Details for gene set V$SP1_Q2

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	wtNotch
GeneSet	V$SP1_Q2_01
Enrichment Score (ES)	-0.49670625
Normalized Enrichment Score (NES)	-1.2858177
Nominal p-value	0.054862842
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FAF1	2450717 2510121 4730156	2	4.393	0.1342	No
2	PER1	3290315	355	0.638	0.1346	No
3	TPM4	2100059 3850072 4920162	433	0.562	0.1477	No
4	ETV5	110017	464	0.533	0.1623	No
5	TCF12	3610324 7000156	488	0.504	0.1765	No
6	BCL11B	2680673	671	0.394	0.1787	No
7	KLF7	50390	806	0.338	0.1817	No
8	ZFP36	2030605	1033	0.277	0.1779	No
9	BCL6	940100	1204	0.240	0.1761	No
10	BMI1	3830026 2630204	1316	0.220	0.1768	No
11	ACLY	1740609	1337	0.216	0.1823	No
12	RAP1GDS1	50528	1396	0.204	0.1854	No
13	GRB2	6650398	1555	0.177	0.1822	No
14	SNAG1	2760092	1557	0.177	0.1876	No
15	LASP1	1690528 2190341 6420341	1635	0.166	0.1885	No
16	ANP32A	510044 1580095 2680037	1687	0.159	0.1906	No
17	NFE2L1	6130053	1862	0.140	0.1854	No
18	PIP5K2B	6520156 6620541	2139	0.114	0.1739	No
19	ARPC4	2900056	2162	0.112	0.1762	No
20	HIPK1	110193	2248	0.105	0.1748	No
21	ARFIP1	3130601	2307	0.101	0.1747	No
22	HS2ST1	3170088	2309	0.101	0.1778	No
23	LDB1	5270601	2393	0.095	0.1762	No
24	HYAL2	1500152	2560	0.084	0.1697	No
25	GABARAP	1450286	2575	0.083	0.1715	No
26	THRA	6770341 110164 1990600	2635	0.079	0.1707	No
27	SCARF2	5290184	2993	0.061	0.1532	No
28	SH3BP5	7100408	3022	0.060	0.1535	No
29	FUT8	1340068 2340056	3027	0.059	0.1551	No
30	CLPTM1	670181	3079	0.057	0.1541	No
31	KCNN2	990025 3520524	3312	0.048	0.1430	No
32	TBX3	2570672	3581	0.040	0.1297	No
33	CLSTN1	6020019	3612	0.039	0.1293	No
34	BCL7C	460050	3712	0.037	0.1250	No
35	KLF16	4590725	3954	0.031	0.1129	No
36	ASCL2	1400273	4181	0.028	0.1015	No
37	PIAS3	50204 240739 4060524	4411	0.024	0.0898	No
38	RNF24	4230280 6100070 6620739	4519	0.023	0.0847	No
39	GGN	1410528 4210082 5290170	4660	0.021	0.0778	No
40	CAMK2G	630097	4695	0.021	0.0765	No
41	KLF13	4670563	4876	0.019	0.0674	No
42	HSD11B2	5900053	5120	0.017	0.0547	No
43	DUSP15	1850044 6960196	5151	0.017	0.0536	No
44	APLP2	3610037	5163	0.016	0.0535	No
45	GPR3	2970452	5246	0.016	0.0495	No
46	BCL6B	60047	5509	0.014	0.0357	No
47	EDG8	1990441	5633	0.013	0.0294	No
48	LOXL4	6520095	5657	0.013	0.0286	No
49	CDH3	5390112 6860603	5796	0.012	0.0215	No
50	TSNAXIP1	1770270 6180577	5927	0.012	0.0148	No
51	PAK1	4540315	5939	0.011	0.0145	No
52	NXPH4	3830500	6241	0.010	-0.0015	No
53	PTCH2	2900092	6274	0.010	-0.0029	No
54	SP3	3840338	6417	0.009	-0.0103	No
55	FGF5	5270204	6471	0.009	-0.0129	No
56	KCNB1	3610035	6712	0.008	-0.0257	No
57	JUB	5860711 5900500	6732	0.008	-0.0265	No
58	SOX2	630487 2230491	7159	0.006	-0.0494	No
59	ACCN2	6450465	7311	0.006	-0.0574	No
60	TIGD4	1780114	7407	0.005	-0.0624	No
