Details for gene set V$RFX1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	wtNotch
GeneSet	V$RFX1_02
Enrichment Score (ES)	-0.4915983
Normalized Enrichment Score (NES)	-1.2462825
Nominal p-value	0.07692308
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ELMO1	110338 1190451 1580148 1850609 2350706 2370369 2450129 3840113 4150184 4280079 6290066 6380435 6770494 7100180	128	1.319	0.0406	No
2	ARRDC4	2810019	237	0.838	0.0650	No
3	ITPR1	3450519	269	0.768	0.0910	No
4	E2F1	5360093	341	0.657	0.1108	No
5	TUBE1	2360079 6520685	360	0.631	0.1326	No
6	BATF	6760390	376	0.615	0.1540	No
7	FXYD6	3870164	477	0.510	0.1669	No
8	NUDC	4780025	586	0.436	0.1768	No
9	CRIP2	1050750	801	0.341	0.1775	No
10	NLGN2	5900592	925	0.305	0.1818	No
11	MAPK10	6110193	1224	0.237	0.1742	No
12	OSBPL2	5690215	1290	0.223	0.1787	No
13	PHC1	520195	1328	0.218	0.1846	No
14	SEMA4B	110347	1334	0.217	0.1922	No
15	KATNAL1	1570538	1400	0.203	0.1960	No
16	STX8	730411 3940427 6290471	1563	0.176	0.1935	No
17	YWHAQ	6760524	1605	0.170	0.1974	No
18	TTLL1	6100541 6350079	1891	0.137	0.1870	No
19	PRKACA	2640731 4050048	1953	0.129	0.1883	No
20	RABL5	770368	2381	0.096	0.1686	No
21	TRPS1	870100	2389	0.095	0.1717	No
22	PER2	3120204 3390593	2588	0.082	0.1639	No
23	CHCHD3	4200044	2658	0.078	0.1630	No
24	TMEM17	5900079	2660	0.077	0.1657	No
25	STX18	4760706	2735	0.074	0.1644	No
26	TUBB4	5310681	2739	0.074	0.1668	No
27	PUM1	6130500	2794	0.070	0.1665	No
28	CRKL	4050427	2922	0.064	0.1619	No
29	PTK2B	4730411	2982	0.062	0.1609	No
30	MTF1	520427 2340364	3201	0.052	0.1510	No
31	CAMK1	3390427 5220086 6940504	3342	0.047	0.1451	No
32	EML1	6980332	3360	0.046	0.1458	No
33	REM1	2340112	3428	0.044	0.1438	No
34	AP1S1	2030471 4570520 6900603	3532	0.041	0.1397	No
35	E2F3	50162 460180	3661	0.038	0.1341	No
36	PCSK1N	4010435	3668	0.038	0.1351	No
37	RNF5	2760088	3689	0.037	0.1354	No
38	PHTF1	7050441	3697	0.037	0.1363	No
39	BLZF1	630088	3796	0.035	0.1323	No
40	MET	2690348	4071	0.030	0.1185	No
41	TUB	3990131 6590129	4141	0.028	0.1158	No
42	GNB2	2350053	4261	0.026	0.1103	No
43	TTC18	2450369 3360053	4320	0.026	0.1081	No
44	CDKL2	2230673 2320594 3440048 4230670	4330	0.025	0.1085	No
45	NFATC4	2470735	4783	0.020	0.0847	No
46	RAGE	730102 2120706 7050315	4804	0.019	0.0843	No
47	ATP1A3	5690674	5061	0.017	0.0711	No
48	CSMD3	1660427 1940687	5105	0.017	0.0694	No
49	DUSP3	1240129 6840215	5357	0.015	0.0563	No
50	KCNJ9	3440292	5868	0.012	0.0291	No
51	DMD	1740041 3990332	5912	0.012	0.0272	No
52	TSNAXIP1	1770270 6180577	5927	0.012	0.0268	No
