Details for gene set V$CART1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$CART1_01
Enrichment Score (ES)	0.66446036
Normalized Enrichment Score (NES)	1.6093229
Nominal p-value	0.0017452007
FDR q-value	0.21411553
FWER p-Value	0.489

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PRDX2	6760095 4010619 5340577	0	5.791	0.3238	Yes
2	CLDN4	4920739	45	1.980	0.4322	Yes
3	ACACA	2490612 2680369	235	0.843	0.4691	Yes
4	NFIX	2450152	284	0.743	0.5080	Yes
5	SERTAD4	130593	399	0.589	0.5348	Yes
6	ZNF219	5900471	603	0.428	0.5477	Yes
7	KCTD15	2810735	604	0.426	0.5716	Yes
8	NPHP4	1190433	750	0.360	0.5838	Yes
9	GPX1	4150093	837	0.331	0.5977	Yes
10	CDKN2C	5050750 5130148	843	0.330	0.6159	Yes
11	TCEB3	5890156	872	0.321	0.6323	Yes
12	HSD3B7	1410129	1082	0.265	0.6358	Yes
13	CBL	6380068	1202	0.241	0.6428	Yes
14	BCL6	940100	1204	0.240	0.6562	Yes
15	PTMA	5570148	1284	0.224	0.6645	Yes
16	CABLES1	610253 2190504	2157	0.112	0.6235	No
17	TRAF3	5690647	2197	0.109	0.6275	No
18	CFL2	380239 6200368	2401	0.094	0.6218	No
19	TACSTD2	6660341	2406	0.094	0.6268	No
20	PTPRC	130402 5290148	2453	0.091	0.6294	No
21	WARS2	840605 4590280	2696	0.076	0.6206	No
22	NRAS	6900577	2751	0.073	0.6217	No
23	SLC16A9	6220497	2878	0.066	0.6186	No
24	BACE2	4060170 5690100 6220133	2905	0.065	0.6208	No
25	FYN	2100468 4760520 4850687	3063	0.058	0.6155	No
26	SOX4	2260091	3095	0.056	0.6170	No
27	DSCR1	4540048 6220039	3141	0.055	0.6176	No
28	DNASE1L3	670086	3182	0.053	0.6184	No
29	STC1	360161	3492	0.042	0.6040	No
30	PELI2	1940364	3665	0.038	0.5968	No
31	FGF13	630575 1570440 5360121	3690	0.037	0.5976	No
32	PDGFRA	2940332	3717	0.037	0.5983	No
33	LMO4	3800746	3754	0.036	0.5983	No
34	HESX1	4050746	4109	0.029	0.5808	No
35	ACADSB	520170	4291	0.026	0.5724	No
36	GPR85	5130750 5910020	4476	0.023	0.5638	No
37	A2BP1	2370390 4590593 5550014	4557	0.022	0.5607	No
38	MEF2C	670025 780338	4966	0.018	0.5396	No
39	SOX5	2370576 2900167 3190128 5050528	5108	0.017	0.5329	No
40	BNC2	4810603	5388	0.015	0.5186	No
41	PAK3	4210136	5641	0.013	0.5057	No
42	ZFPM2	460072	5656	0.013	0.5057	No
43	ZIC3	380020	5734	0.013	0.5022	No
44	RIMS2	670725	6070	0.011	0.4847	No
45	PCDHB15	520725	6243	0.010	0.4759	No
46	ESRRG	4010181	6290	0.010	0.4740	No
47	CALB2	6130170 6590368	6346	0.009	0.4715	No
48	HOXA3	3610632 6020358	6457	0.009	0.4661	No
49	FOXB1	4920270 5290463	6562	0.008	0.4609	No
50	PDGFC	4200133	6578	0.008	0.4606	No
51	IRX2	870438	6606	0.008	0.4596	No
52	LOXHD1	520039	6762	0.008	0.4516	No
53	ACCN1	2060139 2190541	6839	0.007	0.4479	No
54	CHD2	4070039	6907	0.007	0.4447	No
55	PBX1	6660301	6961	0.007	0.4422	No
56	LRFN5	6650088	7295	0.006	0.4245	No
57	ACCN2	6450465	7311	0.006	0.4240	No
58	CDH6	4730541	7487	0.005	0.4148	No
59	PRDM1	3170347 3520301	7566	0.005	0.4108	No
60	CLCA3	6510167	7567	0.005	0.4111	No
61	HIPK3	4540601	7738	0.004	0.4021	No
62	HOXA11	6980133	7789	0.004	0.3997	No
63	NETO1	3830722 4200332	8108	0.003	0.3826	No
64	UNC13B	130735	8556	0.002	0.3586	No
65	EFEMP1	5860324	8585	0.002	0.3572	No
66	POGZ	870348 7040286	8907	0.001	0.3398	No
67	NEUROD6	4670731	8956	0.001	0.3373	No
68	MYH2	2340433	8978	0.001	0.3362	No
69	RFX3	520121 4280519 5570519 6100184	9067	0.001	0.3315	No
70	CALD1	1770129 1940397	9165	0.001	0.3263	No
71	WNT3	2360685	9219	0.000	0.3234	No
72	HOXB5	2900538	9273	0.000	0.3206	No
