Details for gene set PASSERINI

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	PASSERINI_GROWTH
Enrichment Score (ES)	-0.74797153
Normalized Enrichment Score (NES)	-1.5196301
Nominal p-value	0.019379845
FDR q-value	0.50281304
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KIT	7040095	2289	0.158	-0.0820	No
2	IFRD1	4590215	3039	0.078	-0.1021	No
3	EGF	5220154	3128	0.071	-0.0884	No
4	PDGFRL	870168 4590128	3602	0.044	-0.1024	No
5	PDGFRA	2940332	3792	0.036	-0.1032	No
6	LTBP1	780035 2100746 2760402 3780551 6550184 6860193	3814	0.035	-0.0953	No
7	IL6	380133	4975	0.012	-0.1546	No
8	IGF1R	3360494	5733	0.007	-0.1935	No
9	GDF5	510440	5979	0.006	-0.2051	No
10	TGFB2	4920292	6205	0.005	-0.2159	No
11	EDN2	6760647	6916	0.003	-0.2534	No
12	VEGFC	5910494	6925	0.003	-0.2531	No
13	FGF7	5390484	6982	0.003	-0.2555	No
14	TGFA	1570332	7390	0.001	-0.2770	No
15	POLR2B	3780138	7525	0.001	-0.2840	No
16	NOV	2850746	8554	-0.002	-0.3389	No
17	EDN1	1770047	8742	-0.002	-0.3484	No
18	IGFBP1	5720435	8889	-0.002	-0.3557	No
19	LTBP2	4850039	9022	-0.003	-0.3621	No
20	CTGF	4540577	9135	-0.003	-0.3673	No
21	FLT3	2640487	9172	-0.003	-0.3685	No
22	KDR	3610286	9234	-0.003	-0.3709	No
23	FGF1	4780435 5670601	9756	-0.005	-0.3977	No
24	BDNF	2940128 3520368	9954	-0.005	-0.4069	No
25	NR4A1	6290161	10252	-0.006	-0.4213	No
26	FLT1	3830167 4920438	13314	-0.027	-0.5791	No
27	PDGFB	3060440 6370008	13639	-0.032	-0.5881	No
28	FGF2	3450433	14337	-0.048	-0.6132	No
29	PGF	4810593	15196	-0.082	-0.6379	No
30	PDGFRB	6450279	17242	-0.356	-0.6555	Yes
31	IGF2	6510020	18425	-1.234	-0.3988	Yes
32	TGFBR2	1780711 1980537 6550398	18499	-1.576	0.0063	Yes