Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	NETPATH_BCR
Enrichment Score (ES)	0.61542386
Normalized Enrichment Score (NES)	1.4584616
Nominal p-value	0.010291595
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GTF2I	2470750 3870408 3830369 3990082 4610138	7	3.986	0.1741	Yes
2	CCND2	5340167	59	1.612	0.2419	Yes
3	CDK2	130484 2260301 4010088 5050110	75	1.505	0.3069	Yes
4	FCGR2B	780750	245	0.825	0.3338	Yes
5	PTK2	1780148	252	0.808	0.3689	Yes
6	BCL2L11	780044 4200601	293	0.733	0.3988	Yes
7	ITK	2230592	434	0.562	0.4158	Yes
8	CCNE1	110064	435	0.561	0.4403	Yes
9	PPP3R1	1190041 1570487	487	0.504	0.4596	Yes
10	SH3BP2	610131	581	0.438	0.4738	Yes
11	CCND3	380528 730500	590	0.433	0.4923	Yes
12	NFKBIA	1570152	786	0.347	0.4969	Yes
13	CDK4	540075 4540600	832	0.332	0.5090	Yes
14	LAT2	5340440	931	0.304	0.5170	Yes
15	NFATC3	5050520	935	0.303	0.5301	Yes
16	CD72	2340369	945	0.297	0.5426	Yes
17	PDPK1	6650168	961	0.293	0.5546	Yes
18	CASP7	4210156	993	0.285	0.5654	Yes
19	MAPK8	2640195	1063	0.270	0.5735	Yes
20	PIP5K1C	5890164 6510148	1148	0.251	0.5799	Yes
21	CBL	6380068	1202	0.241	0.5876	Yes
22	BCL6	940100	1204	0.240	0.5981	Yes
23	GSK3B	5360348	1401	0.203	0.5964	Yes
24	BAX	3830008	1486	0.188	0.6001	Yes
25	GRB2	6650398	1555	0.177	0.6041	Yes
26	BTK	3130044	1576	0.175	0.6107	Yes
27	NEDD9	1740373 4230053	1625	0.167	0.6154	Yes
28	CDK6	4920253	2151	0.113	0.5920	No
29	CHUK	7050736	2267	0.104	0.5903	No
30	RB1	5900338	2280	0.103	0.5942	No
31	CD79B	1450066 3390358	2352	0.098	0.5946	No
32	MAPK1	3190193 6200253	2368	0.097	0.5981	No
33	GAB1	2970156	2398	0.094	0.6006	No
34	MAPK14	5290731	2442	0.092	0.6023	No
35	PTPRC	130402 5290148	2453	0.091	0.6058	No
36	CRKL	4050427	2922	0.064	0.5833	No
37	PTK2B	4730411	2982	0.062	0.5828	No
38	FYN	2100468 4760520 4850687	3063	0.058	0.5810	No
39	RAPGEF1	60040 4590670	3185	0.053	0.5768	No
40	CD79A	3450563	3401	0.045	0.5671	No
41	BLNK	70288 6590092	3535	0.041	0.5618	No
42	JUN	840170	3990	0.031	0.5386	No
43	PLCG1	6020369	4062	0.030	0.5360	No
44	CD22	3120239	4139	0.028	0.5332	No
45	BCL2	730132 1570736 2470138 3800044 4810037 5690068 5860504 6650164	4210	0.027	0.5306	No
46	CD81	5270093	4509	0.023	0.5155	No
47	PRKD1	1410706 5090438	4512	0.023	0.5164	No
48	PRKCD	770592	4555	0.022	0.5151	No
49	DOK3	130347 3870167	4609	0.022	0.5132	No
50	MAP3K7	6040068	4923	0.018	0.4971	No
51	PIK3AP1	6760008	5159	0.016	0.4851	No
52	RPS6KB1	1450427 5080110 6200563	5175	0.016	0.4850	No
53	CARD11	70338	5527	0.014	0.4666	No
54	RASGRP3	6020504	6154	0.010	0.4332	No
55	PRKCE	5700053	6191	0.010	0.4317	No
56	SYK	6940133	6233	0.010	0.4299	No
57	CD19	6940692	6315	0.010	0.4260	No
