Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	-0.62652194
Normalized Enrichment Score (NES)	-1.5285501
Nominal p-value	0.001934236
FDR q-value	0.4683475
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SPINK2	3990093	489	0.766	0.0220	No
2	MRPL46	360736	1777	0.263	-0.0309	No
3	IL6R	520706 3800215	2135	0.185	-0.0385	No
4	F10	3830450	2239	0.164	-0.0337	No
5	ALAS1	6400440	2329	0.151	-0.0290	No
6	SGPL1	4480059	2508	0.127	-0.0306	No
7	AMFR	2810041	2595	0.119	-0.0277	No
8	SEC14L2	2640370	2600	0.119	-0.0204	No
9	ITPR2	5360128	3200	0.067	-0.0486	No
10	SRD5A1	5910347	3433	0.053	-0.0578	No
11	SELENBP1	3850575	3695	0.040	-0.0694	No
12	EHHADH	6200315	4004	0.029	-0.0842	No
13	HYAL1	3850341	4421	0.019	-0.1055	No
14	SLC6A12	3170685	4442	0.018	-0.1054	No
15	ZP3	4060767	4464	0.018	-0.1054	No
16	CES3	5050167 3290458	4506	0.018	-0.1065	No
17	RHBG	2810736	4642	0.016	-0.1128	No
18	SLC27A5	2850717	4699	0.015	-0.1149	No
19	MYRIP	1580471	5223	0.010	-0.1426	No
20	FMO3	2480369	5230	0.010	-0.1423	No
21	BAAT	730739	5493	0.008	-0.1559	No
22	PCYT2	2630092 4590278	5531	0.008	-0.1574	No
23	LPIN1	1770358 3120059	5587	0.008	-0.1599	No
24	PKLR	1170400 2470114	5677	0.007	-0.1642	No
25	HGD	460390	5864	0.007	-0.1738	No
26	TTBK1	60605 1850722	6070	0.006	-0.1846	No
27	AQP9	2650047	6139	0.005	-0.1879	No
28	HAO1	7050093	6389	0.004	-0.2011	No
29	CES1	1400494	6471	0.004	-0.2052	No
30	UGT1A6	4610368 6900086 4540092 2630075	6827	0.003	-0.2242	No
31	RGN	6200095	7045	0.002	-0.2358	No
32	ANXA9	1190195	7742	0.000	-0.2733	No
33	CES2	5340609	8202	-0.001	-0.2981	No
34	PIPOX	70750	8361	-0.001	-0.3066	No
35	ITIH1	670044	8436	-0.001	-0.3105	No
36	APOA5	6130471	8445	-0.001	-0.3109	No
37	CDO1	2480279	8579	-0.002	-0.3179	No
38	HPD	3120519	8741	-0.002	-0.3265	No
39	WNT11	1230278	8794	-0.002	-0.3292	No
40	MPDZ	130026 1990064 4050577	8830	-0.002	-0.3309	No
41	ABCG5	2810670	9004	-0.003	-0.3401	No
42	NF1	6980433	9083	-0.003	-0.3442	No
43	MTSS1	780435 2370114	9195	-0.003	-0.3500	No
44	AMACR	780215	9481	-0.004	-0.3651	No
45	AOX1	110082 6290450	9524	-0.004	-0.3671	No
46	APCS	2060500	9617	-0.004	-0.3718	No
47	GJB1	1240441	9765	-0.005	-0.3795	No
48	DPYS	3130670	9787	-0.005	-0.3803	No
49	KLK3	1500278	9801	-0.005	-0.3807	No
50	DIO1	4570279 5290112 5420148	9891	-0.005	-0.3852	No
51	SULT2A1	2650286	9912	-0.005	-0.3859	No
52	SERPINC1	1780717	10176	-0.006	-0.3998	No
53	F13B	6220278	10534	-0.007	-0.4186	No
54	TTPA	630576	10567	-0.007	-0.4199	No
55	PAH	3800309	10568	-0.007	-0.4194	No
56	MUCDHL	5720056	10669	-0.008	-0.4243	No
57	ASGR1	1850088	10712	-0.008	-0.4261	No
