Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	-0.6479641
Normalized Enrichment Score (NES)	-1.6787513
Nominal p-value	0.0
FDR q-value	0.009800739
FWER p-Value	0.083

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TEF	1050050 3120397 4060487	127	1.549	0.0260	No
2	GNAS	630441 1850373 4050152	159	1.366	0.0534	No
3	PLCG2	5720008	383	0.883	0.0600	No
4	EEF1B2	4850400 6130161	473	0.779	0.0718	No
5	ISGF3G	3190131 7100142	1149	0.415	0.0440	No
6	CHD4	5420059 6130338 6380717	1150	0.415	0.0528	No
7	BAX	3830008	1345	0.365	0.0500	No
8	MRPL27	2060131	1462	0.337	0.0509	No
9	SCYL1	5050717	1775	0.279	0.0399	No
10	HTATIP	5360739	1805	0.276	0.0442	No
11	RANBP1	430215 1090180	1816	0.274	0.0495	No
12	MYST3	5270500	1991	0.244	0.0452	No
13	DHX35	1230440	2264	0.207	0.0349	No
14	OPRS1	6130128 6290717	2453	0.180	0.0285	No
15	ALG1	2570112	2484	0.175	0.0306	No
16	TAF6L	1850056	2512	0.171	0.0328	No
17	EPC1	1570050 5290095 6900193	2790	0.135	0.0206	No
18	GNB2	2350053	2818	0.132	0.0220	No
19	RAB24	520601 4540739	2897	0.125	0.0204	No
20	RBBP4	6650528	3014	0.113	0.0165	No
21	CLN3	780368	3067	0.108	0.0160	No
22	VPS33A	780113	3137	0.101	0.0144	No
23	ZNF318	5890091 6130021	3235	0.094	0.0111	No
24	AKAP10	2630504 5910577	3304	0.089	0.0093	No
25	EIF3S10	1190079 3840176	3676	0.069	-0.0093	No
26	TSC1	1850672	3686	0.068	-0.0084	No
27	SLC12A6	610278 1980035 5340671	3704	0.067	-0.0078	No
28	COPZ1	6940100	3756	0.065	-0.0092	No
29	NFX1	450504	3786	0.064	-0.0095	No
30	HOXB7	4540706 4610358	3802	0.063	-0.0089	No
31	SGOL1	1980075 5220092 6020711	3862	0.061	-0.0108	No
32	HMGN2	3140091	3895	0.060	-0.0113	No
33	GABARAP	1450286	4120	0.052	-0.0223	No
34	TESK2	6520524	4162	0.051	-0.0235	No
35	POLR3C	6940546	4275	0.048	-0.0285	No
36	NEUROD1	3060619	4321	0.047	-0.0300	No
37	GTF2H1	2570746 2650148	4577	0.040	-0.0429	No
38	OPRD1	4280138	4660	0.038	-0.0466	No
39	NRIP3	1340372	4784	0.036	-0.0525	No
40	MCOLN1	4480563	4961	0.033	-0.0613	No
41	ESR2	6220138	5309	0.027	-0.0796	No
42	DNMT3A	4050068 4810717	5549	0.024	-0.0921	No
43	RAB3IL1	380685 5420176	5683	0.022	-0.0988	No
44	GGN	1410528 4210082 5290170	5777	0.021	-0.1034	No
45	PHC3	4920332	5832	0.021	-0.1059	No
46	MCM2	5050139	5911	0.020	-0.1097	No
47	RNF146	1660735	6047	0.018	-0.1166	No
48	GTF2A1	4120138 4920524 5390110 1230397	6140	0.018	-0.1212	No
49	HOXB5	2900538	6224	0.017	-0.1254	No
50	ELAVL3	2850014	6749	0.013	-0.1535	No
51	RAD9A	110300 1940632 3990390 6040014	6843	0.013	-0.1583	No
52	TOM1L2	4810465	6856	0.012	-0.1587	No
53	RGL1	1500097 6900450	6979	0.012	-0.1650	No
54	IRS4	430341 1190450	7432	0.010	-0.1893	No
55	ODC1	5670168	7435	0.010	-0.1893	No
56	FSHR	610041 7040121	7473	0.009	-0.1911	No
