Details for gene set CAGTGTT,MIR-141,MIR-200A[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	CAGTGTT,MIR-141,MIR-200A
Enrichment Score (ES)	-0.612987
Normalized Enrichment Score (NES)	-1.6642733
Nominal p-value	0.0
FDR q-value	0.012380172
FWER p-Value	0.119

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSEN1	130403 2030647 6100603	35	2.626	0.0505	No
2	ACOT7	730735 1400176 7050053	79	1.939	0.0868	No
3	HRBL	1850102 3830253 4780176	257	1.075	0.0986	No
4	STAT5A	2680458	831	0.525	0.0779	No
5	RTN4RL1	2630368	928	0.486	0.0824	No
6	BACE1	2650438	1252	0.386	0.0725	No
7	ATF5	5670685	1332	0.368	0.0755	No
8	PPT2	2340059 3450148	1772	0.280	0.0572	No
9	ST3GAL3	2810601	2161	0.222	0.0406	No
10	EPN1	4060725	2163	0.221	0.0449	No
11	DOLPP1	4780619 6400053	2317	0.198	0.0406	No
12	SON	3120148 5860239 7040403	2364	0.192	0.0419	No
13	SLC25A3	670112	2378	0.190	0.0449	No
14	SERF2	5720010	2464	0.179	0.0439	No
15	DEK	1050451 4560037	2802	0.134	0.0282	No
16	AMPD2	630093 1170070	2830	0.131	0.0294	No
17	SLC6A9	2470520	2887	0.126	0.0288	No
18	TOP1	770471 4060632 6650324	2912	0.123	0.0300	No
19	MDM1	510528 1780280 2680152 2690181 3060025 3120487 4210601 4540037 4610142 5290110 6400433 6480743	2935	0.120	0.0312	No
20	PPP2R2A	2900014 5700575	2973	0.116	0.0315	No
21	CDC42BPB	6350037	3056	0.109	0.0292	No
22	HMG20A	4590113	3141	0.101	0.0266	No
23	DLC1	1090632 6450594	3530	0.076	0.0071	No
24	HIC2	4010433	3558	0.075	0.0071	No
25	LRRC8A	2510193	3679	0.069	0.0019	No
26	TSC1	1850672	3686	0.068	0.0030	No
27	MOBKL2B	940128	3753	0.065	0.0007	No
28	SPRYD3	50403	3764	0.065	0.0014	No
29	PEX5	1240746 1570092 2510487	3765	0.065	0.0027	No
30	SIPA1L2	4850731	3783	0.064	0.0030	No
31	EPHA2	5890056	3888	0.060	-0.0014	No
32	PAPPA	4230463	4079	0.054	-0.0107	No
33	SEMA6A	2690138 3060021	4083	0.053	-0.0098	No
34	SYT4	5080193	4110	0.053	-0.0102	No
35	KIF1C	2480484	4175	0.051	-0.0126	No
36	ZCCHC3	580438 1990035 4780278	4372	0.045	-0.0224	No
37	TM9SF4	450538 1050093 4210112	4700	0.037	-0.0394	No
38	TTYH2	1450397 3870100 6550347	4717	0.037	-0.0395	No
39	PTPRG	2650524 1340022	4811	0.035	-0.0439	No
40	STAT5B	6200026	5048	0.031	-0.0561	No
41	PLAG1	1450142 3870139 6520039	5161	0.029	-0.0616	No
42	SOX5	2370576 2900167 3190128 5050528	5174	0.029	-0.0617	No
43	MDGA1	1170139	5330	0.026	-0.0696	No
44	CYP26B1	2630142	5349	0.026	-0.0701	No
45	ELF2	1690014 2480132 3060180 3190504	5369	0.026	-0.0706	No
46	EPHA7	1190288 4010278	5441	0.025	-0.0740	No
47	ELAVL2	360181	5547	0.024	-0.0792	No
48	FRMD4A	2190176	5807	0.021	-0.0929	No
49	RAB38	2970735	5933	0.020	-0.0993	No
50	USP9X	130435 2370735 3120338	5977	0.019	-0.1012	No