58	CPN2	6590291	11333	-0.010	-0.4589	No
59	APOC3	2030168	11381	-0.011	-0.4608	No
60	MST1	1400403	11580	-0.011	-0.4708	No
61	OTC	1740494	11597	-0.012	-0.4709	No
62	CABIN1	6900446	11721	-0.012	-0.4768	No
63	CPB2	4150167 6100333 6590735	12278	-0.016	-0.5058	No
64	CUTL2	2940692 6220687	12382	-0.017	-0.5103	No
65	AR	6380167	12867	-0.021	-0.5351	No
66	PCK1	7000358	12894	-0.022	-0.5351	No
67	ABCA6	130538 1050706	12940	-0.022	-0.5362	No
68	INSR	1190504	13090	-0.024	-0.5427	No
69	PRDX6	4920397 6380601	13223	-0.025	-0.5482	No
70	GLYAT	6200239	13227	-0.025	-0.5468	No
71	MSRA	4570411	13510	-0.030	-0.5601	No
72	ABCC2	380202 5390300	13558	-0.031	-0.5607	No
73	VPREB1	3520280	13596	-0.032	-0.5607	No
74	F12	1090215 3520736	13795	-0.035	-0.5692	No
75	SALL1	5420020 7050195	13824	-0.036	-0.5685	No
76	MASP2	360110	13876	-0.037	-0.5689	No
77	SERPIND1	6110059	13939	-0.038	-0.5699	No
78	SLC2A2	5130537 5720722 6770079	14041	-0.040	-0.5728	No
79	C1QTNF4	60619	14109	-0.042	-0.5738	No
80	G6PC	430093	14155	-0.043	-0.5735	No
81	RDH5	2970736 3940632 5340730 6370093 4610059	14249	-0.046	-0.5756	No
82	ABCG8	4780605	14371	-0.049	-0.5791	No
83	SLC38A3	5340142	14770	-0.061	-0.5967	No
84	NDUFS2	4850020 6200402	14882	-0.066	-0.5986	No
85	AMT	3180450	15103	-0.077	-0.6056	No
86	PPAP2A	1170397 3440288 3930270	15357	-0.092	-0.6134	No
87	CRAT	540020 2060364 3520148	15478	-0.101	-0.6135	No
88	INSIG1	1500332 3450458 4540301	15720	-0.125	-0.6186	Yes
89	ACOX2	450017	15787	-0.131	-0.6139	Yes
90	EPHX1	1740136	15789	-0.131	-0.6057	Yes
91	IVD	2510673	16009	-0.160	-0.6074	Yes
92	HAGH	540358	16313	-0.200	-0.6111	Yes
93	ENPP5	1780338	16420	-0.218	-0.6031	Yes
94	ABHD6	630717	16693	-0.255	-0.6017	Yes
95	SLC35D1	1740520	16983	-0.306	-0.5980	Yes
96	SERPING1	5550440	17069	-0.321	-0.5822	Yes
97	SLC25A10	1400609	17099	-0.326	-0.5632	Yes
98	SERPINF1	7040367	17119	-0.329	-0.5434	Yes
99	MAP4K1	4060692	17206	-0.350	-0.5260	Yes
100	STARD10	1400619 4570170	17245	-0.357	-0.5054	Yes
101	DCXR	4730551	17302	-0.371	-0.4850	Yes
102	PCCB	50670	17316	-0.374	-0.4620	Yes
103	EGLN2	540086	17385	-0.391	-0.4410	Yes
104	ECHS1	2970184	17522	-0.433	-0.4210	Yes
105	ALDH4A1	2450450	17651	-0.474	-0.3979	Yes
106	MVK	1450717	17673	-0.481	-0.3686	Yes
107	CPT2	3940504 6180075	17823	-0.548	-0.3420	Yes
108	KHK	1090204 3870204	18007	-0.646	-0.3110	Yes
109	C2	5390465	18239	-0.888	-0.2674	Yes
110	ACADS	110746	18349	-1.049	-0.2070	Yes
111	PINK1	380044 580577	18350	-1.049	-0.1407	Yes
112	NDRG2	450403	18360	-1.078	-0.0730	Yes
113	CRYL1	1340427	18459	-1.372	0.0085	Yes