	0.100	-0.0006	No
15	VTI1B	3140364 6510497	3710	0.092	-0.0030	No
16	NMUR2	1580717	4066	0.073	-0.0193	No
17	ARFGEF1	6760494	4109	0.071	-0.0188	No
18	AKAP3	5890471	4115	0.071	-0.0163	No
19	KIF1C	2480484	4379	0.059	-0.0282	No
20	BACE2	4060170 5690100 6220133	4945	0.042	-0.0570	No
21	APOA2	6510364 6860411	5114	0.039	-0.0646	No
22	OPTN	3940041	5269	0.036	-0.0715	No
23	CANX	4760402	5561	0.030	-0.0860	No
24	RIMS1	5670022	5901	0.025	-0.1034	No
25	AP3B2	4670605	6031	0.023	-0.1094	No
26	CIDEA	4560020	6072	0.023	-0.1107	No
27	GRM4	6960092	6531	0.018	-0.1347	No
28	VAMP3	7100050	6559	0.018	-0.1355	No
29	NLRC4	5570332	7097	0.014	-0.1639	No
30	LIN7A	4540707 5270369	8147	0.009	-0.2202	No
31	PPY	2340373	8234	0.008	-0.2245	No
32	NLRP2	580750	9523	0.004	-0.2939	No
33	CADPS	2320181	9555	0.004	-0.2954	No
34	NLRP3	1980064 4010180	9931	0.003	-0.3155	No
35	BET1	4010725	9934	0.003	-0.3155	No
36	ABCA1	6290156	10074	0.002	-0.3229	No
37	COPB1	5390037	10505	0.001	-0.3461	No
38	EXOC5	7000711	10889	0.000	-0.3667	No
39	SEC22A	3800162 3840168 5220164 5290632	10932	-0.000	-0.3690	No
40	DNAJC1	6650066	11120	-0.001	-0.3791	No
41	GLMN	5290563 5890239	11202	-0.001	-0.3834	No
42	PKDREJ	4200088	11517	-0.002	-0.4003	No
43	STX16	70315	12083	-0.004	-0.4307	No
44	SYN3	3290427	12247	-0.004	-0.4393	No
45	NLGN1	5670278	12288	-0.005	-0.4413	No
46	TXNDC4	450537	12515	-0.006	-0.4532	No
47	CPLX1	2510735	12680	-0.006	-0.4618	No
48	SYT1	840364	12700	-0.006	-0.4626	No
49	CPLX2	6980538	12786	-0.007	-0.4669	No
50	ACHE	5290750	12979	-0.008	-0.4770	No
51	NMUR1	1500403	13099	-0.009	-0.4831	No
52	CARTPT	6660687	13495	-0.012	-0.5039	No
53	LTBP2	4850039	13501	-0.012	-0.5037	No
54	SNCAIP	4010551	13539	-0.013	-0.5052	No
55	COG2	5900129	13554	-0.013	-0.5055	No
56	SEC22B	3190278	14030	-0.019	-0.5304	No
57	CRTAM	4480110	14432	-0.029	-0.5509	No
58	RPH3AL	70110	14481	-0.031	-0.5523	No
59	NOD2	2510050	14872	-0.050	-0.5714	No
60	SYTL4	3060066	14894	-0.051	-0.5705	No
61	HRH3	6180040	15059	-0.061	-0.5769	No
62	SEC22C	1050600 6760050	15155	-0.068	-0.5794	No
63	LMAN1	3420068	15178	-0.070	-0.5779	No
64	RAB26	5910025	15291	-0.079	-0.5809	No
65	GOSR2	1850059 1980687 4590184	15574	-0.109	-0.5918	No
66	COG7	360133	15689	-0.121	-0.5933	No
67	ARFGEF2	5550500	16126	-0.181	-0.6098	Yes
68	STX18	4760706	16181	-0.193	-0.6052	Yes
69	FOXP3	940707 1850692	16316	-0.219	-0.6039	Yes
70	SCAMP3	2360707	16337	-0.223	-0.5963	Yes
71	TXNDC1	520398	16345	-0.225	-0.5879	Yes
72	ARFGAP3	3390717	16429	-0.244	-0.5828	Yes
73	COPG2	2370152	16647	-0.306	-0.5826	Yes
74	SCAMP2	430114	16677	-0.314	-0.5720	Yes
75	KCNMB4	3290347	17118	-0.459	-0.5778	Yes
76	PYCARD	2100750	17196	-0.490	-0.5629	Yes
77	ARFIP1	3130601	17218	-0.499	-0.5446	Yes
78	GOSR1	730279	17401	-0.579	-0.5319	Yes
79	NRBP1	1740750	17465	-0.617	-0.5112	Yes
80	COG3	3840746	17526	-0.644	-0.4894	Yes
81	COPB2	610154	17883	-0.876	-0.4745	Yes
82	SNAP29	6380239	17910	-0.907	-0.4406	Yes
83	RAB2A	2450358	18105	-1.119	-0.4074	Yes
84	RAB14	6860139	18184	-1.233	-0.3636	Yes
85	SCIN	5420180	18226	-1.318	-0.3145	Yes
86	STX7	5910484	18259	-1.384	-0.2623	Yes
87	ZW10	2900735 3520687	18502	-2.294	-0.1860	Yes
88	LMAN2L	50079 6590100 6650338	18532	-2.438	-0.0926	Yes
89	CCL5	3710397	18540	-2.493	0.0041	Yes