51	CXCL12	580546 4150750 4570068	5997	0.019	-0.1019	No
52	SLC17A6	4210576	6067	0.018	-0.1053	No
53	CPD	5360403 5860685	6182	0.017	-0.1111	No
54	HOXB5	2900538	6224	0.017	-0.1130	No
55	ATXN1	5550156	6310	0.016	-0.1173	No
56	LHX6	2360731 3360397	6512	0.015	-0.1279	No
57	MYT1L	5670369 6660403	6802	0.013	-0.1434	No
58	KLHL18	4560075	6809	0.013	-0.1435	No
59	BRUNOL6	6840373	6935	0.012	-0.1500	No
60	PHLPP	3440563	7008	0.012	-0.1537	No
61	NRP2	4070400 5860041 6650446	7033	0.012	-0.1548	No
62	STK35	2360121	7110	0.011	-0.1587	No
63	PHYHIPL	2360706 3840692	7241	0.011	-0.1656	No
64	POU4F1	2260315	7302	0.010	-0.1686	No
65	STAT4	1660373 3130019	7406	0.010	-0.1740	No
66	PITX2	870537 2690139	7494	0.009	-0.1786	No
67	TMEFF1	2680100	7542	0.009	-0.1809	No
68	HOXC13	4070722	8081	0.007	-0.2101	No
69	DIXDC1	6980435	8253	0.007	-0.2192	No
70	KHDRBS2	3520717	8382	0.006	-0.2261	No
71	ACVR2A	6110647	8395	0.006	-0.2266	No
72	TIAL1	4150048 6510605	8678	0.005	-0.2418	No
73	LPP	1660541	8740	0.005	-0.2450	No
74	NFASC	1940619 2470156 4590168 6840524	8751	0.005	-0.2455	No
75	WDFY3	3610041 4560333 4570273	8760	0.005	-0.2458	No
76	FOXA1	3710609	8803	0.005	-0.2480	No
77	HLF	2370113	8885	0.005	-0.2523	No
78	PAFAH1B2	5360546 6860672	9200	0.004	-0.2693	No
79	CSF3	2230193 6660707	9346	0.003	-0.2771	No
80	ITSN1	2640577	9380	0.003	-0.2788	No
81	MTSS1	780435 2370114	9421	0.003	-0.2810	No
82	RARB	430139 1410138	9600	0.003	-0.2906	No
83	THRB	1780673	9623	0.003	-0.2917	No
84	CHES1	4570121 5700162	9627	0.003	-0.2918	No
85	LYPLA1	4480373 5570551	9804	0.002	-0.3014	No
86	TRHDE	1690068	9807	0.002	-0.3014	No
87	GPM6B	6220458	9951	0.002	-0.3092	No
88	PCDH8	2360047 4200452	10061	0.002	-0.3151	No
89	SPG3A	2760091 3120170	10230	0.001	-0.3242	No
90	HOXA11	6980133	10256	0.001	-0.3255	No
91	DDX5	940021 2630338 3440148	10260	0.001	-0.3257	No
92	B3GNT1	2350446	10267	0.001	-0.3260	No
93	MMP16	2680139	10269	0.001	-0.3260	No
94	SP4	3850176	10522	0.000	-0.3397	No
95	TTR	4150072	10531	0.000	-0.3401	No
96	ZFR	5910647	10559	0.000	-0.3416	No
97	LENG8	3130731	10637	0.000	-0.3458	No
98	PCTK2	5700673	10823	-0.000	-0.3558	No
99	NRXN1	460408 5340270 6370066	10842	-0.000	-0.3568	No
100	SRC	580132	10877	-0.001	-0.3586	No
101	EXOC5	7000711	11005	-0.001	-0.3655	No
102	CALCR	1690494	11412	-0.002	-0.3875	No
103	SNF1LK	6110403	11550	-0.002	-0.3950	No
104	CLASP2	2510139	11663	-0.003	-0.4010	No
105	HNRPF	670138	11871	-0.003	-0.4122	No
106	SLC16A7	2320672	12140	-0.004	-0.4267	No
107	DR1	5860750	12283	-0.005	-0.4343	No
108	ARPC5	1740411 3450300	12353	-0.005	-0.4380	No
109	TGFB2	4920292	12411	-0.005	-0.4410	No
110	NR2C2	6100097	12442	-0.005	-0.4425	No
