Details for gene set CTAWWWATA_V$RSRFC4

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	wtNotch
GeneSet	CTAWWWATA_V$RSRFC4_Q2
Enrichment Score (ES)	-0.4955461
Normalized Enrichment Score (NES)	-1.3318045
Nominal p-value	0.020997375
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CKB	4560632	109	1.364	0.0386	No
2	SIPA1L1	50292	250	0.812	0.0576	No
3	FOXP1	6510433	308	0.705	0.0775	No
4	ANKMY2	780600 2230440	332	0.666	0.0980	No
5	PER1	3290315	355	0.638	0.1177	No
6	S100A4	3780113	476	0.510	0.1278	No
7	MGST3	3450338 5290736	536	0.474	0.1401	No
8	THBS2	2850136	717	0.371	0.1424	No
9	NDRG2	450403	730	0.368	0.1538	No
10	RPA3	5700136	888	0.316	0.1556	No
11	TRIB2	4120605	1027	0.277	0.1571	No
12	CPT1B	940086 2690433	1427	0.199	0.1419	No
13	TMEPAI	1340253	1734	0.154	0.1303	No
14	SMAD3	6450671	1739	0.154	0.1351	No
15	HIST1H1A	1450131	1823	0.144	0.1353	No
16	IGF1	1990193 3130377 3290280	2010	0.125	0.1292	No
17	TPM2	520735 3870390	2100	0.117	0.1282	No
18	ELAVL4	50735 3360086 5220167	2105	0.117	0.1318	No
19	HIST1H1C	3870603	2180	0.111	0.1314	No
20	TCEA3	1770020	2182	0.111	0.1350	No
21	MYH3	110400	2241	0.106	0.1353	No
22	RAP2C	1690132	2333	0.099	0.1335	No
23	RAP2B	2640575 4120427	2334	0.099	0.1368	No
24	CFL2	380239 6200368	2401	0.094	0.1363	No
25	PTPRO	1940576 6370332	2502	0.088	0.1337	No
26	ITGA10	6330438	2556	0.084	0.1336	No
27	CAPN3	1980451 6940047	2569	0.083	0.1356	No
28	USP2	1190292 1240253 4850035	2577	0.083	0.1379	No
29	SLC30A1	3120068	2868	0.067	0.1243	No
30	CDC42EP2	540079 2970138	2914	0.064	0.1240	No
31	KTN1	70446 3450609 4560048	2919	0.064	0.1259	No
32	CD24	1780091	2954	0.063	0.1261	No
33	EGR2	3800403	3085	0.057	0.1208	No
34	SDHC	3140347 6100156	3120	0.055	0.1208	No
35	LMCD1	1740484 2190097	3164	0.053	0.1202	No
36	NCOR1	3710132	3186	0.052	0.1208	No
37	NNT	540253 1170471 5550092 6760397	3465	0.043	0.1070	No
38	STC1	360161	3492	0.042	0.1070	No
39	SYNPO2L	5390719	3498	0.042	0.1081	No
40	ART3	2760348 3710372	3540	0.041	0.1072	No
41	NR2F1	4120528 360402	3553	0.041	0.1079	No
42	MAB21L2	1770605	3597	0.039	0.1069	No
43	FBXO40	2190286 5670253	3610	0.039	0.1075	No
44	SLC25A4	2360519	3705	0.037	0.1036	No
45	MRPS23	3610551	3736	0.036	0.1031	No
46	TNFRSF17	5890408	3742	0.036	0.1040	No
47	HDAC9	1990010 2260133	3838	0.034	0.1000	No
48	ANKRD23	1780164	3877	0.033	0.0990	No
49	TRIM8	6130441	3901	0.032	0.0988	No
50	ATF3	1940546	3907	0.032	0.0995	No
51	SOX9	5720681	3922	0.032	0.0998	No
52	JUN	840170	3990	0.031	0.0972	No
53	ITGA7	1230739	4018	0.030	0.0967	No
54	ARL6IP2	770494 4590176 6620427	4068	0.030	0.0950	No
55	RASGRF1	730068 6940402	4242	0.027	0.0865	No
56	PANK1	670091 6220605	4257	0.026	0.0866	No
57	MYOZ2	1050253	4461	0.024	0.0763	No
58	SLC7A1	2450193 2710241	4531	0.023	0.0733	No
59	BRUNOL4	4490452 5080451	4606	0.022	0.0699	No
60	CMYA1	6900632	4608	0.022	0.0706	No
61	HRC	2690563	4641	0.021	0.0696	No
62	SUPT4H1	6200056	4789	0.020	0.0622	No
