DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#truncNotch_versus_absentNotch
Phenotypephenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in classabsentNotch
GeneSetATACTGT,MIR-144
Enrichment Score (ES)-0.6832633
Normalized Enrichment Score (NES)-1.7931275
Nominal p-value0.0
FDR q-value5.5884995E-4
FWER p-Value0.0010
Table: GSEA Results Summary



Fig 1: Enrichment plot: ATACTGT,MIR-144   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ARID2110647 53904351081.6500.0454No
2AGRN67701526450.6240.0357No
3ATP5G284006812060.3990.0178No
4MYST3527050019910.244-0.0171No
5SON3120148 5860239 704040323640.192-0.0313No
6HDHD22850411 694016829660.117-0.0602No
7PDE7B570005631200.102-0.0653No
8CCT2169011331490.100-0.0637No
9PTPN9329040832380.094-0.0656No
10CBX15080408 198023932960.089-0.0659No
11DLG545021533810.084-0.0678No
12CRSP2194005934240.082-0.0675No
13NIN3450576 508004835470.075-0.0718No
14CPEB2476033838150.063-0.0843No
15PAPPA423046340790.054-0.0969No
16SEMA6A2690138 306002140830.053-0.0954No
17ALS23130546 640007041490.051-0.0973No
18HOXA106110397 710045841580.051-0.0961No
19NARG15910563 635009542190.050-0.0979No
20EDAR622067042700.048-0.0991No
21PTGFRN412052442920.048-0.0987No
22PTHLH529073943490.046-0.1003No
23CDH2520435 2450451 2760025 665047744880.042-0.1065No
24ETS15270278 6450717 662046545030.042-0.1059No
25BACH2676013149240.033-0.1277No
26PAFAH1B14230333 6420121 645006650170.032-0.1317No
27PLAG11450142 3870139 652003951610.029-0.1385No
28PIM163004751870.028-0.1390No
29SORCS3570030954420.025-0.1520No
30ELL2642009154730.025-0.1528No
31ST6GALNAC3407056355140.024-0.1542No
32CLK11780551 2100102 2340347 248034756040.023-0.1583No
33ARID5B11040356700.022-0.1612No
34CXCL12580546 4150750 457006859970.019-0.1782No
35ST18572053760850.018-0.1824No
36SMPD352016462930.016-0.1931No
37ATXN1555015663100.016-0.1935No
38GLCCI1110091 2640082 2900692 3290070 637001464350.015-0.1997No
39TTN2320161 4670056 655002665320.015-0.2045No
40TBX13710133 659012168070.013-0.2189No
41LIFR3360068 383010269290.012-0.2251No
42NRP24070400 5860041 665044670330.012-0.2303No
43CPEB3394016473860.010-0.2491No
44RFX43710100 534021574010.010-0.2495No
45TRIB1232043576660.009-0.2635No
46CDH111230133 2100180 461011077920.008-0.2701No
47SEMA6D4050324 5860138 635030779540.008-0.2785No
48MSX1265030980130.008-0.2815No
49DMD1740041 399033282450.007-0.2938No
50FMR1505007586090.006-0.3132No
51WDFY33610041 4560333 457027387600.005-0.3212No
52FOXO1A312067088860.005-0.3278No
53SS181940440 2900072 690012989970.004-0.3337No
54ANK2651054691180.004-0.3400No
55PURA387015694260.003-0.3566No
56RARB430139 141013896000.003-0.3659No
57PAX35055196490.003-0.3684No
58PNRC136002596600.003-0.3688No
59MYT1677052497590.002-0.3741No
60FBXW11645063297830.002-0.3753No
61ATP2B2378039798060.002-0.3764No
62ALDH1A3210027098430.002-0.3783No
63FAM60A394009298670.002-0.3794No
64SFRP16980315100210.002-0.3877No
65CBX470332100590.002-0.3896No
66SP43850176105220.000-0.4147No
67NR2F23170609 3310577106150.000-0.4196No
68GDF104850082106270.000-0.4202No
69CALCRL4280035106500.000-0.4214No
70STAG11190300 1400722 4590100106540.000-0.4216No
71PPARA206002610753-0.000-0.4269No
72MEIS1140057511234-0.001-0.4528No
73PALM24120068 710039811263-0.002-0.4543No
74RGS1678009111346-0.002-0.4587No
75ZIC4150008211364-0.002-0.4596No
76HNRPF67013811871-0.003-0.4869No
