DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#truncNotch_versus_absentNotch
Phenotypephenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in classabsentNotch
GeneSetTTTGTAG,MIR-520D
Enrichment Score (ES)-0.6343256
Normalized Enrichment Score (NES)-1.7257675
Nominal p-value0.0
FDR q-value0.005798735
FWER p-Value0.024
Table: GSEA Results Summary



Fig 1: Enrichment plot: TTTGTAG,MIR-520D   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HES14810280692.0420.0320No
2ATXN23940017 48102421101.6300.0583No
3ETV51100171451.4430.0818No
4UBE2E32030347 38404713220.9560.0889No
5TUSC215802538530.5150.0691No
6RCE1198037210100.4600.0686No
7ARRDC1485009510950.4330.0716No
8CUEDC1166046312620.3840.0693No
9VAMP2210010013120.3720.0732No
10TXN2203040214290.3470.0729No
11CCND1460524 770309 3120576 698039814870.3310.0756No
12HES5492002615210.3250.0795No
13FKBP1A245036821110.2280.0515No
14SCD268044122030.2160.0503No
15U2AF1513029223080.1990.0481No
16SON3120148 5860239 704040323640.1920.0485No
17MTF25033323830.1890.0508No
18SEMA4G589002626430.1550.0394No
19MDM1510528 1780280 2680152 2690181 3060025 3120487 4210601 4540037 4610142 5290110 6400433 648074329350.1200.0257No
20CDC42BPB635003730560.1090.0211No
21NEUROG138034132750.0910.0108No
22EGR3694012833560.0860.0079No
23HNRPA0268004833930.0840.0074No
24PPP1CB3130411 3780270 415018036430.070-0.0049No
25EIF3S101190079 384017636760.069-0.0054No
26LRBA345040237050.067-0.0058No
27CPEB2476033838150.063-0.0106No
28DCAMKL1540095 269009238600.061-0.0119No
29GADD45A290071741520.051-0.0269No
30SOCS53830398 710009341880.050-0.0279No
31PHF63120632 399004143350.046-0.0350No
32KDELR1676050443940.045-0.0374No
33DDIT4L337029244650.043-0.0404No
34CDH2520435 2450451 2760025 665047744880.042-0.0409No
35ETS15270278 6450717 662046545030.042-0.0409No
36RDX4200039 655046546520.038-0.0483No
37SDC2198016846730.038-0.0487No
38NEBL1850369 248028651570.029-0.0745No
39SCN3A407030952480.027-0.0789No
40LRCH45220279 651002652790.027-0.0801No
41RKHD3618047153680.026-0.0844No
42ZZZ3780133 2320239 2640452 5080706 655034154460.025-0.0882No
43NHLH2620002154580.025-0.0884No
44LRRN1329015454840.024-0.0893No
45ENAH1690292 570030055570.024-0.0928No
46BTBD31980041 2510577 3190053 420074656170.023-0.0956No
47GAD12360035 314016756190.023-0.0953No
48RFX3520121 4280519 5570519 610018456320.023-0.0955No
49PIWIL4318047158450.020-0.1067No
50COCH109013659910.019-0.1143No
51CASP8AP2591059360840.018-0.1190No
52CNTNAP2360170 428054661070.018-0.1198No
53ZFHX4611016761490.018-0.1218No
54HOXB5290053862240.017-0.1255No
55ATXN1555015663100.016-0.1298No
56GRM3454024263620.016-0.1323No
57HOXB6421073965160.015-0.1404No
58MAP3K238027066210.014-0.1458No
59PHLPP344056370080.012-0.1666No
60JMJD1C940575 212002570440.011-0.1683No
61ACTL6A5220543 6290541 2450093 4590332 527072270730.011-0.1697No
62GPM6A1660044 275015272460.011-0.1788No
63RFX154037372540.010-0.1790No
64RFX43710100 534021574010.010-0.1868No
65DKK2361043374130.010-0.1872No
66ODC1567016874350.010-0.1882No
67OSBPL10198018475760.009-0.1957No
68SOX163002677150.009-0.2030No
69FBN25043578620.008-0.2108No
70EIF2C1690055180270.007-0.2196No
71GABRA113037281900.007-0.2283No
72KCNK1105006882400.007-0.2309No
73ARL4A629009182750.007-0.2326No
74FOSL143002183170.006-0.2347No
75BHLHB3345043885230.006-0.2458No
76PTPN213031585750.006-0.2485No
77LPP166054187400.005-0.2573No
