Details for gene set ET743_SARCOMA

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	ET743_SARCOMA_DN
Enrichment Score (ES)	0.6203419
Normalized Enrichment Score (NES)	1.6485517
Nominal p-value	0.0
FDR q-value	0.074975714
FWER p-Value	0.559

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BTG1	4200735 6040131 6200133	14	2.662	0.0487	Yes
2	SIRPA	130465 5700332	54	1.848	0.0810	Yes
3	LBR	4540671	95	1.478	0.1063	Yes
4	HSPH1	1690017	121	1.386	0.1307	Yes
5	CDC5L	3130446 3390025 6400204	125	1.376	0.1561	Yes
6	PRKACB	4210170	131	1.364	0.1812	Yes
7	HDAC2	4050433	153	1.273	0.2037	Yes
8	RAP1B	3710138	192	1.148	0.2230	Yes
9	TBK1	5690338	223	1.069	0.2412	Yes
10	DCK	6900411	231	1.060	0.2606	Yes
11	EP400	3940722	285	0.983	0.2760	Yes
12	GTF2H2	5130358	305	0.954	0.2927	Yes
13	DDX21	6100446	309	0.946	0.3101	Yes
14	RPP14	7040014	345	0.911	0.3251	Yes
15	SLC4A1AP	3190576	354	0.901	0.3414	Yes
16	RABGAP1	5050397	368	0.884	0.3572	Yes
17	RABGGTB	3120037	428	0.823	0.3693	Yes
18	SRPK2	6380341	440	0.812	0.3838	Yes
19	TMPO	4050494	450	0.804	0.3982	Yes
20	PSMA4	4560427	485	0.771	0.4107	Yes
21	CCT4	6380161	506	0.758	0.4237	Yes
22	DDX20	3290348	552	0.721	0.4347	Yes
23	TOP2A	360717	627	0.675	0.4432	Yes
24	UBE2D2	4590671 6510446	656	0.656	0.4539	Yes
25	OSBPL9	2570373	683	0.641	0.4644	Yes
26	FAF1	2450717 2510121 4730156	706	0.630	0.4749	Yes
27	POLD3	6400278	722	0.624	0.4857	Yes
28	PSMD14	5690593	743	0.611	0.4960	Yes
29	CCNH	3190347	764	0.603	0.5061	Yes
30	RAB1A	2370671	791	0.589	0.5156	Yes
31	PPP2R5E	70671 2120056	801	0.583	0.5260	Yes
32	PCNA	940754	833	0.569	0.5349	Yes
33	SLC25A17	2100369	941	0.525	0.5388	Yes
34	AOF2	2060300	985	0.506	0.5459	Yes
35	MCTS1	6130133	1100	0.460	0.5482	Yes
36	SFRS3	770315 4230593	1323	0.381	0.5433	Yes
37	MAP3K7	6040068	1368	0.370	0.5478	Yes
38	EIF4B	5390563 5270577	1372	0.369	0.5545	Yes
39	MAPK14	5290731	1417	0.354	0.5587	Yes
40	OGT	2360131 4610333	1440	0.350	0.5640	Yes
41	ZDHHC5	1690711	1557	0.322	0.5636	Yes
42	CRLF3	6620019	1593	0.309	0.5675	Yes
43	FNTA	70059	1609	0.303	0.5723	Yes
44	BCL2L1	1580452 4200152 5420484	1636	0.296	0.5764	Yes
45	UBE2D3	3190452	1699	0.280	0.5782	Yes
46	STAU1	2320494	1736	0.271	0.5813	Yes
47	RBM17	870592	1758	0.267	0.5852	Yes
48	AURKA	780537	1786	0.261	0.5885	Yes
49	SIRT1	1190731	1801	0.257	0.5926	Yes
50	NET1	2900707	1824	0.252	0.5960	Yes
51	USP3	2060332	1862	0.242	0.5985	Yes
52	MAT2A	4070026 4730079 6020280	1915	0.232	0.6000	Yes
53	TXNRD1	6590446	1920	0.230	0.6041	Yes
54	PRIM2A	7000692	1931	0.226	0.6077	Yes
55	PJA2	430537	2020	0.206	0.6068	Yes
56	RIPK1	3190025	2067	0.197	0.6079	Yes
57	MRPL15	360390	2114	0.189	0.6090	Yes
58	SUPV3L1	1170072	2124	0.187	0.6119	Yes
59	TNFSF5IP1	2060095	2148	0.182	0.6141	Yes
60	PSME3	2810537	2159	0.180	0.6169	Yes
61	PPP1CC	6380300 2510647	2165	0.179	0.6199	Yes
62	ELOVL6	5340746	2267	0.161	0.6175	Yes
63	CDK5R1	3870161	2270	0.161	0.6203	Yes
64	XBP1	3840594	2353	0.148	0.6186	No
