Details for gene set POSITIVE_REGULATION_OF_NUCLEOBASE__NUCLEOSIDE__NUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	POSITIVE_REGULATION_OF_NUCLEOBASE__NUCLEOSIDE__NUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS
Enrichment Score (ES)	0.62843627
Normalized Enrichment Score (NES)	1.5657476
Nominal p-value	0.0
FDR q-value	0.33014148
FWER p-Value	0.94

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARID1A	2630022 1690551 4810110	0	5.910	0.1692	Yes
2	ILF3	940722 3190647 6520110	40	2.079	0.2266	Yes
3	XRCC6	2850450 3870528	65	1.682	0.2735	Yes
4	ATF4	730441 1740195	80	1.582	0.3181	Yes
5	ATF7IP	2690176 6770021	87	1.539	0.3618	Yes
6	TNFRSF1A	1090390 6520735	100	1.464	0.4031	Yes
7	CTCF	5340017	161	1.243	0.4354	Yes
8	ELF1	4780450	249	1.032	0.4603	Yes
9	SMARCC1	5080019 7100047	471	0.786	0.4708	Yes
10	MED6	6840500	478	0.778	0.4928	Yes
11	RUNX1	3840711	697	0.634	0.4992	Yes
12	HNRPAB	540504	740	0.612	0.5144	Yes
13	CCNH	3190347	764	0.603	0.5304	Yes
14	MNAT1	730292 2350364	823	0.572	0.5437	Yes
15	ARHGEF11	1780288	847	0.563	0.5586	Yes
16	MAML1	2760008	876	0.553	0.5729	Yes
17	MED12	4920095	903	0.542	0.5870	Yes
18	CREBBP	5690035 7040050	909	0.541	0.6022	Yes
19	MYO6	2190332	1416	0.355	0.5850	Yes
20	ILF2	2900253	1452	0.347	0.5931	Yes
21	YAF2	940053	1490	0.338	0.6007	Yes
22	TCF4	520021	1564	0.320	0.6060	Yes
23	SMAD2	4200592	1581	0.312	0.6140	Yes
24	RSF1	1580097	1591	0.309	0.6224	Yes
25	SP1	6590017	1637	0.296	0.6284	Yes
26	ARNTL	3170463	1993	0.211	0.6153	No
27	NSD1	4560519 4780672	2092	0.193	0.6155	No
28	TNFSF13	2650170	2140	0.184	0.6182	No
29	PPARGC1B	3290114	2269	0.161	0.6159	No
30	PHF5A	2690519	2645	0.113	0.5989	No
31	CAMKK2	5270047	3087	0.074	0.5772	No
32	GATA4	1410215 2690609	3159	0.069	0.5753	No
33	MRPL12	3120112	3303	0.060	0.5693	No
34	BCL10	2360397	3328	0.059	0.5697	No
35	CITED2	5670114 5130088	3359	0.057	0.5697	No
36	NRIP1	3190039	3388	0.055	0.5698	No
37	YWHAH	1660133 2810053	3745	0.038	0.5516	No
38	BPTF	940541 4540152	4111	0.025	0.5326	No
39	PPARGC1A	4670040	4434	0.019	0.5158	No
40	GLIS1	840471	4493	0.018	0.5131	No
41	ACVR1	6840671	4525	0.017	0.5119	No
42	FOXP3	940707 1850692	4608	0.016	0.5080	No
43	FOXD3	6550156	4790	0.014	0.4986	No
44	RGMB	670504 4570450	4870	0.013	0.4947	No
45	SMARCA1	4230315	5194	0.010	0.4775	No
46	RORB	6400035	5304	0.009	0.4719	No
47	MYST4	1400563 2570687 3360458 6840402	5351	0.009	0.4697	No
48	UBB	4810138	5647	0.008	0.4539	No
49	ESRRG	4010181	5662	0.007	0.4534	No
50	PAX8	5050301 5290164	6032	0.006	0.4336	No
51	FOXF2	1240091	6199	0.005	0.4248	No
52	FOXE1	4810164	6444	0.004	0.4117	No
53	MKL2	5700204	6731	0.003	0.3964	No
54	TBX5	2900132 6370484	6908	0.003	0.3869	No
