Details for gene set GLYCOPROTEIN_METABOLIC

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	GLYCOPROTEIN_METABOLIC_PROCESS
Enrichment Score (ES)	-0.62492156
Normalized Enrichment Score (NES)	-1.4452047
Nominal p-value	0.0144665465
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COG3	3840746	1207	0.422	-0.0376	No
2	OGT	2360131 4610333	1440	0.350	-0.0273	No
3	STT3A	580139	1754	0.267	-0.0268	No
4	LARGE	6940068	1763	0.266	-0.0099	No
5	GALNT2	2260279 4060239	1884	0.236	-0.0009	No
6	POMT1	2680047 3440040 6660114	1928	0.227	0.0116	No
7	MAN1A2	5700435 5720114	2367	0.146	-0.0025	No
8	TXNDC4	450537	2558	0.122	-0.0048	No
9	ABCG1	60692	2568	0.121	0.0026	No
10	ALG8	4150497 4780500 6290563	2917	0.087	-0.0105	No
11	BACE2	4060170 5690100 6220133	2966	0.083	-0.0077	No
12	FUT8	1340068 2340056	3140	0.070	-0.0125	No
13	FUT4	2030324	3412	0.054	-0.0236	No
14	GCS1	1740603	3820	0.035	-0.0433	No
15	MAN1C1	730133 870398 2340044	3862	0.033	-0.0433	No
16	GAL3ST1	5080746	3878	0.033	-0.0420	No
17	DPM1	1240050 4810019 6380398	3907	0.032	-0.0415	No
18	ALG2	3990091	3916	0.032	-0.0398	No
19	MGAT4A	5690471	4226	0.023	-0.0550	No
20	NGLY1	1570037	4653	0.016	-0.0770	No
21	NCSTN	940601 6400594	4664	0.015	-0.0765	No
22	RPN1	1240113	4720	0.015	-0.0785	No
23	B3GNT5	4780528	4754	0.014	-0.0794	No
24	MGEA5	6100014	4786	0.014	-0.0802	No
25	B3GALNT1	3390746 60131	4938	0.012	-0.0875	No
26	ST8SIA3	6940427	5430	0.009	-0.1134	No
27	GALNT7	3990280	7222	0.002	-0.2099	No
28	TSPAN8	1740538	7624	0.001	-0.2315	No
29	ACHE	5290750	7773	0.000	-0.2395	No
30	FUT1	1500068	7862	0.000	-0.2442	No
31	ADAMTS9	2760079	8292	-0.001	-0.2673	No
32	B3GALT2	430136	9061	-0.003	-0.3085	No
33	APOA4	4120451	9443	-0.004	-0.3288	No
34	ALK	730008	9546	-0.004	-0.3341	No
35	ALG6	4060131	9658	-0.004	-0.3398	No
36	TUSC3	1690411	10139	-0.006	-0.3653	No
37	AGA	6350292	10430	-0.007	-0.3805	No
38	FUT9	3940121	10907	-0.009	-0.4056	No
39	COG7	360133	11592	-0.012	-0.4417	No
40	TM4SF4	540600	11685	-0.012	-0.4459	No
41	LRP2	1400204 3290706	12076	-0.014	-0.4660	No
42	DPM2	3610253	12092	-0.015	-0.4658	No
43	FUT10	6510603	12102	-0.015	-0.4654	No
44	B3GALT5	4060047	12233	-0.016	-0.4714	No
45	LIPC	2690497	12235	-0.016	-0.4704	No
46	APH1A	4060273 4670465 6450711	12343	-0.017	-0.4751	No
47	GCNT3	6290239	12348	-0.017	-0.4742	No
48	GALNT1	4070487 6130100 6250132 6900048	12527	-0.018	-0.4826	No
49	FUT2	3990047	13519	-0.030	-0.5341	No
50	ST8SIA2	2680082	13642	-0.032	-0.5386	No
51	TSPAN7	870133	13668	-0.033	-0.5378	No
52	FUT7	2900736	13669	-0.033	-0.5356	No
53	IL17A	4280369	14028	-0.040	-0.5524	No
54	KEL	6940440	14080	-0.041	-0.5524	No
55	ST8SIA4	2680605 3060215	14376	-0.049	-0.5652	No
56	GCNT1	940129 1780215 2370253	14394	-0.049	-0.5629	No
57	LDLR	5670386	15131	-0.079	-0.5974	No
58	CLN3	780368	15549	-0.108	-0.6129	No
59	POFUT1	1570458	15773	-0.129	-0.6165	Yes
60	GALNT6	3710377	15819	-0.134	-0.6102	Yes
61	MAN2B1	4210446	15918	-0.145	-0.6060	Yes
62	TM4SF5	3120280	16124	-0.174	-0.6057	Yes
63	ALG1	2570112	16132	-0.175	-0.5947	Yes
64	COG2	5900129	16282	-0.196	-0.5900	Yes
65	DOLPP1	4780619 6400053	16299	-0.198	-0.5779	Yes
66	MGAT4B	130053 6840100	16345	-0.206	-0.5669	Yes
67	B3GALT4	2340239	16669	-0.251	-0.5680	Yes
68	ALG12	1400692	17014	-0.311	-0.5663	Yes
69	SDF2	2690601	17318	-0.375	-0.5582	Yes
70	BACE1	2650438	17364	-0.386	-0.5354	Yes
71	DPM3	50039	17494	-0.423	-0.5148	Yes
72	CD37	770273	17648	-0.474	-0.4922	Yes
73	MPDU1	1850091	17796	-0.532	-0.4654	Yes
74	PSEN2	130382	17846	-0.558	-0.4317	Yes
75	GYPC	2320102	18345	-1.043	-0.3905	Yes
76	ALG5	3060692 4780093 6590097	18451	-1.323	-0.3100	Yes
77	TNIP1	2510279 5900041 6510435	18560	-2.265	-0.1682	Yes
78	PSEN1	130403 2030647 6100603	18581	-2.626	0.0019	Yes