Details for gene set NEURON_DIFFERENTIATION[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	NEURON_DIFFERENTIATION
Enrichment Score (ES)	-0.67974746
Normalized Enrichment Score (NES)	-1.5423332
Nominal p-value	0.005328597
FDR q-value	0.6964611
FWER p-Value	0.995

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CYFIP1	5690082	1370	0.370	-0.0443	No
2	APOE	4200671	1666	0.289	-0.0370	No
3	LDB1	5270601	1854	0.244	-0.0275	No
4	YWHAG	3780341	2010	0.207	-0.0193	No
5	CDK5R1	3870161	2270	0.161	-0.0204	No
6	NRTN	2450551	2308	0.155	-0.0100	No
7	MAPT	360706 1230706	2634	0.115	-0.0183	No
8	AMIGO1	6180215	2926	0.086	-0.0270	No
9	THY1	5910162	3234	0.064	-0.0384	No
10	KLK8	60035 2340440	3593	0.044	-0.0542	No
11	YWHAH	1660133 2810053	3745	0.038	-0.0593	No
12	RTN1	4150452 4850176	4478	0.018	-0.0973	No
13	SHH	5570400	5085	0.011	-0.1291	No
14	SMARCA1	4230315	5194	0.010	-0.1341	No
15	BAIAP2	460347 4730600	5253	0.010	-0.1365	No
16	OPHN1	2360100	5454	0.008	-0.1466	No
17	KCNIP2	60088 1780324	5497	0.008	-0.1482	No
18	UBB	4810138	5647	0.008	-0.1556	No
19	PARD3	3390324 5390541	5758	0.007	-0.1610	No
20	FARP2	4670037	6172	0.005	-0.1829	No
21	TGFB2	4920292	6205	0.005	-0.1842	No
22	NLGN1	5670278	6991	0.003	-0.2263	No
23	ROBO1	3710398	7658	0.001	-0.2621	No
24	NRXN1	460408 5340270 6370066	7774	0.000	-0.2683	No
25	SLIT2	1940037	7987	-0.000	-0.2797	No
26	FEZ1	2630725 4810324	8059	-0.000	-0.2835	No
27	UNC5C	2640056	8598	-0.002	-0.3124	No
28	ATP2B2	3780397	8810	-0.002	-0.3236	No
29	PARD6B	4120600	8843	-0.002	-0.3252	No
30	BTG4	4060020	9485	-0.004	-0.3594	No
31	GHRL	2360619 6760438	9531	-0.004	-0.3615	No
32	NRXN3	1400546 3360471	9610	-0.004	-0.3654	No
33	LMX1B	1260561	9744	-0.005	-0.3722	No
34	ROBO2	450136	9829	-0.005	-0.3763	No
35	NTNG1	50270 1410427 4810333	9966	-0.005	-0.3832	No
36	S100B	6520088	10009	-0.006	-0.3850	No
37	POU6F2	5270451	10101	-0.006	-0.3894	No
38	RTN4RL2	6450609	10387	-0.007	-0.4043	No
39	CNTN4	1780300 5570577 6370019	10810	-0.008	-0.4264	No
40	PCSK9	3120044	10812	-0.008	-0.4258	No
41	POU4F1	2260315	11314	-0.010	-0.4519	No
42	NRP2	4070400 5860041 6650446	11583	-0.012	-0.4655	No
43	GDNF	4050487 5720739	12012	-0.014	-0.4874	No
44	BAI1	6350053	12041	-0.014	-0.4878	No
45	SEMA3B	5570563	12259	-0.016	-0.4982	No
46	GLI2	3060632	12387	-0.017	-0.5037	No
47	CDK5	940348	13260	-0.026	-0.5486	No
48	MDGA1	1170139	13286	-0.026	-0.5479	No
49	RND1	5080300	13357	-0.027	-0.5495	No
50	SLIT1	50110	13774	-0.035	-0.5691	No
51	ALS2	3130546 6400070	14467	-0.051	-0.6023	No
52	DPYSL5	4900333	14480	-0.052	-0.5988	No
53	OTX2	1190471	14907	-0.067	-0.6164	No
54	BRSK2	4050292	15142	-0.079	-0.6227	No
55	NTNG2	1770438 6380408	15445	-0.099	-0.6310	No
56	PAX2	6040270 7000133	15831	-0.135	-0.6410	No
57	SEMA4F	3850056	16551	-0.234	-0.6610	Yes
58	PPT1	6450440	16634	-0.245	-0.6458	Yes
59	LST1	5420372	16854	-0.282	-0.6351	Yes
60	SPON2	2680136	17077	-0.322	-0.6213	Yes
61	FEZ2	5910181	17249	-0.358	-0.6018	Yes
62	RTN4RL1	2630368	17688	-0.486	-0.5865	Yes
63	MAP1S	1980463	17738	-0.504	-0.5488	Yes
64	RTN4	50725 630647 870097 870184	17755	-0.511	-0.5087	Yes
65	AGRN	6770152	17971	-0.624	-0.4704	Yes
66	TRAPPC4	520044	17982	-0.630	-0.4205	Yes
67	PICK1	3990500 4920500	18465	-1.411	-0.3335	Yes
68	DTX1	5900372	18604	-4.268	0.0006	Yes