Details for gene set NEUROGENESIS[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	NEUROGENESIS
Enrichment Score (ES)	-0.6226786
Normalized Enrichment Score (NES)	-1.4742079
Nominal p-value	0.020676691
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CLN5	630767	1289	0.395	-0.0422	No
2	CYFIP1	5690082	1370	0.370	-0.0210	No
3	APOE	4200671	1666	0.289	-0.0169	No
4	EIF2B2	4290048	1669	0.289	0.0029	No
5	LDB1	5270601	1854	0.244	0.0099	No
6	YWHAG	3780341	2010	0.207	0.0158	No
7	CDK5R1	3870161	2270	0.161	0.0130	No
8	NRTN	2450551	2308	0.155	0.0217	No
9	MAPT	360706 1230706	2634	0.115	0.0122	No
10	AMIGO1	6180215	2926	0.086	0.0024	No
11	THY1	5910162	3234	0.064	-0.0097	No
12	RACGAP1	3990162 6620736	3421	0.053	-0.0160	No
13	KLK8	60035 2340440	3593	0.044	-0.0222	No
14	YWHAH	1660133 2810053	3745	0.038	-0.0278	No
15	NPTN	6200373	3798	0.036	-0.0281	No
16	CDK6	4920253	3844	0.034	-0.0282	No
17	RTN1	4150452 4850176	4478	0.018	-0.0611	No
18	SHH	5570400	5085	0.011	-0.0930	No
19	SMARCA1	4230315	5194	0.010	-0.0982	No
20	BAIAP2	460347 4730600	5253	0.010	-0.1006	No
21	OPHN1	2360100	5454	0.008	-0.1108	No
22	KCNIP2	60088 1780324	5497	0.008	-0.1125	No
23	UBB	4810138	5647	0.008	-0.1201	No
24	PARD3	3390324 5390541	5758	0.007	-0.1255	No
25	FARP2	4670037	6172	0.005	-0.1474	No
26	TGFB2	4920292	6205	0.005	-0.1488	No
27	ARTN	360670 1170333 1500520	6251	0.005	-0.1509	No
28	NLGN1	5670278	6991	0.003	-0.1906	No
29	ROBO1	3710398	7658	0.001	-0.2265	No
30	NRXN1	460408 5340270 6370066	7774	0.000	-0.2327	No
31	SLIT2	1940037	7987	-0.000	-0.2441	No
32	FEZ1	2630725 4810324	8059	-0.000	-0.2479	No
33	UNC5C	2640056	8598	-0.002	-0.2768	No
34	NF2	4150735 6450139	8710	-0.002	-0.2827	No
35	ATP2B2	3780397	8810	-0.002	-0.2879	No
36	PARD6B	4120600	8843	-0.002	-0.2894	No
37	NF1	6980433	9083	-0.003	-0.3021	No
38	BTG4	4060020	9485	-0.004	-0.3235	No
39	GHRL	2360619 6760438	9531	-0.004	-0.3256	No
40	NRXN3	1400546 3360471	9610	-0.004	-0.3296	No
41	LMX1B	1260561	9744	-0.005	-0.3364	No
42	ROBO2	450136	9829	-0.005	-0.3406	No
43	NTNG1	50270 1410427 4810333	9966	-0.005	-0.3476	No
44	S100B	6520088	10009	-0.006	-0.3494	No
45	POU6F2	5270451	10101	-0.006	-0.3539	No
46	RTN4RL2	6450609	10387	-0.007	-0.3688	No
47	CIT	2370601	10638	-0.008	-0.3818	No
48	CNTN4	1780300 5570577 6370019	10810	-0.008	-0.3905	No
49	PCSK9	3120044	10812	-0.008	-0.3900	No
50	POU4F1	2260315	11314	-0.010	-0.4163	No
51	NRP2	4070400 5860041 6650446	11583	-0.012	-0.4299	No
52	GDNF	4050487 5720739	12012	-0.014	-0.4521	No
53	BAI1	6350053	12041	-0.014	-0.4526	No
54	SEMA3B	5570563	12259	-0.016	-0.4632	No
55	GLI2	3060632	12387	-0.017	-0.4689	No
56	CDK5	940348	13260	-0.026	-0.5141	No
57	MDGA1	1170139	13286	-0.026	-0.5137	No
58	RND1	5080300	13357	-0.027	-0.5156	No
59	SLIT1	50110	13774	-0.035	-0.5356	No
60	ALS2	3130546 6400070	14467	-0.051	-0.5694	No
61	DPYSL5	4900333	14480	-0.052	-0.5665	No
62	EIF2B3	3290463	14810	-0.063	-0.5798	No
63	OTX2	1190471	14907	-0.067	-0.5804	No
64	BRSK2	4050292	15142	-0.079	-0.5875	No
65	NTNG2	1770438 6380408	15445	-0.099	-0.5970	No
66	SOD1	5890070	15543	-0.107	-0.5948	No
67	EIF2B1	4610082 7040242	15630	-0.115	-0.5915	No
68	EIF2B4	5270082	15778	-0.130	-0.5904	No
69	PAX2	6040270 7000133	15831	-0.135	-0.5839	No
70	SEMA4F	3850056	16551	-0.234	-0.6065	Yes
71	PPT1	6450440	16634	-0.245	-0.5940	Yes
72	LST1	5420372	16854	-0.282	-0.5863	Yes
73	SPON2	2680136	17077	-0.322	-0.5760	Yes
74	SERPINF1	7040367	17119	-0.329	-0.5555	Yes
75	FEZ2	5910181	17249	-0.358	-0.5377	Yes
76	EIF2B5	430315 6900400	17424	-0.403	-0.5192	Yes
77	RTN4RL1	2630368	17688	-0.486	-0.4998	Yes
78	MAP1S	1980463	17738	-0.504	-0.4676	Yes
79	RTN4	50725 630647 870097 870184	17755	-0.511	-0.4331	Yes
80	AGRN	6770152	17971	-0.624	-0.4016	Yes
81	TRAPPC4	520044	17982	-0.630	-0.3586	Yes
82	PICK1	3990500 4920500	18465	-1.411	-0.2870	Yes
83	DTX1	5900372	18604	-4.268	0.0006	Yes