73	JPH3	780397	9344	0.000	0.3168	No
74	GABRA6	4120520	9401	-0.000	0.3138	No
75	MOXD1	2450301	9635	-0.001	0.3012	No
76	NOL4	5050446 5360519	9745	-0.001	0.2953	No
77	MAL2	2760706	9804	-0.001	0.2922	No
78	EYA1	1450278 5220390	9830	-0.001	0.2910	No
79	KYNU	1410435	10242	-0.002	0.2688	No
80	NPTX2	70021	10333	-0.003	0.2641	No
81	DLL4	6400403	10357	-0.003	0.2630	No
82	PHOX2B	5270075	10500	-0.003	0.2555	No
83	BAMBI	6650463	10787	-0.004	0.2402	No
84	CREB5	2320368	10828	-0.004	0.2383	No
85	HOXA5	6840026	11121	-0.005	0.2227	No
86	MYT1	6770524	11180	-0.005	0.2199	No
87	ELP4	1230576	11402	-0.006	0.2082	No
88	LGALS12	3940242	11483	-0.006	0.2042	No
89	SLC26A3	380750	11662	-0.007	0.1950	No
90	TEAD3	2320142	11675	-0.007	0.1947	No
91	ROR1	6220026	11680	-0.007	0.1949	No
92	GBX2	3940736	11950	-0.008	0.1808	No
93	OTP	2630070	12173	-0.009	0.1692	No
94	CRTAC1	840408	12251	-0.009	0.1656	No
95	OGG1	1940279	12363	-0.010	0.1601	No
96	MTUS1	780348 4920609	12437	-0.010	0.1567	No
97	CNTNAP4	3830364 5340347	12448	-0.010	0.1567	No
98	RNF12	6860717	12490	-0.010	0.1551	No
99	LECT1	2640528	12552	-0.011	0.1524	No
100	ACBD5	3440397 6020600	12559	-0.011	0.1527	No
101	CDKL5	2450070	12682	-0.011	0.1467	No
102	CYP46A1	2470332	12892	-0.013	0.1361	No
103	GRM8	4780082	12903	-0.013	0.1362	No
104	PPIL5	3850619	12958	-0.013	0.1340	No
105	KLHL13	6590731	12978	-0.013	0.1337	No
106	PRSS12	1230364 6220059	13198	-0.015	0.1227	No
107	SLITRK5	6590292	13568	-0.018	0.1037	No
108	PVRL3	1400324 4200593 6650128	13576	-0.018	0.1043	No
109	PAPPA	4230463	13716	-0.019	0.0979	No
110	PCF11	1240180	13721	-0.019	0.0987	No
111	CHRDL1	1580037 6380204	13729	-0.019	0.0994	No
112	EPHA7	1190288 4010278	13765	-0.020	0.0986	No
113	FOXP2	3520561 4150372 4760524	13790	-0.020	0.0985	No
114	HOXB3	520292	13944	-0.022	0.0914	No
115	RAB2B	6200091	13950	-0.022	0.0923	No
116	HOXB6	4210739	14022	-0.023	0.0897	No
117	HOXB7	4540706 4610358	14061	-0.023	0.0890	No
118	POU2F1	70577 430373 4850324 5910056	14111	-0.024	0.0876	No
119	PRKAG1	6450091	14134	-0.024	0.0878	No
120	EN1	5360168 7050025	14354	-0.027	0.0774	No
121	ELF5	3140156 5220020	14440	-0.028	0.0744	No
122	PRRX1	4120193 4480390	14497	-0.030	0.0731	No
123	ERG	50154 1770739	14571	-0.031	0.0708	No
124	PTF1A	6450377	14612	-0.032	0.0704	No
125	LRRC15	3940609	14626	-0.032	0.0715	No
126	RAB6A	3840463 4780731	14635	-0.032	0.0729	No
127	BBX	6520112	14715	-0.034	0.0705	No
128	MID1	4070114 4760458	14765	-0.034	0.0697	No
129	RCHY1	3800739	14769	-0.035	0.0715	No
130	TTR	4150072	14815	-0.036	0.0711	No
131	SALL1	5420020 7050195	14926	-0.038	0.0672	No
132	BCL11A	6860369	14956	-0.039	0.0679	No
133	NOS1	5860129	14970	-0.039	0.0694	No
134	GOLGA1	5860471	14987	-0.040	0.0707	No
135	C1QTNF6	2030592	15317	-0.050	0.0557	No
136	RPS19	5860066	15364	-0.052	0.0561	No
137	RFXANK	4010341	15511	-0.057	0.0514	No
138	ARRB1	2650670 2690195 4920592 6660121	15625	-0.061	0.0487	No
139	STOML2	1940487	16052	-0.082	0.0302	No
140	YARS	70739	16063	-0.083	0.0343	No
141	MAP2K5	2030440	16079	-0.084	0.0382	No
142	ADAM11	1050008 3130494	16214	-0.091	0.0361	No
143	SEPHS1	4230725	16259	-0.094	0.0389	No
144	ITPR3	4010632	17074	-0.165	0.0041	No
145	ZNF148	6420403	17182	-0.181	0.0084	No
146	ZDHHC21	2370338	17275	-0.198	0.0145	No
147	MBNL2	3450707	17902	-0.348	0.0001	No
148	OTX2	1190471	18377	-0.689	0.0129	No