65	YWHAE	5310435	2426	0.138	0.6173	No
66	GTF2B	6860685	2553	0.122	0.6127	No
67	PSMC6	2810021	2614	0.117	0.6116	No
68	MCM3	5570068	2691	0.107	0.6095	No
69	TCERG1	2350551 4540397 5220746	2854	0.092	0.6024	No
70	CLCN7	2970095	2959	0.083	0.5983	No
71	BIRC2	2940435 4730020	3059	0.076	0.5944	No
72	STK17B	130091	3191	0.067	0.5885	No
73	GABPB2	6130450 7050735	3202	0.067	0.5892	No
74	CCNA2	5290075	3209	0.066	0.5901	No
75	SRRM2	2940746 6350253	3241	0.064	0.5896	No
76	EML4	5700373	3329	0.058	0.5860	No
77	FBXL3	5910142	3383	0.056	0.5841	No
78	MYC	380541 4670170	3486	0.050	0.5795	No
79	WEE1	3390070	3537	0.047	0.5777	No
80	USP12	6130735 6620280	3562	0.046	0.5773	No
81	CYHR1	940609 2810463 3190332 3290692 4280411	3665	0.041	0.5725	No
82	ARFGEF2	5550500	3711	0.039	0.5708	No
83	FNDC3A	2690097 3290044	3726	0.038	0.5707	No
84	LUZP1	940075 4280458 6180070	3912	0.032	0.5613	No
85	MRPS35	2370603 4070551	3933	0.031	0.5608	No
86	PSMB1	2940402	4007	0.028	0.5573	No
87	CDC23	3190593	4029	0.028	0.5567	No
88	PAFAH2	3140451 5720593 6510014	4302	0.021	0.5423	No
89	RCOR1	5360717	4359	0.020	0.5397	No
90	PTPRK	1450433 2640142	4623	0.016	0.5257	No
91	SSFA2	3870133	4809	0.014	0.5159	No
92	FYN	2100468 4760520 4850687	4821	0.014	0.5155	No
93	HSPA1L	4010538	4869	0.013	0.5132	No
94	GGPS1	840128 2320215	5005	0.012	0.5061	No
95	ACSL3	3140195	5118	0.011	0.5002	No
96	RAD23B	2190671	5251	0.010	0.4933	No
97	GOPC	6620400	5384	0.009	0.4863	No
98	CDC42BPA	840671	5675	0.007	0.4706	No
99	GDI2	2370068	5719	0.007	0.4684	No
100	CSNK2A1	1580577	5822	0.007	0.4630	No
101	CDC25C	2570673 4760161 6520707	6018	0.006	0.4526	No
102	CFLAR	2320605 6180440	6130	0.005	0.4466	No
103	RAB6A	3840463 4780731	6674	0.003	0.4172	No
104	VEGFC	5910494	6925	0.003	0.4037	No
105	RAB5A	6520324	7144	0.002	0.3919	No
106	SPRY2	5860184	7170	0.002	0.3906	No
107	MFAP1	6660092	7281	0.002	0.3847	No
108	ATG5	6200433 5360324	7589	0.001	0.3680	No
109	BIRC6	70148	7682	0.001	0.3630	No
110	CRK	1230162 4780128	7696	0.001	0.3623	No
111	EPS15	4200215	7772	0.000	0.3583	No
112	TIAM2	360195	7779	0.000	0.3579	No
113	XRCC5	7100286	7892	0.000	0.3519	No
114	KIF11	5390139	7948	-0.000	0.3489	No
115	MAP3K4	5720041	8321	-0.001	0.3287	No
116	SAMD4A	1170717	8355	-0.001	0.3269	No
117	EPS8	7050204	8774	-0.002	0.3043	No
118	JAG1	3440390	8844	-0.002	0.3006	No
119	CTGF	4540577	9135	-0.003	0.2849	No
120	NCOA6	1780333 6450110	9535	-0.004	0.2633	No
121	MTIF2	2260270	9565	-0.004	0.2618	No
122	ATF1	4570142 5550095	9609	-0.004	0.2596	No
123	SMARCA5	6620050	9652	-0.004	0.2574	No
124	MAPKAPK5	2510601	9819	-0.005	0.2484	No
125	NPAS2	770670	9836	-0.005	0.2477	No
126	TRIM24	7050670	9838	-0.005	0.2477	No
127	FOSL1	430021	10299	-0.006	0.2229	No
128	FZD1	3140215	10519	-0.007	0.2111	No
129	FBXL7	6620711	10641	-0.008	0.2047	No
130	CDH11	1230133 2100180 4610110	10824	-0.008	0.1949	No
131	IPO7	2190746	10898	-0.008	0.1911	No
132	TRIP4	630072	11016	-0.009	0.1850	No
