Details for gene set RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY
Enrichment Score (ES)	0.62343025
Normalized Enrichment Score (NES)	1.5982594
Nominal p-value	0.0
FDR q-value	0.25402278
FWER p-Value	0.805

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GTF2I	2470750 3870408 3830369 3990082 4610138	2	4.021	0.1253	Yes
2	UHRF1	1410273 1660242	78	1.595	0.1710	Yes
3	ATF4	730441 1740195	80	1.582	0.2202	Yes
4	CBFB	1850551 2650035	91	1.525	0.2673	Yes
5	TCF12	3610324 7000156	122	1.384	0.3088	Yes
6	CTCF	5340017	161	1.243	0.3455	Yes
7	NFIX	2450152	250	1.032	0.3729	Yes
8	HTATSF1	110026	266	1.005	0.4034	Yes
9	MED6	6840500	478	0.778	0.4163	Yes
10	TBP	1450601 2810193	575	0.707	0.4331	Yes
11	TAF1A	2510707	694	0.635	0.4465	Yes
12	LITAF	6940671	702	0.632	0.4658	Yes
13	RXRB	1780040 5340438	789	0.589	0.4796	Yes
14	KLF13	4670563	830	0.570	0.4952	Yes
15	E2F2	5270609 5570377 7000465	857	0.559	0.5112	Yes
16	CSDA	2470092 3060053 4780056	868	0.556	0.5280	Yes
17	MED12	4920095	903	0.542	0.5430	Yes
18	PKNOX1	4210452	971	0.511	0.5553	Yes
19	VEZF1	6900592	1083	0.467	0.5639	Yes
20	MYEF2	6860484	1230	0.415	0.5689	Yes
21	CIITA	2650242	1296	0.392	0.5776	Yes
22	TCF7	3800736 5390181	1345	0.374	0.5867	Yes
23	TAF11	5720538	1409	0.357	0.5944	Yes
24	ILF2	2900253	1452	0.347	0.6030	Yes
25	TAF13	4050692	1576	0.314	0.6061	Yes
26	IRF2	5390044	1594	0.309	0.6148	Yes
27	HMGN1	2650026	1610	0.303	0.6234	Yes
28	TBX19	5270390	1768	0.264	0.6232	No
29	MED4	4480050	2150	0.182	0.6082	No
30	PPARGC1B	3290114	2269	0.161	0.6069	No
31	TAF12	3710746 4920300 6180603	2358	0.147	0.6067	No
32	GTF2B	6860685	2553	0.122	0.6000	No
33	ZNF148	6420403	2563	0.122	0.6033	No
34	TCERG1	2350551 4540397 5220746	2854	0.092	0.5905	No
35	NFAT5	2510411 5890195 6550152	2987	0.081	0.5859	No
36	GATA4	1410215 2690609	3159	0.069	0.5788	No
37	SOX8	580026	3219	0.065	0.5776	No
38	BRD8	1170463 2900075 4050397 6590332	3229	0.065	0.5792	No
39	GTF2F1	360093	3260	0.063	0.5795	No
40	ATF2	2260348 2480441	3350	0.057	0.5765	No
41	TCF7L2	2190348 5220113	3759	0.037	0.5555	No
42	SOX12	1780037	3779	0.036	0.5556	No
43	ZBTB7B	450070	3883	0.033	0.5511	No
44	MLLT1	1170048 6100068	3936	0.031	0.5492	No
45	KLF5	3840348	4211	0.023	0.5351	No
46	PPARGC1A	4670040	4434	0.019	0.5237	No
47	GLIS1	840471	4493	0.018	0.5211	No
48	NR0B1	6510750	4589	0.016	0.5165	No
49	JUN	840170	5012	0.011	0.4940	No
50	SOX21	1050110 4670041 6660338	5042	0.011	0.4928	No
51	ABT1	6980601	5363	0.009	0.4757	No
52	NOTCH2	2570397	5426	0.009	0.4726	No
53	USF2	3870368 5570348 6940039	5452	0.008	0.4715	No
54	ONECUT2	1340008	5516	0.008	0.4684	No
55	RAX	4590600	5682	0.007	0.4597	No
56	MEF2C	670025 780338	5836	0.007	0.4516	No
57	NRL	4210110	6467	0.004	0.4176	No
58	ISL1	4810239	6585	0.004	0.4114	No
59	TBX5	2900132 6370484	6908	0.003	0.3941	No
60	HOXA1	1190524 5420142	6973	0.003	0.3907	No
61	TCEA1	5340070	7202	0.002	0.3784	No
62	SREBF1	4780333	7392	0.001	0.3682	No
63	TCEAL1	870577	7746	0.000	0.3491	No
64	NR2F2	3170609 3310577	8001	-0.000	0.3354	No
65	RXRA	3800471	8027	-0.000	0.3340	No
66	SP4	3850176	8094	-0.000	0.3305	No
67	LHX1	1690100	8263	-0.001	0.3214	No
68	TCF15	1690400	8314	-0.001	0.3187	No
69	ZFPM2	460072	8343	-0.001	0.3173	No
70	LHX3	670164 1770280	8414	-0.001	0.3135	No