61	KCNMA1	1450402	7598	0.005	-0.0726	No
62	NLK	2030010 2450041	7816	0.004	-0.0842	No
63	ERBB3	5890372	7825	0.004	-0.0845	No
64	ADRB1	6860292	8096	0.003	-0.0991	No
65	NUMBL	6130360 6200333	8200	0.003	-0.1046	No
66	KCNIP2	60088 1780324	8263	0.003	-0.1078	No
67	ADAM10	3780156	8265	0.003	-0.1078	No
68	DNMT3A	4050068 4810717	8894	0.001	-0.1418	No
69	NXPH3	5860292	9153	0.001	-0.1558	No
70	DES	1450341	9284	0.000	-0.1629	No
71	GRIN2A	6550538	9404	-0.000	-0.1693	No
72	CACNA1A	6220164	9520	-0.000	-0.1755	No
73	NOL4	5050446 5360519	9745	-0.001	-0.1877	No
74	CRY1	6770039	9969	-0.002	-0.1997	No
75	PTHLH	5290739	10151	-0.002	-0.2095	No
76	FEV	840369 5860139	10164	-0.002	-0.2100	No
77	AKT2	3850541 3870519	10402	-0.003	-0.2228	No
78	PTPN2	130315	10496	-0.003	-0.2278	No
79	RAB26	5910025	10510	-0.003	-0.2284	No
80	PTPRJ	4010707	10666	-0.004	-0.2367	No
81	BHLHB3	3450438	10762	-0.004	-0.2417	No
82	CHAT	6840603	10937	-0.004	-0.2510	No
83	NTF5	6110239	11188	-0.005	-0.2644	No
84	CLDN11	670338	11266	-0.005	-0.2684	No
85	FSTL5	770280	11320	-0.006	-0.2711	No
86	OSBPL9	2570373	11348	-0.006	-0.2724	No
87	TIMELESS	3710315	11376	-0.006	-0.2737	No
88	GSC	1580685	11421	-0.006	-0.2759	No
89	PHOX2A	6650121	11456	-0.006	-0.2776	No
90	NCOA6	1780333 6450110	11480	-0.006	-0.2787	No
91	OSBP2	6510368	11518	-0.006	-0.2805	No
92	MDS1	6400072	11869	-0.008	-0.2992	No
93	SLC18A3	3060035	11922	-0.008	-0.3018	No
94	NR2F2	3170609 3310577	12061	-0.008	-0.3090	No
95	FZD2	6480154	12135	-0.009	-0.3127	No
96	FGF11	840292	12253	-0.009	-0.3188	No
97	TBX2	1990563	12316	-0.009	-0.3219	No
98	POLR2I	4060400	12652	-0.011	-0.3397	No
99	RANBP10	2340184	12671	-0.011	-0.3403	No
100	ONECUT1	6450136	12705	-0.011	-0.3418	No
101	TITF1	3390554 4540292	12732	-0.012	-0.3428	No
102	BDNF	2940128 3520368	12799	-0.012	-0.3461	No
103	SIX4	6760022	12807	-0.012	-0.3461	No
104	HCN4	1050026	12830	-0.012	-0.3469	No
105	FGF12	1740446 2360037	12857	-0.012	-0.3479	No
106	EFNB3	5570594	13085	-0.014	-0.3598	No
107	CDH2	520435 2450451 2760025 6650477	13151	-0.014	-0.3629	No
108	ENAH	1690292 5700300	13196	-0.015	-0.3648	No
109	SLC35F5	2360369	13217	-0.015	-0.3655	No
110	CDH24	6980592	13255	-0.015	-0.3670	No
111	HRH3	6180040	13286	-0.015	-0.3682	No
112	DLX3	3190497	13310	-0.016	-0.3689	No
113	ARHGEF19	940102	13316	-0.016	-0.3687	No
114	CREB1	1500717 2230358 3610600 6550601	13388	-0.016	-0.3721	No
115	WNT1	4780148	13567	-0.018	-0.3812	No
116	SLITRK5	6590292	13568	-0.018	-0.3807	No
117	TAL1	7040239	13635	-0.018	-0.3837	No
118	RAB2B	6200091	13950	-0.022	-0.4001	No
119	HOXB7	4540706 4610358	14061	-0.023	-0.4053	No
120	TRIM28	380292	14147	-0.024	-0.4092	No
121	HCFC1R1	6350500	14196	-0.025	-0.4110	No
122	CBLN1	5670358	14315	-0.026	-0.4166	No
123	EN1	5360168 7050025	14354	-0.027	-0.4179	No
