Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	0.5937556
Normalized Enrichment Score (NES)	1.480365
Nominal p-value	0.0034843206
FDR q-value	0.353288
FWER p-Value	0.994

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CSRP2BP	4570717 5550333	27	2.547	0.0644	Yes
2	BOK	1170373 5860446	40	2.181	0.1202	Yes
3	GNAS	630441 1850373 4050152	73	1.512	0.1576	Yes
4	SLC38A2	1470242 3800026	81	1.464	0.1951	Yes
5	DUSP1	6860121	96	1.398	0.2305	Yes
6	NIT1	1230338 3940671	101	1.374	0.2658	Yes
7	U2AF2	450600 4670128 5420292	127	1.321	0.2987	Yes
8	HMOX1	1740687	152	1.161	0.3274	Yes
9	UBE4B	780008 3610154	197	0.919	0.3488	Yes
10	ATIC	4010593 6380463	213	0.887	0.3709	Yes
11	ATF7IP	2690176 6770021	261	0.780	0.3886	Yes
12	MTCH2	3780603 6620215	316	0.684	0.4033	Yes
13	PER1	3290315	355	0.638	0.4178	Yes
14	OSGEP	5700239	396	0.591	0.4309	Yes
15	AKAP12	1450739	428	0.564	0.4438	Yes
16	APEX1	3190519	459	0.538	0.4561	Yes
17	HTF9C	3190048 4120132	462	0.536	0.4699	Yes
18	STX6	4850750 6770278	527	0.480	0.4788	Yes
19	PFDN2	4230156	538	0.473	0.4905	Yes
20	NUDC	4780025	586	0.436	0.4992	Yes
21	KBTBD2	2320014	594	0.432	0.5100	Yes
22	STMN1	1990717	620	0.416	0.5194	Yes
23	COMMD3	2510259	628	0.412	0.5297	Yes
24	ALDH6A1	1770746	655	0.400	0.5387	Yes
25	EIF4B	5390563 5270577	692	0.385	0.5467	Yes
26	TIMM8A	110279	726	0.369	0.5544	Yes
27	LAMP1	2470524	772	0.353	0.5611	Yes
28	CD164	3830594	817	0.336	0.5674	Yes
29	GPX1	4150093	837	0.331	0.5750	Yes
30	DDX3X	2190020	842	0.330	0.5833	Yes
31	UTX	2900017 6770452	1008	0.281	0.5816	Yes
32	PTMA	5570148	1284	0.224	0.5725	Yes
33	GNA13	4590102	1300	0.222	0.5774	Yes
34	CLN3	780368	1339	0.216	0.5810	Yes
35	IGF2R	1570402	1362	0.213	0.5853	Yes
36	GSK3B	5360348	1401	0.203	0.5885	Yes
37	ALG1	2570112	1466	0.190	0.5899	Yes
38	BAX	3830008	1486	0.188	0.5938	Yes
39	RAB24	520601 4540739	1856	0.141	0.5774	No
40	DCTN4	3390010 5550170	1926	0.132	0.5771	No
41	HPS3	6650348	1933	0.131	0.5801	No
42	MCOLN1	4480563	2065	0.120	0.5761	No
43	RPL13A	2680519 5700142	2083	0.119	0.5783	No
44	UBXD3	5050193	2093	0.118	0.5809	No
45	RPA1	360452	2158	0.112	0.5803	No
46	AATF	5220575	2175	0.111	0.5823	No
47	EIF4E	1580403 70133 6380215	2199	0.109	0.5839	No
48	TOPORS	4060592	2257	0.105	0.5835	No
49	PPM1A	1170301 5900273	2311	0.101	0.5833	No
50	RBBP4	6650528	2360	0.097	0.5832	No
51	BRD2	1450300 5340484 6100605	2427	0.093	0.5820	No
52	COMMD8	5890358	2553	0.084	0.5774	No
53	MCM2	5050139	2573	0.083	0.5785	No
54	GABARAP	1450286	2575	0.083	0.5806	No
55	RAI14	770288 1660075	2653	0.078	0.5784	No
56	SLC31A2	1450577	2778	0.071	0.5736	No
57	TNRC15	6760746	2785	0.071	0.5751	No