133	CDK7	2640451	11027	-0.009	0.1846	No
134	MRPL1	430626 3130129 5220152	11238	-0.010	0.1734	No
135	PRKD3	5220520 5890519	11241	-0.010	0.1734	No
136	USP8	2640347 3840451 6100672	11359	-0.010	0.1673	No
137	TDG	2900358 2940079	11377	-0.011	0.1666	No
138	CXXC5	840010	11438	-0.011	0.1635	No
139	RBM27	4050603	11536	-0.011	0.1584	No
140	JMJD1C	940575 2120025	11572	-0.011	0.1568	No
141	NMI	520270	11624	-0.012	0.1542	No
142	THRAP3	6180309	11717	-0.012	0.1494	No
143	NBN	730538 2470619 4780594	12040	-0.014	0.1322	No
144	NUFIP1	6350241	12136	-0.015	0.1273	No
145	B4GALT5	1230692	12656	-0.019	0.0995	No
146	OSBP	5390471	12752	-0.020	0.0947	No
147	PLK1	1780369 2640121	12849	-0.021	0.0899	No
148	RCC1	2480358	12888	-0.022	0.0883	No
149	CRSP6	2940358	12942	-0.022	0.0858	No
150	HS3ST3B1	380040	13199	-0.025	0.0724	No
151	PLAG1	1450142 3870139 6520039	13455	-0.029	0.0591	No
152	BUB1	5390270	13478	-0.029	0.0584	No
153	PDGFB	3060440 6370008	13639	-0.032	0.0503	No
154	GTF2H1	2570746 2650148	14039	-0.040	0.0294	No
155	CORO1C	4570397	14045	-0.040	0.0299	No
156	RNF14	50402 1340041 6370687	14225	-0.045	0.0210	No
157	PHF6	3120632 3990041	14281	-0.046	0.0189	No
158	BLZF1	630088	14327	-0.048	0.0173	No
159	HSPE1	3170438	14405	-0.050	0.0141	No
160	EGFR	4920138 6480521	14489	-0.052	0.0105	No
161	JMJD2B	6350372 6400471	14649	-0.057	0.0030	No
162	FADD	2360593 4210692 6520019	14672	-0.058	0.0029	No
163	ANLN	1780113 2470537 6840047	14711	-0.059	0.0019	No
164	SNIP1	5360092	14724	-0.060	0.0024	No
165	UBN1	5900195	14899	-0.067	-0.0058	No
166	ERCC3	6900008	14917	-0.068	-0.0055	No
167	EIF3S10	1190079 3840176	14940	-0.069	-0.0054	No
168	MTMR4	4540524	15000	-0.072	-0.0073	No
169	DLG5	450215	15235	-0.084	-0.0184	No
170	PKN2	940746 2350168	15248	-0.085	-0.0175	No
171	PSMA5	5390537	15296	-0.088	-0.0184	No
172	PSMC2	7040010	15638	-0.116	-0.0348	No
173	TOP1	770471 4060632 6650324	15704	-0.123	-0.0360	No
174	SFRS9	3800047	15791	-0.131	-0.0382	No
175	ADSL	5570484	15830	-0.135	-0.0378	No
176	DNAJA2	2630253 6860358	15886	-0.142	-0.0381	No
177	ARHGEF2	3360577	16222	-0.187	-0.0528	No
178	SON	3120148 5860239 7040403	16252	-0.192	-0.0508	No
179	PANX1	6550632	16460	-0.222	-0.0579	No
180	ZDHHC16	4230390	16679	-0.253	-0.0651	No
181	RBM14	5340731 5690315	16739	-0.262	-0.0634	No
182	BAG2	2900324	16758	-0.266	-0.0594	No
183	ARPC5L	1090148	16959	-0.302	-0.0647	No
184	UBE2C	6130017	16960	-0.302	-0.0591	No
185	LHFPL2	450020	17005	-0.310	-0.0557	No
186	SLC2A1	2100609	17320	-0.375	-0.0658	No
187	BUB3	3170546	17321	-0.375	-0.0588	No
188	ARFGAP1	4780364 5390358	17397	-0.394	-0.0556	No
189	KIAA0859	510497 770722 1340687 6840711	17517	-0.432	-0.0540	No
190	TARDBP	870390 2350093	17715	-0.494	-0.0555	No
191	MID1IP1	2570739	18026	-0.665	-0.0600	No
192	WNT5B	5080162	18253	-0.907	-0.0554	No
193	HIST1H4B	4210524	18353	-1.054	-0.0411	No
194	HIST1H4C	5570528	18472	-1.451	-0.0206	No
195	HSPA8	2120315 1050132 6550746	18484	-1.525	0.0072	No