63	GABRB2	870059	4960	0.018	0.0535	No
64	NME5	6770672	5005	0.018	0.0517	No
65	NOG	2320609	5038	0.017	0.0505	No
66	SOX5	2370576 2900167 3190128 5050528	5108	0.017	0.0473	No
67	PCDH11X	540301	5118	0.017	0.0474	No
68	TRPM4	6980270	5124	0.017	0.0477	No
69	ADAMTSL1	2970092	5130	0.017	0.0479	No
70	ASPH	360722 1940039 2100066 2340121 2650113 2810064 2970008 3140040 3800750 4210014 4280133 4590035 4760433 6370671 6940338	5131	0.017	0.0485	No
71	PLSCR4	6760010	5225	0.016	0.0439	No
72	ACTN3	3140541 6480598	5251	0.016	0.0431	No
73	BNC2	4810603	5388	0.015	0.0362	No
74	IFNB1	1400142	5524	0.014	0.0293	No
75	KCNN1	4200725	5543	0.014	0.0287	No
76	LOXL4	6520095	5657	0.013	0.0230	No
77	SGCD	2940685 5080753	5777	0.012	0.0169	No
78	SNCAIP	4010551	5834	0.012	0.0143	No
79	DMD	1740041 3990332	5912	0.012	0.0104	No
80	HAO1	7050093	5913	0.012	0.0108	No
81	ESR1	4060372 5860193	5980	0.011	0.0076	No
82	SLC8A3	4120711 6290592	5981	0.011	0.0080	No
83	COL8A1	4590050	6067	0.011	0.0037	No
84	RIMS2	670725	6070	0.011	0.0039	No
85	LIF	1410373 2060129 3990338	6105	0.010	0.0024	No
86	RASGRP3	6020504	6154	0.010	0.0001	No
87	SMPX	6590440	6400	0.009	-0.0129	No
88	COL10A1	2360307	6455	0.009	-0.0156	No
89	POU4F1	2260315	6650	0.008	-0.0259	No
90	DRD3	4780402	6739	0.008	-0.0304	No
91	TRDN	1580411	6753	0.008	-0.0309	No
92	SYTL2	580097 5390576 6770603	6786	0.008	-0.0324	No
93	SLITRK4	5910022	6794	0.008	-0.0325	No
94	CYP2E1	4480209	6987	0.007	-0.0427	No
95	CYP26B1	2630142	7027	0.007	-0.0446	No
96	DNAJA4	780528	7030	0.007	-0.0445	No
97	TNNI1	3710040	7109	0.006	-0.0486	No
98	HOXD4	5900301	7306	0.006	-0.0590	No
99	EDG1	4200619	7353	0.006	-0.0614	No
100	SIX3	3830402	7360	0.006	-0.0615	No
101	AKAP1	110148 1740735 2260019 7000563	7402	0.005	-0.0636	No
102	CPNE7	4060465	7673	0.005	-0.0781	No
103	NPTXR	4060685 450438	7691	0.005	-0.0789	No
104	KBTBD5	6350025	7748	0.004	-0.0818	No
105	SLC2A4	540441	7754	0.004	-0.0819	No
106	USP47	2640497	7797	0.004	-0.0841	No
107	CNTN1	3800204	8042	0.004	-0.0973	No
108	RHOBTB3	4010687	8114	0.003	-0.1010	No
109	MYOM2	5290593	8198	0.003	-0.1054	No
110	PRX	2260400 4200347	8209	0.003	-0.1059	No
111	NR4A1	6290161	8225	0.003	-0.1066	No
112	GPM6B	6220458	8321	0.003	-0.1117	No
113	SLC12A5	1980692	8343	0.003	-0.1127	No
114	HIST1H2BA	2450059	8344	0.003	-0.1127	No
115	GPR153	4120332	8375	0.003	-0.1142	No
116	LRRTM1	1690324	8381	0.003	-0.1144	No
117	PPARGC1A	4670040	8390	0.003	-0.1147	No
118	DMP1	4760398	8396	0.003	-0.1149	No
119	CHN2	870528	8453	0.002	-0.1179	No
120	NEK2	2120520	8502	0.002	-0.1204	No
121	TRHR	7040368	8547	0.002	-0.1228	No
122	TWIST1	5130619	8586	0.002	-0.1248	No
123	EEF1A2	2260162 5290086	8692	0.002	-0.1304	No
124	TLK2	1170161	8891	0.001	-0.1412	No
125	PPP1R3A	6760288	8962	0.001	-0.1450	No
126	MYH2	2340433	8978	0.001	-0.1457	No
127	MGAT3	2260593	9145	0.001	-0.1548	No
128	FAP	4560019	9179	0.000	-0.1565	No