58	BLK	1940128 5390053	6594	0.008	0.4113	No
59	BCAR1	1340215	6775	0.008	0.4019	No
60	SHC1	2900731 3170504 6520537	7016	0.007	0.3892	No
61	PTPN11	2230100 2470180 6100528	7100	0.006	0.3850	No
62	HCK	4230592	8298	0.003	0.3205	No
63	ACTR3	1400497	8814	0.001	0.2927	No
64	CDK7	2640451	9152	0.001	0.2745	No
65	AKT1	5290746	9501	-0.000	0.2557	No
66	CR2	2850332 6450397	9615	-0.001	0.2496	No
67	PIK3R1	4730671	9982	-0.002	0.2299	No
68	GAB2	1410280 2340520 4280040	10514	-0.003	0.2014	No
69	CRK	1230162 4780128	10527	-0.003	0.2008	No
70	PRKCQ	2260170 3870193	10743	-0.004	0.1894	No
71	LCP2	2680066 6650707	10865	-0.004	0.1830	No
72	MAPK4	870142	10984	-0.005	0.1768	No
73	DOK1	1050279 2680112 5220273	11529	-0.006	0.1477	No
74	TEC	1400576	11773	-0.007	0.1349	No
75	ITPR2	5360128	11774	-0.007	0.1352	No
76	CASP9	60577 1170368 2060576	12289	-0.009	0.1078	No
77	NCK1	6200575 6510050	12298	-0.009	0.1078	No
78	PDK2	2690017	12429	-0.010	0.1012	No
79	LYN	6040600	12529	-0.010	0.0963	No
80	PIK3R2	1660193	12709	-0.011	0.0872	No
81	ATF2	2260348 2480441	12975	-0.013	0.0734	No
82	ACTR2	1170332	13265	-0.015	0.0585	No
83	PTPN18	2640537	13288	-0.015	0.0579	No
84	CREB1	1500717 2230358 3610600 6550601	13388	-0.016	0.0533	No
85	NFATC2	70450 540097	13983	-0.022	0.0222	No
86	BCL10	2360397	14211	-0.025	0.0110	No
87	IKBKG	3450092 3840377 6590592	14249	-0.026	0.0101	No
88	SOS1	7050338	14900	-0.037	-0.0234	No
89	PPP3CA	4760332 6760092	15017	-0.041	-0.0279	No
90	DAPP1	2480086 2970300 4480494	15020	-0.041	-0.0262	No
91	CCNA2	5290075	15143	-0.044	-0.0309	No
92	CBLB	3520465 4670348	15328	-0.050	-0.0386	No
93	RPS6KA1	4120647	15400	-0.053	-0.0401	No
94	MAP4K1	4060692	15404	-0.053	-0.0380	No
95	CYCS	2030072	15708	-0.064	-0.0515	No
96	LCK	3360142	15797	-0.069	-0.0533	No
97	REL	360707	15811	-0.069	-0.0510	No
98	VAV2	3610725 5890717	15998	-0.079	-0.0575	No
99	NFATC1	510400 2320348 4050600 6180161 6290136 6620086	16205	-0.091	-0.0647	No
100	IKBKB	6840072	16337	-0.100	-0.0674	No
101	RELA	3830075	16742	-0.132	-0.0835	No
102	VAV1	6020487	16797	-0.137	-0.0804	No
103	GSK3A	3140735	16905	-0.147	-0.0798	No
104	CSK	6350593	16935	-0.150	-0.0748	No
105	HDAC5	2370035 6370139	16947	-0.151	-0.0688	No
106	PTPN6	4230128	17084	-0.167	-0.0688	No
107	SOS2	2060722	17212	-0.185	-0.0675	No
108	RPS6	2060168	17457	-0.230	-0.0707	No
109	ZAP70	1410494 2260504	17495	-0.237	-0.0623	No
110	MAPK3	580161 4780035	17816	-0.318	-0.0657	No
111	HCLS1	7100309	17834	-0.324	-0.0524	No
112	MAPKAPK2	2850500	17873	-0.336	-0.0398	No
113	WAS	5270193	17888	-0.343	-0.0255	No
114	RASA1	1240315	17940	-0.363	-0.0124	No
115	CD5	6590338	18504	-1.117	0.0061	No