Details for gene set SANSOM_APC_LOSS5

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	SANSOM_APC_LOSS5_UP
Enrichment Score (ES)	0.7351019
Normalized Enrichment Score (NES)	1.7732646
Nominal p-value	0.0
FDR q-value	0.03170403
FWER p-Value	0.027

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GNL3	4050338 4810500	55	1.783	0.0831	Yes
2	EIF4G2	3800575 6860184	94	1.497	0.1532	Yes
3	DDX21	6100446	309	0.946	0.1873	Yes
4	2810037C14RIK	5290575	332	0.923	0.2307	Yes
5	PRKRIR	2370402	389	0.856	0.2690	Yes
6	ETF1	6770075	439	0.816	0.3057	Yes
7	NOL5	580731	524	0.744	0.3370	Yes
8	NCL	2360463 4540279	556	0.718	0.3700	Yes
9	CDCA7	3060097	577	0.705	0.4029	Yes
10	HK2	2640722	588	0.700	0.4362	Yes
11	EIF1	5080100	598	0.690	0.4690	Yes
12	ETS2	360451	605	0.686	0.5018	Yes
13	TIAM1	5420288	659	0.655	0.5305	Yes
14	FTSJ3	3140100	738	0.613	0.5559	Yes
15	HNRPAB	540504	740	0.612	0.5854	Yes
16	SOX4	2260091	850	0.562	0.6067	Yes
17	NSUN2	2120193	931	0.529	0.6278	Yes
18	4930573I19RIK	5270402	1002	0.502	0.6483	Yes
19	1190002H23RIK	4480128	1090	0.463	0.6659	Yes
20	FEM1B	1230110	1272	0.400	0.6755	Yes
21	COPS2	3060142	1346	0.374	0.6896	Yes
22	PES1	2470427	1410	0.357	0.7034	Yes
23	UTP14A	6590048	1460	0.345	0.7174	Yes
24	CIRH1A	2340372	1504	0.334	0.7312	Yes
25	GNL2	6620022	1773	0.263	0.7295	Yes
26	PRIM2A	7000692	1931	0.226	0.7319	Yes
27	SRR	1190465 3800494	2307	0.155	0.7192	Yes
28	ZFP90	580121	2331	0.151	0.7252	Yes
29	RNF4	580286 1400152	2345	0.149	0.7317	Yes
30	MAP4K4	2360059	2409	0.141	0.7351	Yes
31	IFIT2	4810735	2875	0.091	0.7144	No
32	CD24	1780091	3102	0.073	0.7057	No
33	FUSIP1	520082 5390114	3280	0.061	0.6991	No
34	TXNL4A	4120286 6510242	3360	0.057	0.6976	No
35	MYC	380541 4670170	3486	0.050	0.6933	No
36	ZRF1	6020181 6510484	3589	0.045	0.6899	No
37	RIN2	2450184	3815	0.035	0.6795	No
38	ORC2L	1990470 6510019	3821	0.035	0.6809	No
39	OLFR91	6290020	4069	0.026	0.6688	No
40	FOXA2	540338 5860441	4599	0.016	0.6411	No
41	LAMC2	450692 2680041 4200059 4670148	4671	0.015	0.6380	No
42	NUP54	940546 2360156 4060278	5079	0.011	0.6166	No
43	SEMA3C	7000020	5242	0.010	0.6083	No
44	EPHB3	6650341	5446	0.009	0.5977	No
45	RNF149	5270494	5449	0.009	0.5980	No
46	BTC	3190133	5506	0.008	0.5954	No
47	KIF5A	510435	5621	0.008	0.5896	No
48	SYNCRIP	1690195 3140113 4670279	6127	0.005	0.5627	No
49	PKP1	1500433	6645	0.004	0.5349	No
50	CITED1	2350670	6691	0.003	0.5327	No
51	PTBP2	1240398	6732	0.003	0.5307	No
52	ZFP97	520324	7157	0.002	0.5079	No
53	REPS1	2320603 2510333	7253	0.002	0.5029	No
54	9630050M13RIK	2370086	7322	0.002	0.4993	No
55	PLA2G12A	1740463 4010066 4050348	7795	0.000	0.4738	No
56	ADAM8	450347 5670609	8737	-0.002	0.4231	No
57	FAM60A	3940092	8749	-0.002	0.4226	No
58	TSPAN12	4120010	8814	-0.002	0.4193	No
59	1110014J01RIK	1980332	8949	-0.002	0.4122	No
60	TGFBR1	1400148 4280020 6550711	9263	-0.003	0.3955	No
61	HELLS	4560086 4810025	9667	-0.004	0.3739	No
62	MYO1B	770372	10156	-0.006	0.3479	No
63	ANP32B	940095 2450494 4200368	10200	-0.006	0.3459	No
64	FGFR4	2650072	10987	-0.009	0.3039	No
65	2300002G24RIK	2320040	11091	-0.009	0.2988	No
66	MMP7	1780497	11887	-0.013	0.2565	No
67	KIF20A	2650050	12283	-0.016	0.2360	No
68	CEBPZ	2970053 2680068	12427	-0.017	0.2291	No
69	PLA2G2A	3190458	12494	-0.018	0.2264	No
70	HDC	4150463	13161	-0.025	0.1917	No
71	ZZZ3	780133 2320239 2640452 5080706 6550341	13170	-0.025	0.1924	No
72	KCND2	1170128 2100112	13905	-0.037	0.1546	No
73	CD44	3990072 4850671 5860411 6860148 7050551	14177	-0.044	0.1421	No
74	TNFRSF19	3870731 6940730	14277	-0.046	0.1390	No
75	MDFI	6200041	15168	-0.081	0.0949	No
76	DDIT4	2570408	15400	-0.095	0.0870	No
77	KCNQ1	1580050 6860441	15860	-0.139	0.0690	No
78	ZBTB17	6220082	16401	-0.215	0.0502	No
79	CDK9	630707	16522	-0.231	0.0549	No
80	SMYD5	6220025	16910	-0.293	0.0481	No
81	SLC27A1	6110093	17434	-0.406	0.0395	No
82	GRWD1	6350528	17731	-0.502	0.0477	No