Details for gene set SHEPARD_NEG_REG_OF_CELL

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	SHEPARD_NEG_REG_OF_CELL_PROLIFERATION
Enrichment Score (ES)	0.7137976
Normalized Enrichment Score (NES)	1.7376375
Nominal p-value	0.0
FDR q-value	0.029574601
FWER p-Value	0.074

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	IGFBP7	520411 3060110 5290152	9	3.084	0.0981	Yes
2	BTG1	4200735 6040131 6200133	14	2.662	0.1830	Yes
3	CDKN1C	6520577	20	2.517	0.2632	Yes
4	CDKN2A	4670215 4760047	22	2.420	0.3405	Yes
5	MDM2	3450053 5080138	41	2.078	0.4060	Yes
6	ING1	5690010 6520056	81	1.566	0.4540	Yes
7	CD164	3830594	112	1.406	0.4973	Yes
8	GPNMB	1780138 2340176 3390403 4560156	113	1.401	0.5421	Yes
9	CDC7	4060546 4850041	133	1.359	0.5845	Yes
10	PPM1D	1690193	270	1.000	0.6092	Yes
11	APRIN	2810050	277	0.987	0.6404	Yes
12	PRKRIR	2370402	389	0.856	0.6618	Yes
13	CDC6	4570296 5360600	400	0.848	0.6883	Yes
14	TOB1	4150138	675	0.646	0.6942	Yes
15	SESN1	2120021	691	0.638	0.7138	Yes
16	CUL1	1990632	1308	0.386	0.6929	No
17	EMP3	1500722 1570039	1378	0.365	0.7008	No
18	TOB2	1240465	1933	0.225	0.6781	No
19	CDKN1A	4050088 6400706	2242	0.164	0.6667	No
20	NCK2	2510010	2539	0.124	0.6547	No
21	PCAF	2230161 2570369 6550451	2700	0.107	0.6495	No
22	CUL4A	1170088 2320008 2470278	2752	0.101	0.6500	No
23	CTBP2	430309 3710079	3199	0.067	0.6280	No
24	IL1B	2640364	3322	0.059	0.6233	No
25	PAWR	5130546 6330706	3379	0.056	0.6221	No
26	AIF1	130332 5220017	3415	0.053	0.6219	No
27	BAP1	3830131	3444	0.052	0.6221	No
28	KLF4	1850022 3830239 5570750	3493	0.050	0.6211	No
29	RARRES1	770139 5860390	3801	0.035	0.6056	No
30	CHEK1	50167 1940300	4014	0.028	0.5951	No
31	CDKN2B	6020040	4293	0.021	0.5807	No
32	CD33	3990735	4694	0.015	0.5596	No
33	BTG2	2350411	4794	0.014	0.5547	No
34	IL6	380133	4975	0.012	0.5454	No
35	UMOD	1980603	5175	0.010	0.5350	No
36	COL18A1	610301 4570338	5714	0.007	0.5061	No
37	SSTR1	2630471	6414	0.004	0.4685	No
38	CUL5	450142	6869	0.003	0.4441	No
39	BTG3	7050079	7195	0.002	0.4266	No
40	ADAMTS8	3990497	7443	0.001	0.4134	No
41	ADAMTS1	3140286 5860463	7806	0.000	0.3938	No
42	FRK	5130333	8206	-0.001	0.3723	No
43	SST	6590142	8260	-0.001	0.3695	No
44	GAS1	2120504	8332	-0.001	0.3657	No
45	OPRM1	5360279	8473	-0.001	0.3581	No
46	NF2	4150735 6450139	8710	-0.002	0.3455	No
47	NF1	6980433	9083	-0.003	0.3255	No
48	FABP6	7000278	9173	-0.003	0.3208	No
49	CNOT8	4590129	9323	-0.003	0.3128	No
50	FABP7	4590142	9433	-0.004	0.3071	No
51	SSTR3	5420064	9714	-0.005	0.2921	No
52	PLG	3360270 3840100	9939	-0.005	0.2802	No
53	CGREF1	4540546	10300	-0.006	0.2609	No
54	IL1A	3610056	10395	-0.007	0.2561	No
55	MLLT7	4480707	10618	-0.008	0.2443	No
56	FABP3	6860452	10761	-0.008	0.2369	No
57	POU1F1	450148	10807	-0.008	0.2348	No
58	TGFB1I1	2060288 6550450	11151	-0.009	0.2166	No
59	CDKN3	110520	11537	-0.011	0.1961	No
60	TM4SF4	540600	11685	-0.012	0.1886	No
61	S100A11	2260064	12006	-0.014	0.1718	No
62	BAI1	6350053	12041	-0.014	0.1704	No
63	ATP8A2	1580086 3940025	12207	-0.015	0.1620	No
64	COL4A3	5910075	12595	-0.019	0.1417	No
65	GNRH1	430167	12670	-0.019	0.1383	No
66	MDM4	4070504 4780008	13496	-0.030	0.0947	No
67	CTBP1	3780315	13517	-0.030	0.0946	No
68	NDN	5670075	13977	-0.039	0.0710	No
69	CUL2	4200278	14066	-0.041	0.0676	No
70	ETS1	5270278 6450717 6620465	14113	-0.042	0.0664	No
71	PTHLH	5290739	14267	-0.046	0.0597	No
72	SSTR4	6100398	14624	-0.056	0.0422	No
73	BCL2	730132 1570736 2470138 3800044 4810037 5690068 5860504 6650164	14977	-0.070	0.0255	No
74	ADRA1A	1230446 2260390	15057	-0.075	0.0236	No
75	CDKN1B	3800025 6450044	15072	-0.076	0.0253	No
76	DLG5	450215	15235	-0.084	0.0192	No
77	MXI1	5050064 5130484	15279	-0.087	0.0197	No
78	HGS	5570722	15311	-0.089	0.0209	No
79	TNFRSF9	2510400 6650484	15523	-0.105	0.0128	No
80	RBBP4	6650528	15602	-0.113	0.0122	No
81	PRKRA	2510600	15688	-0.121	0.0115	No
82	ZRANB1	510373 4540278	15755	-0.128	0.0120	No
83	IGFBP6	1580181	15840	-0.136	0.0118	No
84	MNT	4920575	15919	-0.145	0.0123	No
85	TNFRSF8	870136 4810446	16652	-0.248	-0.0193	No
86	MXD4	4810113	16709	-0.257	-0.0141	No
87	PMP22	4010239 6550072	16723	-0.259	-0.0065	No
88	CXCL1	2690537	16950	-0.300	-0.0092	No
89	CDKN2D	6040035	17507	-0.427	-0.0255	No
90	CDKN2C	5050750 5130148	17523	-0.433	-0.0125	No
91	WARS	2570717 3290139	17685	-0.486	-0.0057	No
92	QSCN6	3120441	17837	-0.554	0.0039	No
93	SSTR2	4590687	17892	-0.581	0.0195	No
94	CDK10	60164 1190717 3130128 3990044	17944	-0.610	0.0363	No