55	GLI1	4560176	7168	0.002	0.3730	No
56	BMP6	2100128	7649	0.001	0.3471	No
57	RXRA	3800471	8027	-0.000	0.3267	No
58	ARNT2	1740594	8081	-0.000	0.3238	No
59	ELL3	1770484	8389	-0.001	0.3073	No
60	NFATC2	70450 540097	8399	-0.001	0.3068	No
61	ABCA1	6290156	9021	-0.003	0.2733	No
62	TRERF1	6370017 6940138	9032	-0.003	0.2729	No
63	NCOA6	1780333 6450110	9535	-0.004	0.2459	No
64	EHF	4560088	9536	-0.004	0.2460	No
65	NPAS2	770670	9836	-0.005	0.2300	No
66	FOXH1	2060180	10511	-0.007	0.1937	No
67	CDK7	2640451	11027	-0.009	0.1662	No
68	EREG	50519 4920129	11266	-0.010	0.1536	No
69	NOTCH4	2450040 6370707	11342	-0.010	0.1498	No
70	HIF1A	5670605	11601	-0.012	0.1362	No
71	THRAP3	6180309	11717	-0.012	0.1303	No
72	ACVRL1	3290600	11913	-0.013	0.1202	No
73	RAD51	6110450 6980280	11989	-0.014	0.1165	No
74	NUFIP1	6350241	12136	-0.015	0.1091	No
75	GLI2	3060632	12387	-0.017	0.0960	No
76	UTF1	5700593	12950	-0.022	0.0663	No
77	IRF4	610133	13074	-0.024	0.0603	No
78	IL4	6020537	13283	-0.026	0.0498	No
79	FOXO3	2510484 4480451	13380	-0.028	0.0454	No
80	CREB5	2320368	13431	-0.028	0.0436	No
81	GTF2H1	2570746 2650148	14039	-0.040	0.0119	No
82	PLAGL1	3190082 6200193	14148	-0.043	0.0073	No
83	GLIS2	4150471 4810170	14250	-0.046	0.0031	No
84	SMARCD3	4070497	14286	-0.047	0.0026	No
85	TCF3	5080022	14375	-0.049	-0.0008	No
86	NARG1	5910563 6350095	14397	-0.050	-0.0005	No
87	ERCC3	6900008	14917	-0.068	-0.0266	No
88	DYRK1B	5860706	15024	-0.073	-0.0303	No
89	ELF4	4850193	15183	-0.082	-0.0365	No
90	NUP62	1240128	15205	-0.083	-0.0352	No
91	UBE2N	520369 2900047	15209	-0.083	-0.0330	No
92	CLOCK	1410070 2940292 3390075	15257	-0.086	-0.0331	No
93	HIVEP3	3990551	15375	-0.094	-0.0367	No
94	EPAS1	5290156	15387	-0.094	-0.0346	No
95	HNF4A	6620440	15585	-0.111	-0.0421	No
96	BCL3	3990440	15669	-0.119	-0.0432	No
97	EPC1	1570050 5290095 6900193	15826	-0.135	-0.0477	No
98	TGFB1	1940162	15875	-0.140	-0.0463	No
99	MAP2K3	5570193	15974	-0.155	-0.0472	No
100	SPI1	1410397	15991	-0.158	-0.0435	No
101	MYST1	2190397	15998	-0.159	-0.0393	No
102	TRIM28	380292	16232	-0.189	-0.0465	No
103	MYST3	5270500	16625	-0.244	-0.0607	No
104	BMP7	870039	16732	-0.261	-0.0590	No
105	RBM14	5340731 5690315	16739	-0.262	-0.0518	No
106	SUPT5H	4150546	16987	-0.306	-0.0564	No
107	SUPT4H1	6200056	17021	-0.312	-0.0492	No
108	SQSTM1	6550056	17055	-0.319	-0.0418	No
109	SCAP	3800706	17258	-0.361	-0.0424	No
110	SMAD3	6450671	17586	-0.454	-0.0471	No
111	TP53	6130707	17702	-0.490	-0.0393	No
112	SMARCD1	3060193 3850184 6400369	17805	-0.536	-0.0294	No
113	ERCC2	2360750 4060390 6550138	17996	-0.639	-0.0214	No
114	HMGA1	6580408	18109	-0.743	-0.0062	No
115	EGR1	4610347	18402	-1.171	0.0116	No