129	DES	1450341	9284	0.000	-0.1622	No
130	RARA	4050161	9286	0.000	-0.1623	No
131	ITSN1	2640577	9297	0.000	-0.1628	No
132	STAC	5890162	9299	0.000	-0.1628	No
133	LRRTM4	5910100	9427	-0.000	-0.1698	No
134	MYL1	2450707	9434	-0.000	-0.1701	No
135	HSPB3	460129	9741	-0.001	-0.1867	No
136	EYA1	1450278 5220390	9830	-0.001	-0.1915	No
137	HIST1H2AA	7050100	10048	-0.002	-0.2032	No
138	DKK4	4480008	10065	-0.002	-0.2040	No
139	RHOQ	520161	10176	-0.002	-0.2100	No
140	RALY	940427 1740066	10251	-0.002	-0.2139	No
141	CD36	5890575	10371	-0.003	-0.2203	No
142	FGF4	6550528	10372	-0.003	-0.2202	No
143	MAT2A	4070026 4730079 6020280	10491	-0.003	-0.2265	No
144	FBXW11	6450632	10645	-0.003	-0.2348	No
145	ARR3	130142 3850132	10734	-0.004	-0.2394	No
146	BAMBI	6650463	10787	-0.004	-0.2421	No
147	MYBPC2	1980368	11021	-0.005	-0.2547	No
148	MEOX2	6400288	11042	-0.005	-0.2556	No
149	KCNJ2	630019	11058	-0.005	-0.2563	No
150	TYRO3	3130193	11078	-0.005	-0.2572	No
151	FGB	7000010	11115	-0.005	-0.2590	No
152	ACTA1	840538	11213	-0.005	-0.2641	No
153	PHOSPHO1	460184	11235	-0.005	-0.2651	No
154	IRS1	1190204	11349	-0.006	-0.2710	No
155	NTS	380300 2120592	11356	-0.006	-0.2712	No
156	DPYSL3	1580594	11367	-0.006	-0.2715	No
157	GSC	1580685	11421	-0.006	-0.2742	No
158	IL4	6020537	11441	-0.006	-0.2751	No
159	AMD1	6290128	11451	-0.006	-0.2754	No
160	RASGEF1B	3130121 5670524	11469	-0.006	-0.2761	No
161	MB	730019	11536	-0.006	-0.2795	No
162	GPR133	840053	11704	-0.007	-0.2883	No
163	ADCYAP1	520086	11754	-0.007	-0.2908	No
164	GRIN2B	3800333	11956	-0.008	-0.3015	No
165	MYF6	2690576	11981	-0.008	-0.3025	No
166	NR0B2	2470692	12083	-0.008	-0.3077	No
167	MYOZ1	2760670	12132	-0.009	-0.3101	No
168	DIRAS1	2640270	12170	-0.009	-0.3118	No
169	CASQ2	3170136	12255	-0.009	-0.3161	No
170	TNNC2	3840079	12332	-0.010	-0.3199	No
171	PURA	3870156	12399	-0.010	-0.3232	No
172	ASB4	2100064 3060059	12455	-0.010	-0.3258	No
173	EPC2	2470095	12499	-0.010	-0.3278	No
174	CDC42EP3	2480138	12505	-0.010	-0.3278	No
175	TNNI3K	5890072	12567	-0.011	-0.3307	No
176	GPC4	5910408	12568	-0.011	-0.3304	No
177	PITX2	870537 2690139	12585	-0.011	-0.3309	No
178	RHOBTB1	1410010	12607	-0.011	-0.3317	No
179	PVALB	5570450	12615	-0.011	-0.3317	No
180	MYH4	1940102	12637	-0.011	-0.3325	No
181	FGF12	1740446 2360037	12857	-0.012	-0.3440	No
182	ASB16	1940152	13017	-0.013	-0.3523	No
183	GRIN2D	6620372	13030	-0.014	-0.3525	No
184	HOXC4	1940193	13037	-0.014	-0.3524	No
185	CACNB1	2940427 3710487	13058	-0.014	-0.3530	No
186	POU3F4	870274	13143	-0.014	-0.3571	No
187	AMPD1	3520132	13501	-0.017	-0.3760	No
188	SMYD1	460477	13518	-0.017	-0.3763	No
189	PCDHB1	2260706	13670	-0.019	-0.3839	No
190	HAPLN1	580398	13672	-0.019	-0.3834	No
191	MUSK	1190113	13675	-0.019	-0.3829	No
192	EPHA7	1190288 4010278	13765	-0.020	-0.3871	No
193	CLCN1	840161	13899	-0.021	-0.3936	No
194	HOXB7	4540706 4610358	14061	-0.023	-0.4016	No
195	COL13A1	4120079	14081	-0.023	-0.4019	No
