Details for gene set V$ZIC1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	wtNotch
GeneSet	V$ZIC1_01
Enrichment Score (ES)	-0.4752585
Normalized Enrichment Score (NES)	-1.225392
Nominal p-value	0.09255079
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FCGR3A	3840184	203	0.903	0.0205	No
2	FASTK	2690053 4280288 4610551 6370292	232	0.847	0.0485	No
3	PRDX5	1660592 2030091	267	0.771	0.0735	No
4	BTG1	4200735 6040131 6200133	327	0.674	0.0938	No
5	WNT8B	4560301	336	0.663	0.1165	No
6	S100A4	3780113	476	0.510	0.1267	No
7	FANCD2	1850280 6840348	518	0.486	0.1414	No
8	SLIT3	7100132	701	0.379	0.1448	No
9	FMNL2	4060438	770	0.354	0.1535	No
10	NLGN2	5900592	925	0.305	0.1557	No
11	LMNA	520471 1500075 3190167 4210020	951	0.295	0.1647	No
12	UTX	2900017 6770452	1008	0.281	0.1714	No
13	PMP22	4010239 6550072	1203	0.240	0.1693	No
14	BCL6	940100	1204	0.240	0.1776	No
15	KCNH2	1170451	1214	0.239	0.1855	No
16	EFNA4	4280309 6550576	1221	0.237	0.1934	No
17	USP21	3060446	1325	0.219	0.1955	No
18	PHF12	870400 3130687	1663	0.162	0.1828	No
19	RORA	380164 5220215	1743	0.153	0.1839	No
20	NFYA	5860368	1840	0.142	0.1836	No
21	SLC4A1	6290577	1905	0.136	0.1849	No
22	ETV6	610524	2027	0.123	0.1826	No
23	TPM2	520735 3870390	2100	0.117	0.1828	No
24	CDK6	4920253	2151	0.113	0.1840	No
25	DUSP11	1500088 4610280	2177	0.111	0.1866	No
26	LRP1	6270386	2362	0.097	0.1800	No
27	DCTN1	1450056 6590022	2455	0.091	0.1782	No
28	RBM12	4570239 6040411 6660129	2490	0.089	0.1794	No
29	TUFM	3290685	2626	0.080	0.1749	No
30	MBNL1	2640762 7100048	2676	0.077	0.1749	No
31	RRM1	4150433	2692	0.076	0.1767	No
32	OVOL1	1690131	2704	0.075	0.1787	No
33	TNRC15	6760746	2785	0.071	0.1769	No
34	PTK7	380315	2787	0.071	0.1793	No
35	SH3BP1	3450075 6350288	2825	0.069	0.1797	No
36	P2RX1	2940021 3290338	3133	0.055	0.1649	No
37	LMAN2L	50079 6590100 6650338	3136	0.055	0.1668	No
38	COL7A1	1230168 2190072	3204	0.052	0.1649	No
39	DNAJB5	2900215	3515	0.042	0.1496	No
40	MAP1A	4920576	3622	0.039	0.1452	No
41	PCTK3	1500328	3662	0.038	0.1444	No
42	PDGFB	3060440 6370008	3667	0.038	0.1455	No
43	LAMC2	450692 2680041 4200059 4670148	3696	0.037	0.1452	No
44	NRG1	1050332	3813	0.035	0.1402	No
45	DHX30	2480494	4077	0.029	0.1269	No
46	SCGB3A1	5900333 6400592	4184	0.028	0.1221	No
47	THRAP3	6180309	4395	0.024	0.1116	No
48	KLF12	1660095 4810288 5340546 6520286	4618	0.022	0.1003	No
49	GJB1	1240441	4621	0.022	0.1010	No
50	KLF13	4670563	4876	0.019	0.0878	No
51	SEMA3B	5570563	4912	0.018	0.0866	No
52	EYA4	5360286	5062	0.017	0.0791	No
53	NLGN3	2650463	5089	0.017	0.0783	No
54	KCND1	6860278	5140	0.017	0.0762	No
55	ATP6V0A4	360100	5177	0.016	0.0748	No
56	RHO	4280398	5182	0.016	0.0751	No
57	GNAO1	2510292 6590487	5227	0.016	0.0733	No
58	ERBB4	4610400 4810017	5389	0.015	0.0651	No