111	OLFM1	3360161 5570066	12529	-0.006	-0.4470	No
112	CSNK2A1	1580577	12794	-0.007	-0.4613	No
113	SEPT7	2760685	12907	-0.007	-0.4672	No
114	RBM7	5890348	12911	-0.007	-0.4672	No
115	ESRRG	4010181	12954	-0.007	-0.4694	No
116	ATXN7	1450435	13254	-0.009	-0.4854	No
117	RAD23B	2190671	13365	-0.010	-0.4912	No
118	MYRIP	1580471	13393	-0.010	-0.4925	No
119	QKI	5220093 6130044	13435	-0.010	-0.4945	No
120	KCNJ2	630019	13584	-0.011	-0.5023	No
121	JUN	840170	13604	-0.011	-0.5031	No
122	WDR26	1090138	13648	-0.012	-0.5052	No
123	UBE3A	1240152 2690438 5860609	13717	-0.013	-0.5087	No
124	PBEF1	1090278	13761	-0.013	-0.5108	No
125	GRIN3A	2370592	13778	-0.013	-0.5114	No
126	DRD2	5890369	13866	-0.014	-0.5158	No
127	STXBP1	360072 6220717	13909	-0.015	-0.5178	No
128	STRN	5570706 7050333	14055	-0.017	-0.5254	No
129	DUSP3	1240129 6840215	14068	-0.017	-0.5257	No
130	CSNK1A1	2340427	14088	-0.017	-0.5264	No
131	DMWD	770019 1690047	14170	-0.018	-0.5304	No
132	PCDH9	2100136	14192	-0.019	-0.5312	No
133	APBB2	5130403	14215	-0.019	-0.5320	No
134	PTP4A1	130692	14223	-0.019	-0.5320	No
135	SNAP91	3170056 5690520	14326	-0.021	-0.5371	No
136	SPAG9	580497 2510180 4210685	14429	-0.023	-0.5422	No
137	SLC1A1	520372 6420059	14694	-0.031	-0.5559	No
138	GATA6	1770010	14779	-0.034	-0.5598	No
139	RPH3AL	70110	14812	-0.035	-0.5608	No
140	FGFR2	4670601 5570402 6940377	14922	-0.040	-0.5660	No
141	WDR44	130195 1050609 1570685	14950	-0.041	-0.5666	No
142	SOX11	610279	14979	-0.043	-0.5673	No
143	BICD2	1090411	15111	-0.049	-0.5734	No
144	BAP1	3830131	15172	-0.052	-0.5756	No
145	E2F3	50162 460180	15177	-0.052	-0.5748	No
146	CNR1	6550494 6760497	15249	-0.056	-0.5776	No
147	MARCH7	3800020 6620168	15268	-0.057	-0.5774	No
148	CHD9	430037 2570129 5420398	15355	-0.063	-0.5808	No
149	FBXL2	6450722	15510	-0.073	-0.5877	No
150	YTHDF3	4540632 4670717 7040609	15571	-0.077	-0.5895	No
151	TNS3	6380242	15582	-0.078	-0.5885	No
152	THRAP2	4920600	15592	-0.079	-0.5874	No
153	TCERG1	2350551 4540397 5220746	15762	-0.092	-0.5947	No
154	PTGES3	2190440 2680524	15919	-0.107	-0.6011	No
155	MYH10	2640673	15934	-0.108	-0.5997	No
156	CALU	2680403 3520056 4610348 5720176 6130121	16005	-0.117	-0.6011	No
157	HIPK1	110193	16015	-0.118	-0.5993	No
158	SLC39A9	3940348	16034	-0.120	-0.5979	No
159	KPNA3	7040088	16100	-0.126	-0.5989	No
160	CDC14A	4050132	16158	-0.133	-0.5993	No
161	TAF12	3710746 4920300 6180603	16258	-0.147	-0.6018	No
162	MECP2	1940450	16365	-0.163	-0.6043	No
163	ATP6V1B2	4060528	16526	-0.193	-0.6091	Yes
164	FKBP5	2190048	16537	-0.195	-0.6058	Yes
165	DNAJC13	4730091	16570	-0.200	-0.6035	Yes
166	PLAGL2	1770148	16594	-0.206	-0.6007	Yes
