DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#absentNotch_versus_truncNotch_repos
Phenotypephenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in classabsentNotch
GeneSetET743_SARCOMA_48HRS_DN
Enrichment Score (ES)0.6309007
Normalized Enrichment Score (NES)1.6307546
Nominal p-value0.0
FDR q-value0.075927086
FWER p-Value0.711
Table: GSEA Results Summary



Fig 1: Enrichment plot: ET743_SARCOMA_48HRS_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SIRPA130465 5700332541.8480.0432Yes
2LBR4540671951.4780.0780Yes
3HSPH116900171211.3860.1113Yes
4CDC5L3130446 3390025 64002041251.3760.1455Yes
5PRKACB42101701311.3640.1793Yes
6HDAC240504331531.2730.2100Yes
7RAP1B37101381921.1480.2366Yes
8TBK156903382231.0690.2617Yes
9GTF2H251303583050.9540.2811Yes
10DDX2161004463090.9460.3046Yes
11RPP1470400143450.9110.3255Yes
12SLC4A1AP31905763540.9010.3476Yes
13RABGGTB31200374280.8230.3642Yes
14TMPO40504944500.8040.3831Yes
15PSMA445604274850.7710.4005Yes
16CCT463801615060.7580.4184Yes
17DDX2032903485520.7210.4340Yes
18TOP2A3607176270.6750.4468Yes
19UBE2D24590671 65104466560.6560.4617Yes
20OSBPL925703736830.6410.4763Yes
21POLD364002787220.6240.4898Yes
22PSMD1456905937430.6110.5040Yes
23CCNH31903477640.6030.5180Yes
24RAB1A23706717910.5890.5313Yes
25PCNA9407548330.5690.5433Yes
26SLC25A1721003699410.5250.5506Yes
27MCTS1613013311000.4600.5536Yes
28MAP3K7604006813680.3700.5484Yes
29MAPK14529073114170.3540.5546Yes
30OGT2360131 461033314400.3500.5622Yes
31ZDHHC5169071115570.3220.5639Yes
32CRLF3662001915930.3090.5697Yes
33FNTA7005916090.3030.5765Yes
34BCL2L11580452 4200152 542048416360.2960.5825Yes
35UBE2D3319045216990.2800.5861Yes
36RBM1787059217580.2670.5897Yes
37SIRT1119073118010.2570.5938Yes
38USP3206033218620.2420.5966Yes
39MAT2A4070026 4730079 602028019150.2320.5996Yes
40TXNRD1659044619200.2300.6051Yes
41PRIM2A700069219310.2260.6102Yes
42PJA243053720200.2060.6106Yes
43RIPK1319002520670.1970.6130Yes
44MRPL1536039021140.1890.6153Yes
45SUPV3L1117007221240.1870.6194Yes
46TNFSF5IP1206009521480.1820.6227Yes
47PSME3281053721590.1800.6267Yes
48PPP1CC6380300 251064721650.1790.6309Yes
49ELOVL6534074622670.1610.6295No
50XBP1384059423530.1480.6286No
51GTF2B686068525530.1220.6208No
52PSMC6281002126140.1170.6205No
53MCM3557006826910.1070.6191No
54TCERG12350551 4540397 522074628540.0920.6126No
55CLCN7297009529590.0830.6091No
56BIRC22940435 473002030590.0760.6056No
57STK17B13009131910.0670.6002No
58GABPB26130450 705073532020.0670.6013No
59CCNA2529007532090.0660.6026No
60EML4570037333290.0580.5977No
61FBXL3591014233830.0560.5962No
62USP126130735 662028035620.0460.5877No
63CYHR1940609 2810463 3190332 3290692 428041136650.0410.5832No
64FNDC3A2690097 329004437260.0380.5809No
65PSMB1294040240070.0280.5665No
66CDC23319059340290.0280.5660No
67PAFAH23140451 5720593 651001443020.0210.5518No
68RCOR1536071743590.0200.5493No
69SSFA2387013348090.0140.5253No
70HSPA1L401053848690.0130.5225No
71GOPC662040053840.0090.4949No
