Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$USF_C
Enrichment Score (ES)	0.60390174
Normalized Enrichment Score (NES)	1.4621062
Nominal p-value	0.0061255745
FDR q-value	0.4668909
FWER p-Value	0.982

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PABPC1	2650180 2690253 6020632 1990270	3	6.314	0.0830	Yes
2	TIMM10	610070 1450019	12	4.552	0.1426	Yes
3	PABPC4	1990170 6760270 5390138	20	4.232	0.1980	Yes
4	HMOX1	1740687	30	3.784	0.2473	Yes
5	AKAP12	1450739	186	2.035	0.2657	Yes
6	SH3KBP1	670102 2850458 7000309	219	1.839	0.2882	Yes
7	PFDN2	4230156	382	1.369	0.2975	Yes
8	FBL	5130020	398	1.351	0.3145	Yes
9	LYAR	7000402	441	1.275	0.3290	Yes
10	IPO4	5050619	451	1.250	0.3450	Yes
11	PPAT	1980019	515	1.138	0.3566	Yes
12	NUDC	4780025	524	1.127	0.3710	Yes
13	NR1D1	2360471 770746 6590204	543	1.102	0.3845	Yes
14	FKBP11	3170575	552	1.094	0.3985	Yes
15	IVNS1ABP	4760601 6520113	615	1.022	0.4086	Yes
16	EXOSC5	3370671	659	0.963	0.4190	Yes
17	EIF4B	5390563 5270577	688	0.933	0.4297	Yes
18	RPS19	5860066	739	0.891	0.4388	Yes
19	GPD1	2480095	747	0.885	0.4501	Yes
20	EIF2C2	770451	778	0.857	0.4597	Yes
21	G6PC3	1580487 5390253	789	0.849	0.4704	Yes
22	PA2G4	2030463	823	0.827	0.4795	Yes
23	ALDH3B1	4210010 6940403	834	0.821	0.4897	Yes
24	HSPE1	3170438	845	0.815	0.4999	Yes
25	ABCB6	6350138	943	0.753	0.5046	Yes
26	HYAL2	1500152	952	0.749	0.5140	Yes
27	SDC1	3440471 6350408	962	0.741	0.5233	Yes
28	HSPH1	1690017	981	0.731	0.5320	Yes
29	EXOSC2	6900471	1032	0.694	0.5384	Yes
30	ENO3	5270136	1086	0.660	0.5442	Yes
31	PAICS	610142	1102	0.654	0.5520	Yes
32	BHLHB2	7040603	1201	0.607	0.5547	Yes
33	HERPUD1	7100440	1202	0.607	0.5627	Yes
34	PER1	3290315	1217	0.596	0.5698	Yes
35	STMN1	1990717	1289	0.561	0.5733	Yes
36	SUCLG2	5340397 5700270	1313	0.552	0.5794	Yes
37	RPL22	4070070	1319	0.549	0.5863	Yes
38	PSMB3	4280594	1463	0.488	0.5850	Yes
39	EFNB1	2970433	1553	0.454	0.5861	Yes
40	OPRS1	6130128 6290717	1656	0.418	0.5861	Yes
41	POLR3E	380152	1681	0.410	0.5902	Yes
42	GTF2H1	2570746 2650148	1763	0.390	0.5910	Yes
43	MYOHD1	1410520	1790	0.380	0.5946	Yes
44	POLR2H	5890242	1899	0.346	0.5933	Yes
45	SRP72	3990427	1920	0.340	0.5967	Yes
46	RHEBL1	2810576	1959	0.327	0.5989	Yes
47	HMGN2	3140091	1962	0.326	0.6031	Yes
48	MORF4L2	6450133	2024	0.312	0.6039	Yes
49	EIF4G1	4070446	2101	0.290	0.6036	No
50	FHOD1	2680279	2286	0.246	0.5969	No
51	EEF1E1	4540711	2389	0.225	0.5943	No
52	H3F3A	2900086	2485	0.208	0.5919	No
53	TNFRSF21	6380100	2502	0.202	0.5937	No
54	UBXD3	5050193	2750	0.161	0.5824	No
55	PPARGC1B	3290114	2856	0.146	0.5786	No
56	PTMA	5570148	2997	0.128	0.5727	No
57	PSEN2	130382	3230	0.104	0.5615	No
58	CACNA1D	1740315 4730731	3233	0.103	0.5627	No
59	FARP1	5290102 7100341	3243	0.103	0.5636	No
60	B4GALT2	780037	3257	0.101	0.5642	No
