Details for gene set HSC_INTERMEDIATEPROGENITORS

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	HSC_INTERMEDIATEPROGENITORS_SHARED
Enrichment Score (ES)	0.7022185
Normalized Enrichment Score (NES)	1.5854497
Nominal p-value	0.0
FDR q-value	0.09889006
FWER p-Value	0.812

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HES6	540411 6550504	13	4.961	0.0967	Yes
2	APEX1	3190519	70	2.994	0.1524	Yes
3	SDC4	6370411	94	2.683	0.2039	Yes
4	KLHDC4	870288 5900092	163	2.207	0.2435	Yes
5	C12ORF10	4120324 5270113	165	2.202	0.2867	Yes
6	MAPRE2	1660435 5860403	175	2.141	0.3283	Yes
7	BID	4590592 6130008	208	1.985	0.3655	Yes
8	PLAC8	2900019	217	1.948	0.4033	Yes
9	ALDOA	6290672	242	1.875	0.4388	Yes
10	PTCD2	1230088 1400605 3170576 6200609	385	1.522	0.4610	Yes
11	GALK1	840162	408	1.475	0.4888	Yes
12	SDF2L1	4230446	425	1.453	0.5165	Yes
13	NPC2	2350102	534	1.280	0.5357	Yes
14	GTF3A	2340451	555	1.261	0.5594	Yes
15	TBRG4	3610239 6370594	570	1.247	0.5831	Yes
16	EEF1B2	4850400 6130161	638	1.140	0.6019	Yes
17	MRPL12	3120112	750	1.030	0.6161	Yes
18	ITGB4BP	1400541	894	0.919	0.6265	Yes
19	CHCHD4	2680075	912	0.905	0.6433	Yes
20	WDR34	6100215	925	0.894	0.6602	Yes
21	ERCC8	1240300 6450372 6590180	1063	0.804	0.6686	Yes
22	MRPS25	610441 870128 1410368	1650	0.505	0.6469	Yes
23	APIP	2480440 2810471	1790	0.458	0.6484	Yes
24	DHX37	1400309	1898	0.429	0.6511	Yes
25	SSR2	5390180	1959	0.411	0.6559	Yes
26	DBI	1090706	1988	0.399	0.6622	Yes
27	DDX52	2970411	1990	0.398	0.6700	Yes
28	THOC5	4570047	2002	0.393	0.6771	Yes
29	GMPPA	520450 3120497	2026	0.388	0.6835	Yes
30	MRPS35	2370603 4070551	2172	0.351	0.6825	Yes
31	TCN2	2810139	2323	0.312	0.6806	Yes
32	CPA3	610242 6380102	2333	0.309	0.6861	Yes
33	POLR3E	380152	2456	0.279	0.6850	Yes
34	ATP6V1F	5420082	2476	0.271	0.6893	Yes
35	GPT2	1850463	2505	0.263	0.6930	Yes
36	PES1	2470427	2548	0.253	0.6957	Yes
37	CTSZ	1500687 1690364	2578	0.245	0.6989	Yes
38	COMMD10	3120451	2764	0.202	0.6929	Yes
39	GFM1	6220711	2767	0.201	0.6967	Yes
40	RSU1	4850372	2788	0.198	0.6995	Yes
41	SURF6	3060451	2840	0.190	0.7005	Yes
42	TEX2	1740504 2480102 3060494	2876	0.184	0.7022	Yes
43	LMAN2	430154	3122	0.149	0.6919	No
44	ATP6AP2	4010059 5080315 7100347 6660484	3353	0.121	0.6819	No
45	SIGLEC5	5690398	3355	0.121	0.6842	No
46	POLR3C	6940546	3509	0.108	0.6781	No
47	CEBPZ	2970053 2680068	5157	0.038	0.5899	No
48	CITED2	5670114 5130088	5161	0.038	0.5905	No
49	GPR180	5390711	5249	0.036	0.5865	No
50	AP3S2	2630411 5080053	5468	0.032	0.5754	No
51	MAPKAPK3	630520	5500	0.031	0.5743	No
52	CDADC1	3710201 4120064	6115	0.022	0.5416	No
53	DTX4	4120433	6288	0.020	0.5327	No
54	TNS3	6380242	6425	0.019	0.5258	No
55	NEBL	1850369 2480286	6833	0.016	0.5041	No
56	C5ORF14	3780050	7078	0.014	0.4912	No
57	MAOA	1410039 4610324	7153	0.014	0.4875	No
58	NAT12	1780092 4730370	7374	0.012	0.4759	No
59	GCNT3	6290239	7449	0.012	0.4721	No
60	PLAA	60706 6370369	7467	0.012	0.4714	No
61	RASSF4	510372 1660673 6290040	8434	0.008	0.4194	No
62	GYS1	540154	9913	0.003	0.3397	No
63	BET1	4010725	9934	0.003	0.3387	No
64	AS3MT	1570064 2350113	10438	0.001	0.3116	No
65	ELOVL3	6860050	11133	-0.001	0.2741	No
66	CUL5	450142	12053	-0.004	0.2246	No
67	TXNDC4	450537	12515	-0.006	0.1998	No
68	MDH1	6660358 6760731	12968	-0.008	0.1756	No
69	AHCY	4230605	13382	-0.011	0.1535	No
70	HDGF	5130114 5420066 6590152	13419	-0.011	0.1518	No
71	RPN1	1240113	14045	-0.020	0.1185	No
72	NIPSNAP3B	630672 3710091 4540288 4780576	14537	-0.033	0.0926	No
73	D4ST1	1780671	14686	-0.040	0.0854	No
74	NUP37	2370097 6370435 6380008	15360	-0.086	0.0508	No
75	PCCA	3390400	15586	-0.110	0.0408	No
76	SFXN4	60750 4560059	15650	-0.117	0.0397	No
77	PAPSS2	870113	15764	-0.130	0.0361	No
78	STATIP1	4480022 6940097	16090	-0.176	0.0220	No
79	DYNLL1	5570113	16284	-0.213	0.0158	No
80	DDX20	3290348	16325	-0.221	0.0180	No
81	SNUPN	5050131	16455	-0.251	0.0160	No
82	CFDP1	7000112	16562	-0.280	0.0157	No
83	BLOC1S2	1240215	16884	-0.374	0.0057	No
84	SCARB1	510441 6770047	16981	-0.408	0.0086	No
85	PYCARD	2100750	17196	-0.490	0.0066	No
86	PFKP	70138 6760040 1170278	17534	-0.650	0.0012	No
87	SCIN	5420180	18226	-1.318	-0.0102	No
88	CASP7	4210156	18333	-1.590	0.0153	No