78CRHBP542018188820.005-0.2649No
79PRDM13170347 352030189610.004-0.2691No
80TLOC1405030989790.004-0.2699No
81NRXN31400546 336047190060.004-0.2713No
82SYNPR281040090320.004-0.2725No
83HDGFRP3618045190620.004-0.2740No
84STX1261045191930.004-0.2811No
85KLF11684073992320.004-0.2831No
86SLITRK3591004192610.004-0.2845No
87PTN591016193340.003-0.2884No
88MTSS1780435 237011494210.003-0.2930No
89PURA387015694260.003-0.2932No
90DACH12450593 570059294570.003-0.2948No
91ABCA1629015695950.003-0.3022No
92CHES14570121 570016296270.003-0.3038No
93SYT184036496460.003-0.3047No
94ABCC12555002696500.003-0.3049No
95GPM6B622045899510.002-0.3212No
96CBX470332100590.002-0.3270No
97TBC1D15870673100780.001-0.3279No
98NR5A21690180 6900050101440.001-0.3314No
99NOPE380156104300.001-0.3469No
100FBXO224760010104820.000-0.3497No
101SP43850176105220.000-0.3518No
102TAL17040239106200.000-0.3571No
103KIF115390139106680.000-0.3596No
104SRC58013210877-0.001-0.3710No
105TRPC4604002210909-0.001-0.3726No
106SERTAD22810673 684045010956-0.001-0.3751No
107SEH1L459056311065-0.001-0.3810No
108POLR2B378013811091-0.001-0.3823No
109PPP3CA4760332 676009211156-0.001-0.3858No
110NEUROG2542027811185-0.001-0.3873No
111SBF2306031511284-0.002-0.3926No
112PDZRN3234013111351-0.002-0.3962No
113GTPBP12230541 456052811388-0.002-0.3981No
114PFN2730040 570002611440-0.002-0.4008No
115KLF121660095 4810288 5340546 652028611455-0.002-0.4015No
116SNF1LK611040311550-0.002-0.4066No
117TEAD1247055111588-0.002-0.4086No
118PDCL234034811667-0.003-0.4128No
119MAFF4850577 572028611787-0.003-0.4192No
120ABHD3237009111839-0.003-0.4219No
121IER5235057511913-0.003-0.4259No
122TIPARP5039712046-0.004-0.4330No
123ADD11500176 3060139 339009212153-0.004-0.4387No
124HOXD3645015412260-0.005-0.4444No
125SLC35F1385016412659-0.006-0.4659No
126TMEM47166008612663-0.006-0.4660No
127KCNMA1145040212686-0.006-0.4671No
128PRPF4B940181 257030012696-0.006-0.4674No
129POU4F22120195 257002212715-0.006-0.4683No
130MEF2C670025 78033812780-0.007-0.4717No
131GIPC2380046312781-0.007-0.4716No
132NPTX1371073612862-0.007-0.4758No
133FMN245046312944-0.007-0.4801No
134USP3378004712960-0.008-0.4807No
135NDFIP1198040212963-0.008-0.4807No
136RSBN1700048712985-0.008-0.4817No
137LIN28659067213088-0.008-0.4871No
138ADCYAP152008613233-0.009-0.4948No
139SP3384033813383-0.010-0.5028No
140NPAS42320204 415015413425-0.010-0.5048No
141QKI5220093 613004413435-0.010-0.5051No
142SNAP2536052013587-0.011-0.5131No
143UBE3A1240152 2690438 586060913717-0.013-0.5199No
144DAPK1557001013837-0.014-0.5262No
145RPS6KB11450427 5080110 620056313918-0.015-0.5303No
146BIVM604054613943-0.015-0.5313No
147UBQLN2430397 1170594 407012113959-0.015-0.5319No
148HOXA7591015214071-0.017-0.5376No
149PPARGC1A467004014182-0.019-0.5433No
150GNAO12510292 659048714218-0.019-0.5448No
151PTP4A113069214223-0.019-0.5447No
152SLC1A3150007014246-0.020-0.5456No
153SERPINF22470390 269029214251-0.020-0.5454No
154PIP5K3536011214260-0.020-0.5455No
155HTR7268017614293-0.021-0.5469No
156RNF12686071714379-0.022-0.5511No
157WASF2485059214490-0.025-0.5567No
158USP47264049714584-0.028-0.5613No
159CLNS1A2970022 319040214672-0.031-0.5655No
160ZNF22780546 232013114731-0.032-0.5680No
161SLITRK2264002014757-0.033-0.5688No
162RANBP2428033814838-0.036-0.5725No
163TCF7L22190348 522011314857-0.037-0.5729No
164SLC35F5236036914943-0.041-0.5768No
165SOX1161027914979-0.043-0.5779No