61	CDC14A	4050132	3274	0.100	0.5647	No
62	CTSF	6100021	3285	0.099	0.5654	No
63	CAMK4	1690091	3297	0.098	0.5661	No
64	AVP	2100113	3308	0.097	0.5669	No
65	GPX1	4150093	3336	0.095	0.5667	No
66	MYST3	5270500	3341	0.094	0.5677	No
67	MPP3	1400056 4480411 6770168	3465	0.084	0.5621	No
68	SLC39A7	5570131	3559	0.078	0.5581	No
69	RPL13A	2680519 5700142	3580	0.077	0.5580	No
70	LTBR	2450341	3790	0.064	0.5475	No
71	AMPD2	630093 1170070	3791	0.064	0.5484	No
72	SYT3	6380017	3804	0.063	0.5486	No
73	CNNM1	2190433	3911	0.058	0.5436	No
74	SIRT1	1190731	4282	0.043	0.5241	No
75	XRN2	130603 1230113 4230309	4509	0.036	0.5123	No
76	ADCY3	2350347 3440242	4516	0.036	0.5124	No
77	NLN	1450576 5870575	4550	0.035	0.5111	No
78	HOXA3	3610632 6020358	4725	0.031	0.5021	No
79	TIAL1	4150048 6510605	4920	0.027	0.4919	No
80	ETV1	70735 2940603 5080463	5007	0.026	0.4876	No
81	SLC26A2	2360278	5053	0.025	0.4855	No
82	ARRDC3	4610390	5195	0.023	0.4781	No
83	SC5DL	6650390	5326	0.021	0.4713	No
84	COL2A1	460446 3940500	5364	0.021	0.4696	No
85	SEMA7A	2630239 5050593	5435	0.020	0.4661	No
86	NXPH1	3870546	5490	0.019	0.4634	No
87	DRD1	430025	5550	0.019	0.4604	No
88	SOCS5	3830398 7100093	5972	0.015	0.4378	No
89	NKX2-3	1990736 6940088	6032	0.015	0.4348	No
90	GPRC5C	1580372	6216	0.013	0.4250	No
91	ADAMTS17	6510739	6278	0.013	0.4219	No
92	POGK	5290315	6284	0.013	0.4218	No
93	CGN	5890139 6370167 6400537	6781	0.010	0.3950	No
94	SLC12A5	1980692	6881	0.009	0.3897	No
95	SYT6	2510280 3850128 4540064	6997	0.009	0.3836	No
96	LIN28	6590672	7157	0.008	0.3751	No
97	DNMT3A	4050068 4810717	7337	0.008	0.3655	No
98	RUNX2	1400193 4230215	7615	0.007	0.3506	No
99	TBX4	3060008	7671	0.006	0.3477	No
100	WEE1	3390070	7696	0.006	0.3464	No
101	PRKCE	5700053	7983	0.005	0.3310	No
102	DNAJB9	460114	8178	0.005	0.3205	No
103	LAP3	2570064	8297	0.004	0.3142	No
104	NPTX1	3710736	8394	0.004	0.3090	No
105	PLA2G4A	6380364	8462	0.004	0.3054	No
106	SNX5	1570021 6860609	8488	0.004	0.3041	No
107	SLC6A15	5290176 6040017	8575	0.004	0.2995	No
108	GRIN2A	6550538	8598	0.003	0.2984	No
109	BMP2K	60541 5570504	8691	0.003	0.2934	No
110	HOXC12	5270411	8967	0.002	0.2785	No
111	FADS3	3120079	9008	0.002	0.2764	No
112	NPM1	4730427	9338	0.001	0.2586	No
113	HS3ST3A1	2230497	9488	0.001	0.2505	No
114	MTHFD1	5900398 6520427	9650	0.000	0.2418	No
115	FLT3	2640487	9828	-0.000	0.2321	No
116	ELOVL4	5220333	9879	-0.000	0.2294	No
117	ABCA1	6290156	9882	-0.000	0.2293	No
118	HPCA	6860010	10122	-0.001	0.2164	No
119	TIMM9	2450484	10264	-0.001	0.2087	No
120	SET	6650286	10417	-0.002	0.2005	No
121	ARX	6900504	10474	-0.002	0.1975	No
122	PAX6	1190025	10550	-0.002	0.1935	No
123	SATB2	2470181	10578	-0.002	0.1920	No
124	TLL1	2680315	10917	-0.003	0.1737	No
125	BMP4	380113	11085	-0.004	0.1647	No