53	SLC8A3	4120711 6290592	5981	0.011	0.0244	No
54	EFHD2	5050427	6011	0.011	0.0232	No
55	SYT5	4150082	6163	0.010	0.0154	No
56	TSGA10	450594 3130435 4920093	6200	0.010	0.0138	No
57	CAMK2A	1740333 1940112 4150292	6487	0.009	-0.0014	No
58	LRRN3	1450133	6534	0.009	-0.0036	No
59	USP12	6130735 6620280	6608	0.008	-0.0072	No
60	HPCAL1	1980129 2350348	6758	0.008	-0.0150	No
61	GPC3	6180735	6767	0.008	-0.0152	No
62	CHL1	50072 1500021 1580286 6660524	6890	0.007	-0.0215	No
63	GRM1	5890324	6901	0.007	-0.0218	No
64	ACTRT1	4480347	6947	0.007	-0.0240	No
65	ANK2	6510546	7245	0.006	-0.0399	No
66	FMR1	5050075	7493	0.005	-0.0531	No
67	KCNJ16	4780273	7527	0.005	-0.0547	No
68	FGF9	1050195	7535	0.005	-0.0549	No
69	CASKIN1	580035 3710500	7622	0.005	-0.0594	No
70	MGAT4B	130053 6840100	7870	0.004	-0.0726	No
71	MAPRE3	7050504	7981	0.004	-0.0784	No
72	GNB4	3390079 4230035	7988	0.004	-0.0786	No
73	PLEC1	6520292 50500 380075 1570088 2510692 2630497 2680017 2900746 4560497 4850376 6290398 7040471	8100	0.003	-0.0845	No
74	KCNIP2	60088 1780324	8263	0.003	-0.0932	No
75	HNRPF	670138	8374	0.003	-0.0991	No
76	BBS1	4480427	8971	0.001	-0.1313	No
77	MYH2	2340433	8978	0.001	-0.1316	No
78	ITSN1	2640577	9297	0.000	-0.1488	No
79	SPG3A	2760091 3120170	9328	0.000	-0.1505	No
80	FXYD1	1400239 6560129	9542	-0.000	-0.1620	No
81	FXYD7	3120332	9833	-0.001	-0.1777	No
82	THBS3	2360465 4050176	10081	-0.002	-0.1910	No
83	NOV	2850746	10112	-0.002	-0.1925	No
84	RPL17	2690167 5690504	10433	-0.003	-0.2098	No
85	PHOX2B	5270075	10500	-0.003	-0.2132	No
86	CXXC5	840010	10845	-0.004	-0.2317	No
87	SLC17A6	4210576	10970	-0.004	-0.2383	No
88	FGD4	520168 870411 2640253 6550338 6650364	10985	-0.005	-0.2389	No
89	RFX4	3710100 5340215	11260	-0.005	-0.2535	No
90	TM9SF1	2760333	11276	-0.005	-0.2541	No
91	SPARC	1690086	11335	-0.006	-0.2571	No
92	SLC10A2	110537	11405	-0.006	-0.2606	No
93	P518	3610435	11521	-0.006	-0.2666	No
94	ELAVL3	2850014	11746	-0.007	-0.2785	No
95	MPP2	4200438	11772	-0.007	-0.2796	No
96	DRD1IP	1570100	11843	-0.007	-0.2831	No
97	HYDIN	3830427	12285	-0.009	-0.3067	No
98	ICAM5	2350647	12342	-0.010	-0.3094	No
99	RAPGEF3	5050592	12443	-0.010	-0.3144	No
100	HPCAL4	2600484	12587	-0.011	-0.3218	No
101	SYT6	2510280 3850128 4540064	12636	-0.011	-0.3240	No
102	RHOD	1340128	12650	-0.011	-0.3243	No
103	DTNA	1340600 1780731 2340278 2850132	12654	-0.011	-0.3241	No
104	TITF1	3390554 4540292	12732	-0.012	-0.3278	No
105	NME7	60170 1230551 2850333 4200102 4560411 5090647	12751	-0.012	-0.3284	No
106	FOXH1	2060180	12886	-0.012	-0.3352	No