59	BCOR	1660452 3940053	5685	0.013	0.0495	No
60	SPRY4	1570594	5763	0.012	0.0458	No
61	DRD1	430025	6076	0.011	0.0292	No
62	HOXB9	2640687	6214	0.010	0.0222	No
63	PTCH2	2900092	6274	0.010	0.0193	No
64	PLXDC2	6400358	6307	0.010	0.0179	No
65	GABRG2	2350402 4210204 6130279 6550037	6773	0.008	-0.0070	No
66	UNC5C	2640056	6844	0.007	-0.0106	No
67	PGF	4810593	6896	0.007	-0.0131	No
68	CYP26B1	2630142	7027	0.007	-0.0199	No
69	HPCA	6860010	7124	0.006	-0.0249	No
70	FADS3	3120079	7227	0.006	-0.0302	No
71	PICALM	1940280	7377	0.005	-0.0381	No
72	CACNG3	520093	7494	0.005	-0.0442	No
73	NKX2-2	4150731	7530	0.005	-0.0459	No
74	ERBB3	5890372	7825	0.004	-0.0617	No
75	PACSIN1	3870632 6370021 6900707	7984	0.004	-0.0702	No
76	GHR	2260156	8244	0.003	-0.0841	No
77	NTN1	5700600	8334	0.003	-0.0889	No
78	TLK2	1170161	8891	0.001	-0.1190	No
79	NXPH3	5860292	9153	0.001	-0.1331	No
80	AP1S2	780279 4280707	9162	0.001	-0.1335	No
81	CPEB3	3940164	9319	0.000	-0.1420	No
82	SPG3A	2760091 3120170	9328	0.000	-0.1424	No
83	FGF10	730458 840706	9415	-0.000	-0.1471	No
84	NOL4	5050446 5360519	9745	-0.001	-0.1649	No
85	LGI1	1850020	9897	-0.001	-0.1730	No
86	TYRP1	3170450 5690204 6290092	9997	-0.002	-0.1783	No
87	ZMYND11	630181 2570019 4850138 5360040	10007	-0.002	-0.1788	No
88	EIF4G1	4070446	10028	-0.002	-0.1798	No
89	RALY	940427 1740066	10251	-0.002	-0.1917	No
90	NELL2	2340725 4280301 5420008	10331	-0.003	-0.1959	No
91	DLL4	6400403	10357	-0.003	-0.1972	No
92	SLC38A3	5340142	10429	-0.003	-0.2010	No
93	KCNJ14	870441 4060113 6110372	10573	-0.003	-0.2086	No
94	PCDHGA2	1780541	10574	-0.003	-0.2085	No
95	HNRPD	4120021	10659	-0.003	-0.2129	No
96	HOXB8	3710450	10677	-0.004	-0.2137	No
97	CXXC5	840010	10845	-0.004	-0.2226	No
98	NKX2-8	50022	10946	-0.004	-0.2279	No
99	IL11	1740398	11170	-0.005	-0.2398	No
100	GATA6	1770010	11558	-0.006	-0.2606	No
101	DQX1	4150408	11848	-0.007	-0.2760	No
102	HOXA10	6110397 7100458	12089	-0.008	-0.2887	No
103	PLA2G3	5130739	12100	-0.008	-0.2890	No
104	HOXA7	5910152	12252	-0.009	-0.2968	No
105	CYP26A1	380022 2690600	12274	-0.009	-0.2977	No
106	CASKIN2	2030113	12279	-0.009	-0.2975	No
107	MTUS1	780348 4920609	12437	-0.010	-0.3057	No
108	KCNA1	2030594	12467	-0.010	-0.3069	No
109	METTL4	1050722 7050296	12541	-0.011	-0.3105	No
110	CPNE1	3440131	12619	-0.011	-0.3143	No
111	AEBP2	2970603	12661	-0.011	-0.3161	No
112	PTPN1	2650056	12809	-0.012	-0.3237	No
113	DVL2	6110162	12968	-0.013	-0.3318	No
114	GRIN2D	6620372	13030	-0.014	-0.3346	No
115	DCTN3	6840131	13072	-0.014	-0.3364	No
116	PHEX	540162	13134	-0.014	-0.3392	No
117	UBE2R2	1230504	13262	-0.015	-0.3456	No
118	NEGR1	1940731 5130170	13432	-0.016	-0.3542	No
119	FRAS1	5080170 5670347	13457	-0.017	-0.3549	No