57	GATA5	430465	7505	0.009	-0.1925	No
58	SYT3	6380017	7618	0.009	-0.1984	No
59	SEPT3	3830022 5290079	7624	0.009	-0.1985	No
60	HOXC5	1580017	7873	0.008	-0.2118	No
61	VPS16	430064 3390041 6860301	7984	0.008	-0.2176	No
62	SLC26A2	2360278	8268	0.007	-0.2328	No
63	BMP4	380113	8286	0.007	-0.2336	No
64	BHLHB3	3450438	8523	0.006	-0.2463	No
65	CPT1A	6350093	8604	0.006	-0.2505	No
66	FMR1	5050075	8609	0.006	-0.2506	No
67	BDNF	2940128 3520368	8662	0.005	-0.2533	No
68	SLC1A7	1990181	8861	0.005	-0.2639	No
69	DUSP7	2940309	8905	0.005	-0.2662	No
70	SLC36A1	5080242	8909	0.005	-0.2662	No
71	CGN	5890139 6370167 6400537	9008	0.004	-0.2714	No
72	DVL2	6110162	9180	0.004	-0.2806	No
73	PCDHA10	3830725	9439	0.003	-0.2946	No
74	HOXD10	6100039	10163	0.001	-0.3337	No
75	HOXA11	6980133	10256	0.001	-0.3387	No
76	UTY	5890441	11029	-0.001	-0.3805	No
77	KIAA1715	1190551	11110	-0.001	-0.3849	No
78	NDUFS1	2650253	11113	-0.001	-0.3849	No
79	XPO1	540707	11119	-0.001	-0.3852	No
80	ADAM10	3780156	11267	-0.002	-0.3931	No
81	USP15	610592 3520504	11378	-0.002	-0.3991	No
82	HOXA9	610494 4730040 5130601	11542	-0.002	-0.4078	No
83	UBE2B	4780497	11557	-0.002	-0.4086	No
84	ARMET	5130670	11639	-0.003	-0.4129	No
85	HOXA1	1190524 5420142	11643	-0.003	-0.4130	No
86	CUL5	450142	11747	-0.003	-0.4185	No
87	PPP1R3C	2640170	11811	-0.003	-0.4219	No
88	AP1S2	780279 4280707	11866	-0.003	-0.4247	No
89	TRIM37	5270091	12088	-0.004	-0.4366	No
90	ETV1	70735 2940603 5080463	12126	-0.004	-0.4386	No
91	SET	6650286	12246	-0.004	-0.4449	No
92	ARPC5	1740411 3450300	12353	-0.005	-0.4506	No
93	NPM1	4730427	12422	-0.005	-0.4541	No
94	POGK	5290315	12449	-0.005	-0.4554	No
95	GLA	4610364	12532	-0.006	-0.4598	No
96	HNRPH2	2630040 5720671	12706	-0.006	-0.4690	No
97	NPTX1	3710736	12862	-0.007	-0.4773	No
98	RARG	6760136	12988	-0.008	-0.4839	No
99	AKAP1	110148 1740735 2260019 7000563	13050	-0.008	-0.4870	No
100	FOXD3	6550156	13826	-0.014	-0.5288	No
101	JMJD2C	3290341	13916	-0.015	-0.5333	No
102	SC5DL	6650390	13986	-0.016	-0.5367	No
103	HOXA7	5910152	14071	-0.017	-0.5409	No
104	HNRPD	4120021	14081	-0.017	-0.5410	No
105	SUMF1	730050	14482	-0.025	-0.5622	No
106	SNX5	1570021 6860609	14485	-0.025	-0.5617	No
107	FEN1	1770541	14640	-0.029	-0.5695	No
108	DIRC2	2810494	14667	-0.031	-0.5702	No
109	BRDT	3940102	14820	-0.036	-0.5777	No
110	SSR1	5890100	14866	-0.037	-0.5794	No
111	EIF4E	1580403 70133 6380215	14918	-0.039	-0.5813	No
112	TOM1	940398 2190053	14928	-0.040	-0.5809	No
113	APEX1	3190519	15039	-0.045	-0.5859	No
114	PICALM	1940280	15058	-0.046	-0.5859	No
115	RPL13A	2680519 5700142	15299	-0.059	-0.5977	No
116	DUSP1	6860121	15329	-0.061	-0.5980	No
117	MTCH2	3780603 6620215	15440	-0.068	-0.6025	No
118	RAI14	770288 1660075	15743	-0.091	-0.6169	No