166CSTF33850156 557045814998-0.044-0.5782No
167DNAJC64590438 590007015092-0.048-0.5824No
168TRPS187010015096-0.049-0.5817No
169PDE4D2470528 666001415170-0.052-0.5848No
170BRWD13130048 3140168 640060115171-0.052-0.5838No
171CITED25670114 513008815257-0.057-0.5875No
172UBE2L31690707 590024215283-0.058-0.5878No
173NCAM1314002615291-0.059-0.5872No
174PRPF39109008815307-0.060-0.5869No
175ANKRD10124002515362-0.064-0.5888No
176STK17B13009115425-0.067-0.5910No
177IGF11990193 3130377 329028015490-0.071-0.5932No
178XPO5285028615539-0.074-0.5945No
179PHF156550066 686067315583-0.078-0.5955No
180HNRPM450497 454045115631-0.081-0.5966No
181SORCS160411 589037315682-0.086-0.5978No
182MLLT101410288 329014215695-0.087-0.5970No
183RAI14770288 166007515743-0.091-0.5979No
184PCNP61076815750-0.092-0.5967No
185MAPKAP11660161 245057515922-0.107-0.6041No
186TOX344005316274-0.149-0.6206No
187MBNL2345070716344-0.161-0.6215No
188MECP2194045016365-0.163-0.6198No
189PUM1613050016453-0.179-0.6214No
190SFRS53450176 635000816484-0.186-0.6197No
191TPST1257035816753-0.242-0.6301Yes
192VGLL4686046316801-0.254-0.6282Yes
193PHF2406030016806-0.255-0.6240Yes
194SIRT1119073116815-0.257-0.6199Yes
195DHX32268013816860-0.267-0.6176Yes
196PURB536013816916-0.280-0.6157Yes
197ADIPOR1314044016952-0.289-0.6126Yes
198FNTA7005917007-0.303-0.6102Yes
199MOCS2294049717012-0.304-0.6051Yes
200PRDM2780278 194069217294-0.381-0.6137Yes
201NXF1157037717319-0.391-0.6082Yes
202ZFX590040017341-0.399-0.6023Yes
203CBX31780592 394000817359-0.405-0.5962Yes
204SULF246008617380-0.414-0.5900Yes
205SCN5A407001717398-0.420-0.5836Yes
206MTA1383009217432-0.430-0.5779Yes
207PDCD43360403 569011017447-0.436-0.5710Yes
208CUGBP26180121 684013917550-0.471-0.5683Yes
209MAP3K7IP2234024217639-0.508-0.5642Yes
210BZW146027017721-0.545-0.5590Yes
211CCT8622001917753-0.557-0.5510Yes
212NEDD91740373 423005317787-0.570-0.5428Yes
213CMTM4360600 352033217834-0.595-0.5349Yes
214SESTD11090333 378059317835-0.595-0.5245Yes
215ARL8B371036817848-0.602-0.5146Yes
216LRP11198032417913-0.631-0.5070Yes
217LRRC8D178001417935-0.642-0.4969Yes
218SMOC2117017017969-0.661-0.4871Yes
219TRAM12340441 662059217982-0.667-0.4761Yes
220ACACA2490612 268036918033-0.701-0.4666Yes
221ELAVL1473049718059-0.717-0.4554Yes
222RNF44591069218104-0.755-0.4446Yes
223TMPO405049418166-0.804-0.4338Yes
224PPP2CA399011318202-0.833-0.4211Yes
225NFYB185005318226-0.854-0.4074Yes
226NDEL1237046518246-0.881-0.3930Yes
227LUC7L6040156 611041118256-0.892-0.3779Yes
228H3F3A290008618341-0.991-0.3651Yes
229PPM1D169019318346-1.000-0.3479Yes
230ELF1478045018367-1.032-0.3309Yes
231UBE3C314067318377-1.048-0.3130Yes
232STK4264015218411-1.123-0.2952Yes
233SFRS66022418439-1.185-0.2759Yes
234CTCF534001718455-1.243-0.2549Yes
235ATP2A21090075 399027918482-1.356-0.2326Yes
236H3F3B141030018492-1.379-0.2090Yes
237SFRS1236044018511-1.447-0.1846Yes
238EIF4G23800575 686018418522-1.497-0.1590Yes
239ATF4730441 174019518536-1.582-0.1320Yes
240UHRF11410273 166024218538-1.595-0.1041Yes
241SMOC184003918549-1.657-0.0756Yes
242HNRPDL1050102 1090181 536047118572-2.002-0.0418Yes
243CUTL11570113 1770091 1850273 2100286 534060518597-2.5190.0010Yes
Table: GSEA details [plain text format]



Fig 2: TTTGTAG,MIR-520D   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: TTTGTAG,MIR-520D: Random ES distribution   
Gene set null distribution of ES for TTTGTAG,MIR-520D