196	PRKAG1	6450091	14134	-0.024	-0.4040	No
197	TTYH2	1450397 3870100 6550347	14318	-0.026	-0.4131	No
198	GCG	6220735	14448	-0.029	-0.4191	No
199	HSPB1	6760435	14489	-0.029	-0.4204	No
200	PRRX1	4120193 4480390	14497	-0.030	-0.4198	No
201	TNNI3	7000093	14738	-0.034	-0.4317	No
202	SV2A	1450039 5570685	14762	-0.034	-0.4319	No
203	LZTS2	2260440	14768	-0.035	-0.4310	No
204	ZIC4	1500082	15082	-0.042	-0.4467	No
205	ELMO2	4540685	15116	-0.043	-0.4470	No
206	RG9MTD2	6520100	15147	-0.044	-0.4472	No
207	EFHD1	4070358	15188	-0.046	-0.4479	No
208	STAG2	4540132	15201	-0.046	-0.4471	No
209	CRTAP	3990725	15436	-0.054	-0.4581	No
210	CACNA2D3	4010184	15529	-0.058	-0.4612	No
211	NFAT5	2510411 5890195 6550152	15573	-0.059	-0.4616	No
212	EIF5A	1500059 5290022 6370026	15583	-0.060	-0.4601	No
213	ABLIM1	580170 3710338 6520504	15670	-0.063	-0.4627	No
214	POFUT1	1570458	15815	-0.070	-0.4683	No
215	OPN3	5670037	15866	-0.072	-0.4687	No
216	TSC1	1850672	15956	-0.077	-0.4710	No
217	CASQ1	6290035 7000707	15981	-0.078	-0.4698	No
218	NFIL3	4070377	16059	-0.083	-0.4713	No
219	MAP2K5	2030440	16079	-0.084	-0.4696	No
220	AOC2	520348 3120008	16083	-0.084	-0.4670	No
221	NFATC1	510400 2320348 4050600 6180161 6290136 6620086	16205	-0.091	-0.4706	No
222	ADAM11	1050008 3130494	16214	-0.091	-0.4680	No
223	PPP2R2A	2900014 5700575	16288	-0.096	-0.4689	No
224	PLAGL2	1770148	16329	-0.099	-0.4678	No
225	AQP1	450338 6020292	16384	-0.104	-0.4673	No
226	RCOR1	5360717	16510	-0.114	-0.4704	No
227	TOB2	1240465	16567	-0.117	-0.4697	No
228	TTC17	2470440	16648	-0.123	-0.4700	No
229	ART5	7040019	16872	-0.143	-0.4775	No
230	BZW2	940079	16924	-0.149	-0.4754	No
231	HIST1H4A	1940600	17295	-0.202	-0.4889	Yes
232	RASGRP2	2970333	17360	-0.213	-0.4854	Yes
233	RRAD	4280129	17442	-0.228	-0.4824	Yes
234	GPR23	4070152	17455	-0.230	-0.4755	Yes
235	INPPL1	110717 3120164	17486	-0.235	-0.4695	Yes
236	SLC26A6	4810575	17492	-0.236	-0.4620	Yes
237	SH3GLB2	2030086	17498	-0.238	-0.4545	Yes
238	LRRC20	6290373	17530	-0.243	-0.4483	Yes
239	PIK3R3	1770333	17613	-0.260	-0.4442	Yes
240	CKM	1450524	17637	-0.267	-0.4367	Yes
241	TIMP2	4780609	17647	-0.269	-0.4284	Yes
242	HDAC7A	2570278	17687	-0.278	-0.4215	Yes
243	WFDC1	4670072	17699	-0.281	-0.4129	Yes
244	ATP2A3	130440 2190451	17858	-0.331	-0.4107	Yes
245	PDE6D	3130537 3390014	17977	-0.375	-0.4048	Yes
246	PHKA2	610035 1090044	17982	-0.377	-0.3927	Yes
247	CUL3	1850520	18023	-0.392	-0.3820	Yes
248	ALDOA	6290672	18195	-0.486	-0.3755	Yes
249	HOXB4	540131	18341	-0.633	-0.3627	Yes
250	SLC12A8	4810092	18362	-0.661	-0.3422	Yes
251	BCL9L	6940053	18389	-0.706	-0.3205	Yes
252	ENO3	5270136	18453	-0.871	-0.2954	Yes
253	HES1	4810280	18482	-0.988	-0.2647	Yes
254	CSRP3	450180 2060019 1740497 2060152 4540519 6200148	18564	-1.750	-0.2119	Yes
255	TEF	1050050 3120397 4060487	18575	-1.877	-0.1510	Yes
256	TPM3	670600 3170296 5670167 6650471	18609	-4.686	0.0004	Yes