58	EPC1	1570050 5290095 6900193	2793	0.070	0.5765	No
59	RAB3IL1	380685 5420176	3017	0.060	0.5660	No
60	SIRT1	1190731	3415	0.044	0.5456	No
61	SSR1	5890100	3855	0.033	0.5227	No
62	HTATIP	5360739	4172	0.028	0.5062	No
63	GNB2	2350053	4261	0.026	0.5021	No
64	GGN	1410528 4210082 5290170	4660	0.021	0.4811	No
65	NPTX1	3710736	4705	0.021	0.4793	No
66	CUL5	450142	4869	0.019	0.4709	No
67	ETV1	70735 2940603 5080463	5034	0.017	0.4625	No
68	HOXA1	1190524 5420142	6173	0.010	0.4010	No
69	SYT3	6380017	6219	0.010	0.3988	No
70	FSHR	610041 7040121	6227	0.010	0.3987	No
71	FOXD3	6550156	6263	0.010	0.3971	No
72	SUMF1	730050	6280	0.010	0.3965	No
73	NPM1	4730427	6525	0.009	0.3834	No
74	SC5DL	6650390	6586	0.008	0.3804	No
75	SET	6650286	6653	0.008	0.3770	No
76	POGK	5290315	6957	0.007	0.3608	No
77	CGN	5890139 6370167 6400537	7122	0.006	0.3521	No
78	CPT1A	6350093	7263	0.006	0.3446	No
79	PICALM	1940280	7377	0.005	0.3386	No
80	AKAP1	110148 1740735 2260019 7000563	7402	0.005	0.3375	No
81	FMR1	5050075	7493	0.005	0.3327	No
82	NDUFS1	2650253	7605	0.005	0.3268	No
83	UTY	5890441	7639	0.005	0.3252	No
84	HOXA11	6980133	7789	0.004	0.3172	No
85	TOM1L2	4810465	8126	0.003	0.2991	No
86	SNX5	1570021 6860609	8221	0.003	0.2940	No
87	ADAM10	3780156	8265	0.003	0.2918	No
88	TRIM37	5270091	8308	0.003	0.2896	No
89	PCDHA10	3830725	8631	0.002	0.2722	No
90	HOXC5	1580017	8768	0.002	0.2648	No
91	DNMT3A	4050068 4810717	8894	0.001	0.2581	No
92	AKAP10	2630504 5910577	9066	0.001	0.2488	No
93	XPO1	540707	9074	0.001	0.2485	No
94	AP1S2	780279 4280707	9162	0.001	0.2438	No
95	HOXB5	2900538	9273	0.000	0.2378	No
96	OPRD1	4280138	9395	-0.000	0.2312	No
97	HOXD10	6100039	9478	-0.000	0.2268	No
98	EIF3S10	1190079 3840176	9660	-0.001	0.2170	No
99	SEPT3	3830022 5290079	9839	-0.001	0.2074	No
100	ODC1	5670168	9886	-0.001	0.2049	No
101	EIF4G1	4070446	10028	-0.002	0.1973	No
102	KIAA1715	1190551	10592	-0.003	0.1669	No
103	UBE2B	4780497	10606	-0.003	0.1663	No
104	HNRPD	4120021	10659	-0.003	0.1635	No
105	BHLHB3	3450438	10762	-0.004	0.1581	No
106	ARPC5	1740411 3450300	11201	-0.005	0.1345	No
107	ELAVL3	2850014	11746	-0.007	0.1052	No
108	RNF146	1660735	11931	-0.008	0.0954	No
109	ILF3	940722 3190647 6520110	12000	-0.008	0.0919	No
110	SLC1A7	1990181	12019	-0.008	0.0911	No
111	IRS4	430341 1190450	12085	-0.008	0.0878	No
112	MAX	5220021	12107	-0.008	0.0869	No
113	PHC3	4920332	12231	-0.009	0.0805	No
114	GLA	4610364	12250	-0.009	0.0797	No
115	HOXA7	5910152	12252	-0.009	0.0799	No
116	SLC12A6	610278 1980035 5340671	12683	-0.011	0.0569	No
117	PPP1R3C	2640170	12745	-0.012	0.0539	No
118	RARG	6760136	12788	-0.012	0.0519	No
119	BDNF	2940128 3520368	12799	-0.012	0.0517	No