107	GRIN2D	6620372	13030	-0.014	-0.3424	No
108	USF1	4280156 4610114 6370113	13074	-0.014	-0.3443	No
109	PHEX	540162	13134	-0.014	-0.3470	No
110	MAPK11	130452 3120440 3610465	13252	-0.015	-0.3528	No
111	RNF139	2650114 3610450	13550	-0.018	-0.3682	No
112	PCDHB1	2260706	13670	-0.019	-0.3740	No
113	GYLTL1B	2120167 6110575	13719	-0.019	-0.3759	No
114	PCF11	1240180	13721	-0.019	-0.3753	No
115	C7ORF16	4780215	13853	-0.021	-0.3816	No
116	BTBD3	1980041 2510577 3190053 4200746	13856	-0.021	-0.3810	No
117	TNKS	2760563	13961	-0.022	-0.3858	No
118	FKRP	130546	14372	-0.027	-0.4070	No
119	TNKS1BP1	7040184	14556	-0.031	-0.4159	No
120	DNAJA1	1660010 2320358 6840136	14647	-0.032	-0.4196	No
121	AP3M2	6370474	14718	-0.034	-0.4221	No
122	TTR	4150072	14815	-0.036	-0.4261	No
123	CRYZL1	730022 2320044	14872	-0.037	-0.4278	No
124	PTPRR	130121 3990273	14884	-0.037	-0.4270	No
125	NOS1	5860129	14970	-0.039	-0.4302	No
126	PIN1	2970408	15294	-0.049	-0.4460	No
127	ITPKA	6220075	15457	-0.055	-0.4527	No
128	ETS2	360451	15465	-0.055	-0.4511	No
129	DHX40	360672	15558	-0.059	-0.4540	No
130	QTRT1	1340162	15609	-0.061	-0.4545	No
131	TGFB3	1070041	15898	-0.074	-0.4675	No
132	STOML2	1940487	16052	-0.082	-0.4728	No
133	RGS6	6040601	16076	-0.084	-0.4710	No
134	EHD1	3840731	16457	-0.109	-0.4877	Yes
135	STRN4	3440711	16473	-0.111	-0.4845	Yes
136	ODF1	6650110	16494	-0.113	-0.4815	Yes
137	GRWD1	6350528	16540	-0.115	-0.4798	Yes
138	GAS7	2120358 6450494	16586	-0.119	-0.4779	Yes
139	TSGA14	6660465	16619	-0.121	-0.4753	Yes
140	GPR17	5890671	16662	-0.124	-0.4731	Yes
141	PRR3	3440112	16688	-0.127	-0.4699	Yes
142	POLL	5910673 6350672	16961	-0.153	-0.4791	Yes
143	SPATA2	1230215 5910541	16977	-0.155	-0.4744	Yes
144	BAD	2120148	17045	-0.161	-0.4722	Yes
145	L3MBTL2	6020341	17367	-0.215	-0.4818	Yes
146	PPT2	2340059 3450148	17423	-0.225	-0.4767	Yes
147	ZFYVE1	60440	17427	-0.225	-0.4687	Yes
148	HMGN2	3140091	17469	-0.232	-0.4626	Yes
149	ZSWIM1	7050239	17497	-0.238	-0.4555	Yes
150	SH3GLB2	2030086	17498	-0.238	-0.4469	Yes
151	PBXIP1	70131	17566	-0.250	-0.4416	Yes
152	RNF40	3610397	17595	-0.257	-0.4338	Yes
153	EBNA1BP2	50369 1400433 6040019	17808	-0.315	-0.4339	Yes
154	PAK4	1690152	18156	-0.461	-0.4361	Yes
155	RHOBTB2	1570129 2320253 3520253	18270	-0.551	-0.4224	Yes
156	NCALD	730176	18313	-0.599	-0.4030	Yes
157	NELF	5910026	18382	-0.700	-0.3815	Yes
158	TMIE	2370164	18552	-1.580	-0.3337	Yes
159	GRASP	3940450 5910735	18567	-1.761	-0.2710	Yes
160	ADK	380338 520180 5270524	18592	-2.536	-0.1808	Yes
161	PKIG	2030300 5260255	18615	-5.051	0.0001	Yes