119	RBBP6	2320129	15752	-0.092	-0.6154	No
120	UBXD3	5050193	15786	-0.095	-0.6151	No
121	OSGEP	5700239	15794	-0.096	-0.6135	No
122	SLC31A2	1450577	15816	-0.097	-0.6126	No
123	SMYD4	2640403	15847	-0.099	-0.6121	No
124	TNRC15	6760746	15849	-0.100	-0.6100	No
125	COMMD8	5890358	15911	-0.106	-0.6111	No
126	PER1	3290315	15912	-0.106	-0.6088	No
127	ZFYVE26	6860152	16007	-0.118	-0.6114	No
128	GPX1	4150093	16023	-0.119	-0.6097	No
129	HSPBAP1	4060022	16343	-0.160	-0.6236	No
130	PFDN2	4230156	16794	-0.252	-0.6426	Yes
131	SIRT1	1190731	16815	-0.257	-0.6382	Yes
132	HOXB4	540131	16867	-0.269	-0.6353	Yes
133	ZCCHC7	6510592	16905	-0.276	-0.6314	Yes
134	ATIC	4010593 6380463	16943	-0.287	-0.6274	Yes
135	MAX	5220021	17024	-0.309	-0.6251	Yes
136	NUDC	4780025	17216	-0.359	-0.6279	Yes
137	EIF4B	5390563 5270577	17244	-0.369	-0.6215	Yes
138	SLC38A2	1470242 3800026	17287	-0.378	-0.6157	Yes
139	PRPS1	6350129	17310	-0.387	-0.6087	Yes
140	LAMP1	2470524	17329	-0.395	-0.6013	Yes
141	STX6	4850750 6770278	17338	-0.398	-0.5933	Yes
142	ATP6V1A	6590242	17388	-0.416	-0.5871	Yes
143	PPM1A	1170301 5900273	17394	-0.418	-0.5785	Yes
144	GSK3B	5360348	17444	-0.435	-0.5719	Yes
145	NIT1	1230338 3940671	17475	-0.447	-0.5640	Yes
146	EIF4G1	4070446	17543	-0.470	-0.5577	Yes
147	HPS3	6650348	17581	-0.489	-0.5493	Yes
148	TFRC	4050551	17586	-0.491	-0.5391	Yes
149	UTX	2900017 6770452	17610	-0.499	-0.5297	Yes
150	RPA1	360452	17702	-0.539	-0.5232	Yes
151	STMN1	1990717	17737	-0.551	-0.5133	Yes
152	AATF	5220575	17819	-0.586	-0.5052	Yes
153	ALDH6A1	1770746	17842	-0.598	-0.4937	Yes
154	IGF2R	1570402	17847	-0.602	-0.4812	Yes
155	COMMD3	2510259	17886	-0.619	-0.4701	Yes
156	DCTN4	3390010 5550170	17926	-0.639	-0.4586	Yes
157	TOPORS	4060592	17929	-0.640	-0.4451	Yes
158	HTF9C	3190048 4120132	17939	-0.645	-0.4319	Yes
159	KBTBD2	2320014	17959	-0.655	-0.4190	Yes
160	GNA13	4590102	17993	-0.677	-0.4064	Yes
161	HMOX1	1740687	18055	-0.714	-0.3945	Yes
162	MORF4L2	6450133	18097	-0.750	-0.3808	Yes
163	DDX3X	2190020	18098	-0.751	-0.3649	Yes
164	CCAR1	3190092	18130	-0.771	-0.3501	Yes
165	PTMA	5570148	18194	-0.827	-0.3360	Yes
166	TIMM8A	110279	18242	-0.875	-0.3199	Yes
167	BRD2	1450300 5340484 6100605	18382	-1.053	-0.3051	Yes
168	AKAP12	1450739	18414	-1.125	-0.2829	Yes
169	CSRP2BP	4570717 5550333	18420	-1.140	-0.2589	Yes
170	CD164	3830594	18504	-1.406	-0.2335	Yes
171	ATF7IP	2690176 6770021	18529	-1.539	-0.2021	Yes
172	ATF4	730441 1740195	18536	-1.582	-0.1688	Yes
173	U2AF2	450600 4670128 5420292	18568	-1.982	-0.1284	Yes
174	UBE4B	780008 3610154	18570	-1.996	-0.0860	Yes
175	ILF3	940722 3190647 6520110	18576	-2.079	-0.0421	Yes
176	BOK	1170373 5860446	18579	-2.083	0.0020	Yes