71	HOXD10	6100039	8453	-0.001	0.3115	No
72	NKX2-8	50022	8458	-0.001	0.3113	No
73	NR5A2	1690180 6900050	8472	-0.001	0.3106	No
74	NFYC	1400746	9181	-0.003	0.2724	No
75	PURA	3870156	9190	-0.003	0.2721	No
76	TEAD4	1850239 6380519	9396	-0.004	0.2611	No
77	TEAD3	2320142	9597	-0.004	0.2504	No
78	SMARCA5	6620050	9652	-0.004	0.2476	No
79	TAF4	1450170	9704	-0.005	0.2450	No
80	PROP1	1980008	9766	-0.005	0.2419	No
81	TIAL1	4150048 6510605	9938	-0.005	0.2328	No
82	PDX1	6660647	10117	-0.006	0.2233	No
83	SOX15	2470603	10161	-0.006	0.2212	No
84	SP2	6400026	10163	-0.006	0.2213	No
85	HOXC13	4070722	10535	-0.007	0.2015	No
86	MYOD1	1230731	10549	-0.007	0.2010	No
87	FOXN1	4730075	10893	-0.008	0.1827	No
88	SOX18	2320086	11053	-0.009	0.1744	No
89	CNOT2	520546 2060397 4610543 5550113	11190	-0.010	0.1673	No
90	RFX1	540373	11362	-0.010	0.1584	No
91	HIF1A	5670605	11601	-0.012	0.1458	No
92	THRAP3	6180309	11717	-0.012	0.1400	No
93	HOXD9	2570181	11877	-0.013	0.1318	No
94	GTF2A1	4120138 4920524 5390110 1230397	12476	-0.018	0.1000	No
95	USF1	4280156 4610114 6370113	12511	-0.018	0.0987	No
96	TBX3	2570672	12640	-0.019	0.0924	No
97	MYF5	1050739	12668	-0.019	0.0915	No
98	ZBTB32	5900397	12692	-0.020	0.0909	No
99	SOX30	2690725 4730309	12813	-0.021	0.0850	No
100	GFI1B	4570131	12936	-0.022	0.0791	No
101	UTF1	5700593	12950	-0.022	0.0791	No
102	RFX3	520121 4280519 5570519 6100184	12984	-0.023	0.0780	No
103	IRF4	610133	13074	-0.024	0.0740	No
104	ELL2	6420091	13143	-0.025	0.0710	No
105	NR2F1	4120528 360402	13146	-0.025	0.0717	No
106	HOXC10	5360170	13521	-0.030	0.0524	No
107	PROX1	4210193	13533	-0.031	0.0528	No
108	ASH1L	2510402 5360687 6650685	13797	-0.035	0.0396	No
109	FOS	1850315	13810	-0.035	0.0401	No
110	RUNX2	1400193 4230215	13845	-0.036	0.0394	No
111	ERF	110551 1770278	13929	-0.038	0.0360	No
112	IRF3	3290601 5860154 6180162	13940	-0.038	0.0367	No
113	GTF2H1	2570746 2650148	14039	-0.040	0.0326	No
114	NEUROD1	3060619	14295	-0.047	0.0203	No
115	TBX10	2690156 2640086	14309	-0.047	0.0210	No
116	IRF8	610161	14446	-0.051	0.0153	No
117	SOX9	5720681	14497	-0.052	0.0142	No
118	BTF3	6940279	14592	-0.055	0.0108	No
119	TAF9	1850458 3830136	14599	-0.056	0.0122	No
120	TAF7	6400504 6660601	14647	-0.057	0.0115	No
121	SREBF2	3390692	14798	-0.063	0.0053	No
122	GMEB2	6520170	15025	-0.073	-0.0046	No
123	NFRKB	3130538	15371	-0.094	-0.0204	No
124	EPAS1	5290156	15387	-0.094	-0.0183	No
125	DBP	4200270	15413	-0.096	-0.0166	No
126	GABPA	2360017 4780301 4850279	15550	-0.108	-0.0206	No
127	RELA	3830075	15553	-0.108	-0.0174	No
128	TAF10	2760020	15583	-0.111	-0.0155	No
129	HNF4A	6620440	15585	-0.111	-0.0120	No
130	SRF	70139 2320039	15671	-0.119	-0.0129	No
131	DEK	1050451 4560037	15814	-0.134	-0.0165	No
132	TAF1C	5890433 1170176	15993	-0.158	-0.0212	No
133	GTF2F2	2690546	16408	-0.216	-0.0368	No
134	VPS72	2450181	16728	-0.260	-0.0460	No
135	IRF7	1570605	16875	-0.286	-0.0450	No
136	JUNB	4230048	16903	-0.291	-0.0374	No
137	HTATIP2	3120465	17045	-0.318	-0.0351	No
138	ATF5	5670685	17284	-0.368	-0.0365	No
139	BATF	6760390	17874	-0.573	-0.0505	No
140	SUPT3H	6650139	17915	-0.594	-0.0342	No
141	TAF6	2470541 4280497	18125	-0.760	-0.0218	No
142	TEF	1050050 3120397 4060487	18489	-1.549	0.0069	No