77CAPZA1314039011954-0.004-0.4912No
78PCDH1843001012045-0.004-0.4959No
79WTAP401017612056-0.004-0.4964No
80SLITRK4591002212100-0.004-0.4986No
81CCNK698004812215-0.004-0.5046No
82FOSB194014212245-0.004-0.5060No
83JPH161073912523-0.006-0.5209No
84RHOBTB1141001012809-0.007-0.5361No
85LGR4166030912841-0.007-0.5376No
86FMN245046312944-0.007-0.5429No
87ESRRG401018112954-0.007-0.5431No
88CAV25130286 513056313310-0.009-0.5621No
89MYO1E314050413391-0.010-0.5661No
90SMARCA1423031513422-0.010-0.5674No
91QKI5220093 613004413435-0.010-0.5677No
92AHCY423060513455-0.010-0.5684No
93ARRDC3461039013592-0.011-0.5754No
94ZCCHC246059213720-0.013-0.5819No
95PTP4A113069214223-0.019-0.6085No
96SNAP913170056 569052014326-0.021-0.6134No
97ACSL4510020 1240041 3190050 4540500 557046314417-0.023-0.6175No
98PANK1670091 622060514616-0.029-0.6274No
99UBE4A610052014649-0.030-0.6282No
100PFKFB23940538 710005914652-0.030-0.6274No
101RIN2245018414801-0.035-0.6343No
102GCNT26400162 2370609 2760309 4540465 610028014813-0.035-0.6338No
103LHX2361046314847-0.037-0.6344No
104FNDC3A2690097 329004414890-0.038-0.6355No
105WIF1710018415108-0.049-0.6458No
106PDE4D2470528 666001415170-0.052-0.6474No
107VKORC1L1110220 140005015191-0.053-0.6469No
108FBXL3591014215233-0.056-0.6474No
109FUSIP1520082 539011415336-0.061-0.6510No
110NFE2L22810619 339016215388-0.065-0.6517No
111NEDD4460736 119028015403-0.066-0.6505No
112ARFGEF1676049415432-0.068-0.6499No
113DGCR2780041 401073115449-0.069-0.6486No
114SLC12A24610019 604067215470-0.070-0.6475No
115RNF1112970072 3140112 513064715499-0.072-0.6468No
116STARD8178004715549-0.075-0.6471No
117SUCLA2730632 117029215552-0.075-0.6449No
118HSF2140046515608-0.080-0.6454No
119FBXO32110037 61075015862-0.101-0.6560No
120RBM124570239 6040411 666012916029-0.120-0.6612No
121NR3C163056316044-0.121-0.6582No
122ITSN278048416419-0.173-0.6731Yes
123PUM1613050016453-0.179-0.6693Yes
124HNRPU652073616509-0.190-0.6664Yes
125BRPF1317013916690-0.228-0.6691Yes
126SLC23A2666072216904-0.276-0.6720Yes
127UBE2D3319045216917-0.280-0.6640Yes
128CD281400739 421009317274-0.375-0.6716Yes
129IDH2268039717295-0.381-0.6609Yes
130GATA3613006817334-0.396-0.6506Yes
131ZFX590040017341-0.399-0.6386Yes
132CCNE2312053717413-0.423-0.6293Yes
133KPNA1527032417494-0.453-0.6195Yes
134PHTF2659005317509-0.458-0.6061Yes
135NGFRAP1677019517512-0.459-0.5919Yes
136SLC7A11285013817542-0.470-0.5789Yes
137CUGBP26180121 684013917550-0.471-0.5646Yes
138TFRC405055117586-0.491-0.5513Yes
139PKNOX1421045217645-0.511-0.5386Yes
140PPP1R16B352030017720-0.545-0.5256Yes
141MTPN394016717784-0.569-0.5114Yes
142PABPN146051917858-0.606-0.4965Yes
143UBE2D24590671 651044617960-0.656-0.4816Yes
144SIN3A219012118047-0.708-0.4643Yes
145MARCKS704045018178-0.816-0.4460Yes
146MAPK6676052018240-0.875-0.4221Yes
147ACBD3276017018294-0.929-0.3961Yes
148HAT1371008218342-0.992-0.3679Yes
149APPBP2513021518376-1.048-0.3371Yes
150GSPT1542005018464-1.279-0.3021Yes
151PPP3R11190041 157048718466-1.284-0.2623Yes
152EIF5638075018467-1.296-0.2220Yes
153EIF4G23800575 686018418522-1.497-0.1785Yes
154ARID1A2630022 1690551 481011018616-5.910-0.0000Yes
Table: GSEA details [plain text format]



Fig 2: ATACTGT,MIR-144   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ATACTGT,MIR-144: Random ES distribution   
Gene set null distribution of ES for ATACTGT,MIR-144