120	ACSL4	510020 1240041 3190050 4540500 5570463	13891	-0.021	-0.3776	No
121	MYOC	1940270 2100333	13893	-0.021	-0.3769	No
122	UCHL3	1240735	14073	-0.023	-0.3858	No
123	POU2F1	70577 430373 4850324 5910056	14111	-0.024	-0.3870	No
124	LRP8	3610746 5360035	14223	-0.025	-0.3922	No
125	BMPR2	5340066 6960328	14260	-0.026	-0.3932	No
126	ZADH2	520438	14276	-0.026	-0.3931	No
127	CBLN1	5670358	14315	-0.026	-0.3943	No
128	FUT2	3990047	14576	-0.031	-0.4073	No
129	KCND2	1170128 2100112	14730	-0.034	-0.4144	No
130	SALL1	5420020 7050195	14926	-0.038	-0.4236	No
131	STAR	7040670	15013	-0.041	-0.4269	No
132	WDR13	3840520 4670064	15102	-0.043	-0.4302	No
133	RGS14	380086	15109	-0.043	-0.4290	No
134	ARHGEF17	2060008	15135	-0.044	-0.4288	No
135	TTC16	4830347	15172	-0.045	-0.4292	No
136	MRPS18B	5570086	15329	-0.050	-0.4359	No
137	HOXD9	2570181	15429	-0.054	-0.4394	No
138	ASB7	520242 2450088 3990563 4280538	15556	-0.059	-0.4442	No
139	EIF5A	1500059 5290022 6370026	15583	-0.060	-0.4435	No
140	ZNF318	5890091 6130021	15924	-0.075	-0.4593	No
141	SUPT16H	1240333	15987	-0.078	-0.4600	No
142	WNT10B	510050	16005	-0.079	-0.4581	No
143	YARS	70739	16063	-0.083	-0.4583	No
144	TAZ	7100193	16109	-0.086	-0.4578	No
145	TRERF1	6370017 6940138	16133	-0.087	-0.4560	No
146	IPO13	3870088	16219	-0.091	-0.4574	No
147	ABHD8	6660082	16250	-0.093	-0.4558	No
148	CDKN1B	3800025 6450044	16341	-0.100	-0.4572	No
149	LAT	3170025	16367	-0.102	-0.4550	No
150	FES	3120129 5550600	16388	-0.104	-0.4524	No
151	SIPA1	5220687	16402	-0.105	-0.4495	No
152	CUEDC1	1660463	16421	-0.106	-0.4468	No
153	PCBP4	6350722	16439	-0.108	-0.4439	No
154	MAEA	1170392	16646	-0.123	-0.4508	No
155	TGIF2	3840364 4050520	16656	-0.123	-0.4470	No
156	RAB11A	5360079	16709	-0.129	-0.4453	No
157	SLC4A2	2690114	16738	-0.131	-0.4423	No
158	DMTF1	5910047 1570497 2480100 6620239	17235	-0.189	-0.4626	No
159	YWHAG	3780341	17293	-0.202	-0.4586	No
160	KIF3C	2360162 2940110	17332	-0.209	-0.4534	No
161	CGGBP1	4810053	17430	-0.226	-0.4508	No
162	TRAF4	3060041 4920528 6980286	17882	-0.340	-0.4634	Yes
163	ZDHHC12	3450377	17934	-0.359	-0.4537	Yes
164	PAK4	1690152	18156	-0.461	-0.4496	Yes
165	MCRS1	110121 2340592 5270484	18175	-0.474	-0.4340	Yes
166	MAGED1	6650332	18191	-0.483	-0.4180	Yes
167	LEF1	2470082 7100288	18318	-0.604	-0.4038	Yes
168	FSTL3	5420279	18336	-0.626	-0.3829	Yes
169	PPP1R10	110136 3170725 3610484	18342	-0.635	-0.3610	Yes
170	PIK4CB	510450 1780452	18365	-0.664	-0.3391	Yes
171	EFEMP2	5550086	18401	-0.727	-0.3156	Yes
172	GEMIN4	130278 2230075	18405	-0.731	-0.2903	Yes
173	HCST	2350603	18450	-0.870	-0.2624	Yes
174	CEECAM1	780605	18494	-1.066	-0.2276	Yes
175	HSPB2	1990110	18539	-1.389	-0.1815	Yes
176	NOTCH1	3390114	18588	-2.330	-0.1029	Yes
177	CRYAB	4810619	18600	-2.995	0.0009	Yes