167	YWHAG	3780341	16606	-0.207	-0.5972	Yes
168	ARNTL	3170463	16623	-0.211	-0.5938	Yes
169	ARHGEF18	2120279	16633	-0.214	-0.5901	Yes
170	ANKFY1	360309 5390021	16681	-0.225	-0.5881	Yes
171	MIB1	3800537	16713	-0.232	-0.5852	Yes
172	FUS	4760619	16757	-0.242	-0.5827	Yes
173	CSNK1G3	110450	16790	-0.251	-0.5794	Yes
174	RTF1	2100735	16811	-0.256	-0.5754	Yes
175	SIRT1	1190731	16815	-0.257	-0.5705	Yes
176	HOXB4	540131	16867	-0.269	-0.5679	Yes
177	SLC23A2	6660722	16904	-0.276	-0.5643	Yes
178	CBL	6380068	16908	-0.276	-0.5590	Yes
179	GPC2	130647	16958	-0.290	-0.5559	Yes
180	BHLHB2	7040603	16960	-0.290	-0.5501	Yes
181	GRB2	6650398	16989	-0.299	-0.5457	Yes
182	AK3L1	7100601	16999	-0.300	-0.5402	Yes
183	YAF2	940053	17126	-0.338	-0.5403	Yes
184	YTHDF2	4060332 4610279	17165	-0.348	-0.5355	Yes
185	OGT	2360131 4610333	17176	-0.350	-0.5290	Yes
186	OLIG3	1050603	17204	-0.356	-0.5234	Yes
187	CDC25A	3800184	17296	-0.382	-0.5207	Yes
188	KIF3A	5050348 6650079	17303	-0.385	-0.5134	Yes
189	ATP6V1A	6590242	17388	-0.416	-0.5097	Yes
190	SLC20A1	6420014	17395	-0.418	-0.5017	Yes
191	CCNE2	3120537	17413	-0.423	-0.4942	Yes
192	PDCD4	3360403 5690110	17447	-0.436	-0.4873	Yes
193	OSBPL11	1770044	17574	-0.486	-0.4844	Yes
194	TFRC	4050551	17586	-0.491	-0.4752	Yes
195	H2AFZ	1470168	17670	-0.522	-0.4693	Yes
196	MTPN	3940167	17784	-0.569	-0.4641	Yes
197	RBMS1	6400014	17915	-0.633	-0.4586	Yes
198	RUNX1	3840711	17919	-0.634	-0.4461	Yes
199	MAP2K4	5130133	17937	-0.644	-0.4342	Yes
200	TRAM1	2340441 6620592	17982	-0.667	-0.4233	Yes
201	CNP	2260451	18000	-0.681	-0.4106	Yes
202	ACACA	2490612 2680369	18033	-0.701	-0.3984	Yes
203	SIM2	2100044	18068	-0.726	-0.3858	Yes
204	ATP1B1	3130594	18082	-0.740	-0.3718	Yes
205	CDV3	1940577	18094	-0.746	-0.3575	Yes
206	RNF44	5910692	18104	-0.755	-0.3429	Yes
207	CUL3	1850520	18128	-0.768	-0.3289	Yes
208	PPP1R15B	2640280 5860082	18137	-0.777	-0.3138	Yes
209	SUPT6H	3170082	18163	-0.801	-0.2992	Yes
210	PITPNB	5130039	18165	-0.802	-0.2833	Yes
211	FOXP1	6510433	18175	-0.810	-0.2676	Yes
212	PPP2CA	3990113	18202	-0.833	-0.2524	Yes
213	CD47	1850603	18213	-0.844	-0.2361	Yes
214	SFPQ	4760110	18222	-0.850	-0.2196	Yes
215	BRD3	6130672	18237	-0.871	-0.2030	Yes
216	RABGAP1	5050397	18248	-0.884	-0.1860	Yes
217	RAP2C	1690132	18260	-0.898	-0.1687	Yes
218	MBNL1	2640762 7100048	18303	-0.941	-0.1522	Yes
219	APRIN	2810050	18339	-0.987	-0.1344	Yes
220	TULP4	2320364	18381	-1.050	-0.1157	Yes
221	WSB1	870563	18395	-1.079	-0.0949	Yes
222	ANP32E	6510706	18458	-1.249	-0.0734	Yes
223	ATP2A2	1090075 3990279	18482	-1.356	-0.0476	Yes
224	PRKACB	4210170	18485	-1.364	-0.0205	Yes
225	TCF12	3610324 7000156	18494	-1.384	0.0066	Yes