126	CHRM1	4280619	11231	-0.004	0.1569	No
127	FGF14	2630390 3520075 6770048	11478	-0.005	0.1436	No
128	PIGW	4810072	11507	-0.005	0.1422	No
129	LHX9	2350112	11515	-0.005	0.1419	No
130	SNCAIP	4010551	11782	-0.006	0.1275	No
131	FGF11	840292	11845	-0.006	0.1242	No
132	KIAA0427	1690435	12337	-0.009	0.0977	No
133	HOXC13	4070722	12441	-0.009	0.0923	No
134	EIF3S1	6130368 6770044	12499	-0.009	0.0893	No
135	SCFD2	2480504	12715	-0.011	0.0778	No
136	MAX	5220021	13089	-0.013	0.0577	No
137	HHIP	6940438	13190	-0.014	0.0524	No
138	SLC31A2	1450577	13220	-0.014	0.0511	No
139	GRK6	1500053	13347	-0.015	0.0444	No
140	RUSC1	6450093 6980575	13381	-0.015	0.0428	No
141	TDRD1	4230301 6110750	13453	-0.016	0.0392	No
142	SGTB	460170	13460	-0.016	0.0391	No
143	ENPP6	110524 580563	13651	-0.018	0.0290	No
144	DAZL	4050082	13735	-0.019	0.0247	No
145	CHST11	6760546	13822	-0.020	0.0203	No
146	ETV4	2450605	14141	-0.025	0.0034	No
147	HPCAL4	2600484	14159	-0.025	0.0028	No
148	LRP8	3610746 5360035	14178	-0.026	0.0022	No
149	MCM8	6130743	14235	-0.027	-0.0005	No
150	GTF2A1	4120138 4920524 5390110 1230397	14292	-0.028	-0.0032	No
151	GNA13	4590102	14479	-0.032	-0.0128	No
152	RXRB	1780040 5340438	14746	-0.040	-0.0267	No
153	CNOT4	2320242 6760706	14751	-0.040	-0.0264	No
154	HOXA4	940152	15131	-0.060	-0.0462	No
155	ARF6	3520026	15180	-0.063	-0.0480	No
156	EIF4E	1580403 70133 6380215	15251	-0.069	-0.0509	No
157	DAZAP1	5890563	15456	-0.085	-0.0608	No
158	MNT	4920575	15554	-0.096	-0.0648	No
159	ACVR2B	1660546	15583	-0.099	-0.0650	No
160	IPO13	3870088	15655	-0.106	-0.0675	No
161	BCKDHA	50189	15742	-0.114	-0.0706	No
162	CRMP1	4810014	15786	-0.119	-0.0714	No
163	PFN1	6130132	15921	-0.133	-0.0769	No
164	USP2	1190292 1240253 4850035	16083	-0.156	-0.0836	No
165	CLCN2	1940021	16149	-0.164	-0.0850	No
166	RPL19	5550592	16174	-0.168	-0.0841	No
167	HSPA4	1050170 3450309	16275	-0.182	-0.0871	No
168	UBE1	4150139 7050463	16334	-0.191	-0.0877	No
169	SLC20A1	6420014	16362	-0.197	-0.0866	No
170	MAT2A	4070026 4730079 6020280	16466	-0.218	-0.0893	No
171	ANXA6	2190014	16582	-0.244	-0.0923	No
172	PDK2	2690017	16623	-0.253	-0.0912	No
173	CENTB5	5690128	17229	-0.425	-0.1184	No
174	BCL9L	6940053	17235	-0.427	-0.1130	No
175	FCHSD2	5720092	17265	-0.438	-0.1088	No
176	EIF5A	1500059 5290022 6370026	17308	-0.457	-0.1051	No
177	DIABLO	2360170	17469	-0.528	-0.1068	No
178	MXD4	4810113	17661	-0.632	-0.1088	No
179	BCAS3	4050647	17690	-0.653	-0.1018	No
180	GABARAP	1450286	17808	-0.719	-0.0986	No
181	WBP2	3170128	18054	-0.942	-0.0995	No
182	HSPBAP1	4060022	18327	-1.387	-0.0960	No
183	RORC	1740121	18341	-1.439	-0.0777	No
184	PPP1R9B	3130619	18381	-1.573	-0.0591	No
185	TEF	1050050 3120397 4060487	18538	-2.509	-0.0345	No
186	BCL6	940100	18572	-2.937	0.0024	No