Details for gene set REGULATION_OF_ANATOMICAL_STRUCTURE

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	REGULATION_OF_ANATOMICAL_STRUCTURE_MORPHOGENESIS
Enrichment Score (ES)	0.80414057
Normalized Enrichment Score (NES)	1.4752127
Nominal p-value	0.018115941
FDR q-value	0.4518869
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MYH9	3120091 4850292	14	4.958	0.4031	Yes
2	APOE	4200671	203	2.021	0.5576	Yes
3	RTN4	50725 630647 870097 870184	236	1.892	0.7100	Yes
4	CDC42EP4	4150338	837	0.960	0.7559	Yes
5	CDC42	1240168 3440278 4480519 5290162	1574	0.535	0.7599	Yes
6	FGD2	5340195	1818	0.449	0.7834	Yes
7	FGD1	4780021	2022	0.389	0.8041	Yes
8	FGD6	610632	2615	0.236	0.7915	No
9	KLK8	60035 2340440	4215	0.066	0.7109	No
10	CDC42EP1	6550279 6370215 4060450 4590066	4807	0.046	0.6829	No
11	ROBO2	450136	4853	0.045	0.6841	No
12	FGD3	5690465	7001	0.015	0.5698	No
13	TAOK2	110575 6380692	7653	0.011	0.5357	No
14	SLIT2	1940037	9639	0.004	0.4292	No
15	ROBO1	3710398	11958	-0.003	0.3048	No
16	MAPT	360706 1230706	13208	-0.010	0.2384	No
17	FGD5	3520438 4060500	13957	-0.018	0.1997	No
18	CDC42EP5	6400397	13983	-0.019	0.1999	No
19	CENTD2	60408 2510156 6100494	14100	-0.021	0.1953	No
20	FGD4	520168 870411 2640253 6550338 6650364	14339	-0.026	0.1846	No
21	YWHAH	1660133 2810053	14807	-0.047	0.1633	No
22	CDC42EP2	540079 2970138	15160	-0.068	0.1500	No
23	AMIGO1	6180215	16015	-0.166	0.1176	No
24	THY1	5910162	16532	-0.273	0.1121	No