72CDC42BPA84067156750.0070.4794No
73CSNK2A1158057758220.0070.4716No
74CFLAR2320605 618044061300.0050.4551No
75VEGFC591049469250.0030.4122No
76RAB5A652032471440.0020.4005No
77MFAP1666009272810.0020.3932No
78ATG56200433 536032475890.0010.3766No
79BIRC67014876820.0010.3716No
80TIAM236019577790.0000.3664No
81KIF1153901397948-0.0000.3573No
82EPS870502048774-0.0020.3127No
83CTGF45405779135-0.0030.2933No
84NCOA61780333 64501109535-0.0040.2718No
85MTIF222602709565-0.0040.2704No
86ATF14570142 55500959609-0.0040.2681No
87SMARCA566200509652-0.0040.2660No
88MAPKAPK525106019819-0.0050.2571No
89FOSL143002110299-0.0060.2313No
90FZD1314021510519-0.0070.2197No
91FBXL7662071110641-0.0080.2133No
92CDH111230133 2100180 461011010824-0.0080.2037No
93IPO7219074610898-0.0080.1999No
94TRIP463007211016-0.0090.1938No
95CDK7264045111027-0.0090.1935No
96MRPL1430626 3130129 522015211238-0.0100.1824No
97TDG2900358 294007911377-0.0110.1752No
98CXXC584001011438-0.0110.1722No
99RBM27405060311536-0.0110.1672No
100JMJD1C940575 212002511572-0.0110.1656No
101NMI52027011624-0.0120.1631No
102THRAP3618030911717-0.0120.1585No
103NBN730538 2470619 478059412040-0.0140.1414No
104NUFIP1635024112136-0.0150.1366No
105B4GALT5123069212656-0.0190.1090No
106PLK11780369 264012112849-0.0210.0992No
107CRSP6294035812942-0.0220.0947No
108HS3ST3B138004013199-0.0250.0815No
109PLAG11450142 3870139 652003913455-0.0290.0684No
110BUB1539027013478-0.0290.0680No
111PDGFB3060440 637000813639-0.0320.0601No
112GTF2H12570746 265014814039-0.0400.0395No
113RNF1450402 1340041 637068714225-0.0450.0306No
114BLZF163008814327-0.0480.0263No
115HSPE1317043814405-0.0500.0234No
116SNIP1536009214724-0.0600.0077No
117UBN1590019514899-0.067-0.0001No
118ERCC3690000814917-0.0680.0007No
119EIF3S101190079 384017614940-0.0690.0012No
120MTMR4454052415000-0.072-0.0002No
121DLG545021515235-0.084-0.0107No
122PSMA5539053715296-0.088-0.0118No
123PSMC2704001015638-0.116-0.0273No
124TOP1770471 4060632 665032415704-0.123-0.0278No
125SFRS9380004715791-0.131-0.0291No
126ADSL557048415830-0.135-0.0278No
127DNAJA22630253 686035815886-0.142-0.0273No
128SON3120148 5860239 704040316252-0.192-0.0422No
129PANX1655063216460-0.222-0.0479No
130ZDHHC16423039016679-0.253-0.0534No
131RBM145340731 569031516739-0.262-0.0500No
132BAG2290032416758-0.266-0.0443No
133UBE2C613001716960-0.302-0.0477No
134LHFPL245002017005-0.310-0.0423No
135SLC2A1210060917320-0.375-0.0499No
136BUB3317054617321-0.375-0.0406No
137ARFGAP14780364 539035817397-0.394-0.0348No
138KIAA0859510497 770722 1340687 684071117517-0.432-0.0305No
139TARDBP870390 235009317715-0.494-0.0288No
140MID1IP1257073918026-0.665-0.0289No
141WNT5B508016218253-0.907-0.0185No
142HSPA82120315 1050132 655074618484-1.5250.0071No
Table: GSEA details [plain text format]



Fig 2: ET743_SARCOMA_48HRS_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ET743_SARCOMA_48HRS_DN: Random ES distribution   
Gene set null distribution of ES for ET743_SARCOMA_48HRS_DN