124	EGLN2	540086	14538	-0.030	-0.4269	No
125	ERG	50154 1770739	14571	-0.031	-0.4276	No
126	SPAG9	580497 2510180 4210685	14622	-0.032	-0.4294	No
127	MAP3K11	7000039	14679	-0.033	-0.4314	No
128	CACNA1D	1740315 4730731	14842	-0.036	-0.4391	No
129	EIF2C1	6900551	14847	-0.036	-0.4382	No
130	ACE	1780161 4920315	14915	-0.038	-0.4407	No
131	WNT5A	840685 3120152	14967	-0.039	-0.4422	No
132	PPRC1	1740441	15021	-0.041	-0.4439	No
133	TADA3L	4210070 5720088 6660333	15044	-0.041	-0.4438	No
134	NTRK3	4050687 4070167 4610026 6100484	15238	-0.047	-0.4528	No
135	PHLDA3	510398	15393	-0.053	-0.4596	No
136	RELB	1400048	15545	-0.058	-0.4660	No
137	ASB7	520242 2450088 3990563 4280538	15556	-0.059	-0.4647	No
138	NFAT5	2510411 5890195 6550152	15573	-0.059	-0.4638	No
139	CHKA	510324	15681	-0.064	-0.4677	No
140	PAX2	6040270 7000133	15775	-0.068	-0.4706	No
141	MAP4K2	4200037	15809	-0.069	-0.4703	No
142	ADCK1	6620707	16261	-0.094	-0.4919	No
143	CORO1C	4570397	16351	-0.101	-0.4936	Yes
144	SESN2	2370019	16378	-0.103	-0.4919	Yes
145	HAP1	1240010 4230079 6980195	16381	-0.103	-0.4888	Yes
146	SIPA1	5220687	16402	-0.105	-0.4867	Yes
147	FBXO3	6760673 6860131	16437	-0.108	-0.4852	Yes
148	CDK5R1	3870161	16529	-0.115	-0.4867	Yes
149	GAS7	2120358 6450494	16586	-0.119	-0.4861	Yes
150	ATP2A2	1090075 3990279	16605	-0.120	-0.4834	Yes
151	LYL1	2900242	16606	-0.120	-0.4797	Yes
152	GFRA1	3610152	16675	-0.126	-0.4796	Yes
153	RELA	3830075	16742	-0.132	-0.4791	Yes
154	IRF2BP1	3170019	16831	-0.139	-0.4797	Yes
155	SNX2	2470068 3360364 6510064	16997	-0.157	-0.4838	Yes
156	BAD	2120148	17045	-0.161	-0.4814	Yes
157	GGA1	70402 380168	17124	-0.172	-0.4804	Yes
158	SMARCD1	3060193 3850184 6400369	17237	-0.190	-0.4807	Yes
159	CGGBP1	4810053	17430	-0.226	-0.4842	Yes
160	VAMP2	2100100	17510	-0.240	-0.4811	Yes
161	RHOG	6760575	17625	-0.262	-0.4793	Yes
162	FBXL19	4570039	17728	-0.290	-0.4759	Yes
163	OAZ2	2810110	17731	-0.291	-0.4672	Yes
164	FBXO34	4010671 5700647 6450026	17764	-0.301	-0.4597	Yes
165	BCL3	3990440	17777	-0.305	-0.4510	Yes
166	SRR	1190465 3800494	17826	-0.320	-0.4438	Yes
167	MXD4	4810113	17988	-0.380	-0.4409	Yes
168	CAMKK1	6370324	17989	-0.380	-0.4293	Yes
169	PAK4	1690152	18156	-0.461	-0.4242	Yes
170	TMEM24	5860039	18227	-0.512	-0.4124	Yes
171	UPF2	4810471	18354	-0.651	-0.3993	Yes
172	PIK4CB	510450 1780452	18365	-0.664	-0.3795	Yes
173	BCL9L	6940053	18389	-0.706	-0.3592	Yes
174	EFEMP2	5550086	18401	-0.727	-0.3376	Yes
175	DDX6	2630025 6770408	18456	-0.888	-0.3133	Yes
176	HSPB2	1990110	18539	-1.389	-0.2753	Yes
177	NOTCH3	3060603	18554	-1.615	-0.2267	Yes
178	TEF	1050050 3120397 4060487	18575	-1.877	-0.1704	Yes
179	SEP15	1780451 2060450 5890451	18596	-2.646	-0.0906	Yes
180	CRYAB	4810619	18600	-2.995	0.0009	Yes