120	HNRPH2	2630040 5720671	12824	-0.012	0.0507	No
121	BMP4	380113	12935	-0.013	0.0451	No
122	DVL2	6110162	12968	-0.013	0.0437	No
123	RAD9A	110300 1940632 3990390 6040014	13320	-0.016	0.0250	No
124	USP15	610592 3520504	13377	-0.016	0.0224	No
125	NRIP3	1340372	13782	-0.020	0.0010	No
126	HOXA9	610494 4730040 5130601	13846	-0.021	-0.0019	No
127	RBBP6	2320129	13857	-0.021	-0.0019	No
128	SLC36A1	5080242	13936	-0.022	-0.0055	No
129	JMJD2C	3290341	13994	-0.022	-0.0081	No
130	ESR2	6220138	14019	-0.022	-0.0088	No
131	COPZ1	6940100	14060	-0.023	-0.0103	No
132	HOXB7	4540706 4610358	14061	-0.023	-0.0098	No
133	POLR3C	6940546	14234	-0.025	-0.0184	No
134	TOM1	940398 2190053	14302	-0.026	-0.0214	No
135	NEUROD1	3060619	14357	-0.027	-0.0236	No
136	TAF6L	1850056	14358	-0.027	-0.0229	No
137	TESK2	6520524	14381	-0.027	-0.0234	No
138	SLC26A2	2360278	14467	-0.029	-0.0272	No
139	FEN1	1770541	14511	-0.030	-0.0288	No
140	GATA5	430465	14616	-0.032	-0.0336	No
141	NFX1	450504	14641	-0.032	-0.0341	No
142	ARMET	5130670	14699	-0.033	-0.0363	No
143	DUSP7	2940309	14945	-0.039	-0.0486	No
144	EEF1B2	4850400 6130161	14998	-0.040	-0.0504	No
145	SCYL1	5050717	15103	-0.043	-0.0549	No
146	DIRC2	2810494	15106	-0.043	-0.0539	No
147	RGL1	1500097 6900450	15139	-0.044	-0.0545	No
148	GTF2A1	4120138 4920524 5390110 1230397	15351	-0.051	-0.0646	No
149	SGOL1	1980075 5220092 6020711	15433	-0.054	-0.0676	No
150	DHX35	1230440	15593	-0.060	-0.0747	No
151	MYST3	5270500	15679	-0.063	-0.0776	No
152	BRDT	3940102	15695	-0.064	-0.0768	No
153	MRPL27	2060131	15780	-0.068	-0.0796	No
154	MORF4L2	6450133	15852	-0.072	-0.0816	No
155	ZNF318	5890091 6130021	15924	-0.075	-0.0835	No
156	TSC1	1850672	15956	-0.077	-0.0832	No
157	ATP6V1A	6590242	15966	-0.077	-0.0817	No
158	SMYD4	2640403	15978	-0.078	-0.0803	No
159	VPS33A	780113	16081	-0.084	-0.0836	No
160	ISGF3G	3190131 7100142	16518	-0.114	-0.1043	No
161	ZCCHC7	6510592	16946	-0.151	-0.1236	No
162	PRPS1	6350129	17203	-0.183	-0.1327	No
163	VPS16	430064 3390041 6860301	17236	-0.189	-0.1295	No
164	OPRS1	6130128 6290717	17336	-0.210	-0.1295	No
165	ZFYVE26	6860152	17391	-0.218	-0.1268	No
166	HMGN2	3140091	17469	-0.232	-0.1249	No
167	CCAR1	3190092	17984	-0.379	-0.1430	No
168	GTF2H1	2570746 2650148	18098	-0.422	-0.1382	No
169	CHD4	5420059 6130338 6380717	18128	-0.441	-0.1284	No
170	TFRC	4050551	18310	-0.597	-0.1228	No
171	ATF4	730441 1740195	18328	-0.615	-0.1078	No
172	HSPBAP1	4060022	18335	-0.623	-0.0920	No
173	HOXB4	540131	18341	-0.633	-0.0759	No
174	RANBP1	430215 1090180	18348	-0.644	-0.0595	No
175	PLCG2	5720008	18480	-0.981	-0.0413	No
176	TEF	1050050 3120397 4060487	18575	-1.877	0.0022	No