Details for gene set HYPOXIA

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	HYPOXIA_REVIEW
Enrichment Score (ES)	0.74497163
Normalized Enrichment Score (NES)	1.6415937
Nominal p-value	0.0048387097
FDR q-value	0.040579338
FWER p-Value	0.347

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PGK1	1570494 630300	11	5.024	0.1346	Yes
2	HMOX1	1740687	64	3.070	0.2144	Yes
3	APEX1	3190519	70	2.994	0.2947	Yes
4	IGF2	6510020	134	2.394	0.3557	Yes
5	PKM2	6520403 70500	160	2.217	0.4140	Yes
6	ENO1	5340128	161	2.215	0.4736	Yes
7	ALDOA	6290672	242	1.875	0.5197	Yes
8	CDKN1A	4050088 6400706	246	1.863	0.5697	Yes
9	MIF	3710332	391	1.500	0.6023	Yes
10	TGM2	5360452	502	1.326	0.6321	Yes
11	TFRC	4050551	596	1.200	0.6593	Yes
12	PFKL	6200167	661	1.110	0.6858	Yes
13	LDHA	2190594	944	0.881	0.6942	Yes
14	HK2	2640722	1283	0.665	0.6939	Yes
15	SLC2A3	1990377	1432	0.592	0.7019	Yes
16	SPP1	2470609	1451	0.584	0.7166	Yes
17	COL5A1	2230050	1474	0.572	0.7308	Yes
18	ADM	4810121	1657	0.502	0.7345	Yes
19	TGFB1	1940162	1706	0.484	0.7450	Yes
20	NFKB1	5420358	1928	0.422	0.7444	No
21	BHLHB2	7040603	2302	0.317	0.7328	No
22	PLAUR	5910280	2429	0.284	0.7337	No
23	TFF3	1580129	2494	0.265	0.7374	No
24	CDKN1B	3800025 6450044	2587	0.243	0.7389	No
25	SLC2A1	2100609	2733	0.208	0.7367	No
26	TGFB3	1070041	2790	0.197	0.7390	No
27	VIM	20431	2895	0.181	0.7383	No
28	EPAS1	5290156	3671	0.095	0.6991	No
29	PGF	4810593	3817	0.086	0.6936	No
30	FLT1	3830167 4920438	5147	0.038	0.6229	No
31	HK1	4280402	5714	0.028	0.5932	No
32	STC1	360161	5992	0.024	0.5789	No
33	EPO	940180	6410	0.019	0.5569	No
34	GAPDH	110022 430039 6220161	6478	0.019	0.5538	No
35	CCL2	4760019	6494	0.019	0.5535	No
36	FGF3	4230685	6737	0.017	0.5409	No
37	CP	2570484	7148	0.014	0.5191	No
38	FOS	1850315	7390	0.012	0.5065	No
39	TEK	6350541	8601	0.007	0.4414	No
40	TH	2100056	8781	0.006	0.4319	No
41	ENPEP	130373	8849	0.006	0.4285	No
42	ANGPT2	1230458 5720706 6040605	8928	0.006	0.4244	No
43	PTGS2	2510301 3170369	9010	0.005	0.4202	No
44	MMP13	510471 3940097	9175	0.005	0.4115	No
45	EDN2	6760647	9269	0.005	0.4066	No
46	HIF1A	5670605	9787	0.003	0.3788	No
47	TAGLN	6660280	10269	0.002	0.3529	No
48	XRCC5	7100286	10319	0.002	0.3504	No
49	BNIP3	3140270	10327	0.002	0.3500	No
50	IGFBP1	5720435	10500	0.001	0.3408	No
51	IGFBP3	2370500	11032	-0.000	0.3122	No
52	HGF	3360593	11642	-0.002	0.2794	No
53	EDN1	1770047	12188	-0.004	0.2501	No
54	F3	2940180	12655	-0.006	0.2252	No
55	HDAC9	1990010 2260133	13034	-0.008	0.2050	No
56	TGFA	1570332	13191	-0.009	0.1968	No
57	IGFBP2	5220563	13387	-0.011	0.1866	No
58	IL6	380133	13456	-0.012	0.1833	No
59	L1CAM	4850021	13818	-0.016	0.1642	No
60	JUN	840170	13846	-0.016	0.1632	No
61	LRP8	3610746 5360035	14160	-0.022	0.1469	No
62	PRPS1	6350129	14698	-0.040	0.1191	No
63	PDGFB	3060440 6370008	15328	-0.083	0.0874	No
64	P4HA1	2630692	15364	-0.087	0.0878	No
65	BNIP3L	1940347	16639	-0.303	0.0273	No
66	DDIT3	780373	16773	-0.341	0.0293	No
67	SAT1	4570463	16922	-0.387	0.0318	No
68	PFKP	70138 6760040 1170278	17534	-0.650	0.0163	No
69	CCNG2	3190095	17629	-0.698	0.0300	No
70	XRCC6	2850450 3870528	17862	-0.861	0.0407	No