Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$USF_02
Enrichment Score (ES)	0.5472579
Normalized Enrichment Score (NES)	1.3170732
Nominal p-value	0.031626508
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PABPC1	2650180 2690253 6020632 1990270	3	6.314	0.0957	Yes
2	HNRPA1	4670398 5050687	71	2.999	0.1375	Yes
3	SNX8	3450315	78	2.947	0.1819	Yes
4	BAX	3830008	131	2.296	0.2139	Yes
5	CDKN2C	5050750 5130148	158	2.149	0.2452	Yes
6	GRN	4050239	163	2.113	0.2770	Yes
7	AKAP12	1450739	186	2.035	0.3067	Yes
8	UBE4B	780008 3610154	235	1.731	0.3304	Yes
9	UMPS	2340541 4730438	258	1.657	0.3543	Yes
10	PFDN2	4230156	382	1.369	0.3684	Yes
11	ATF4	730441 1740195	464	1.227	0.3826	Yes
12	AATF	5220575	518	1.134	0.3970	Yes
13	NUDC	4780025	524	1.127	0.4138	Yes
14	DDX3X	2190020	528	1.119	0.4306	Yes
15	GPR65	3120551	594	1.045	0.4430	Yes
16	TIMM8A	110279	616	1.021	0.4573	Yes
17	CCAR1	3190092	682	0.940	0.4680	Yes
18	EIF4B	5390563 5270577	688	0.933	0.4819	Yes
19	ASNA1	3830041	882	0.787	0.4834	Yes
20	VPS16	430064 3390041 6860301	885	0.786	0.4952	Yes
21	UTP14A	6590048	959	0.744	0.5026	Yes
22	RFC1	1190673	960	0.743	0.5138	Yes
23	CD164	3830594	1103	0.653	0.5160	Yes
24	CLN3	780368	1147	0.635	0.5234	Yes
25	PER1	3290315	1217	0.596	0.5287	Yes
26	PTGES2	4210097	1253	0.577	0.5355	Yes
27	COMMD3	2510259	1377	0.523	0.5368	Yes
28	MRPL27	2060131	1449	0.496	0.5405	Yes
29	SUPV3L1	1170072	1565	0.449	0.5410	Yes
30	OPRS1	6130128 6290717	1656	0.418	0.5425	Yes
31	GTF2H1	2570746 2650148	1763	0.390	0.5427	Yes
32	PRPS1	6350129	1900	0.346	0.5405	Yes
33	RHEBL1	2810576	1959	0.327	0.5424	Yes
34	ATP6V1C1	2690324 5220528	2023	0.312	0.5437	Yes
35	ARPP-19	5700025	2044	0.307	0.5473	Yes
36	TOPORS	4060592	2376	0.227	0.5328	No
37	TAF6L	1850056	2630	0.179	0.5218	No
38	UBXD3	5050193	2750	0.161	0.5177	No
39	ATP6V1A	6590242	2765	0.159	0.5194	No
40	MCAM	5130270 6620577	2819	0.152	0.5188	No
41	H2AFY	4730750	2921	0.136	0.5154	No
42	PTMA	5570148	2997	0.128	0.5133	No
43	STC2	4920601	2999	0.128	0.5152	No
44	RPS2	1340647	3130	0.114	0.5099	No
45	RAI14	770288 1660075	3225	0.105	0.5064	No
46	COPZ1	6940100	3281	0.099	0.5049	No
47	RAB3IL1	380685 5420176	3325	0.096	0.5040	No
48	GPX1	4150093	3336	0.095	0.5049	No
49	ALDH6A1	1770746	3398	0.090	0.5030	No
50	NCOA6	1780333 6450110	3413	0.089	0.5036	No
51	TCF12	3610324 7000156	3512	0.081	0.4995	No
52	TCERG1	2350551 4540397 5220746	3793	0.064	0.4853	No
53	MDM1	510528 1780280 2680152 2690181 3060025 3120487 4210601 4540037 4610142 5290110 6400433 6480743	3883	0.059	0.4813	No
54	LAMC2	450692 2680041 4200059 4670148	4016	0.053	0.4750	No
55	SIRT1	1190731	4282	0.043	0.4613	No
56	DHX35	1230440	4382	0.040	0.4565	No
57	SYNPO2L	5390719	4460	0.037	0.4529	No
58	C4A	360286 3830100 5220750 6420132	4463	0.037	0.4533	No
59	SSR1	5890100	4546	0.035	0.4494	No
60	RAB9A	1690279 3710671	4549	0.035	0.4499	No
61	BLNK	70288 6590092	4836	0.028	0.4348	No
62	ETV1	70735 2940603 5080463	5007	0.026	0.4259	No
63	PPARGC1A	4670040	5467	0.019	0.4013	No
64	PICALM	1940280	5596	0.018	0.3947	No
65	SMCR8	730653	5867	0.016	0.3803	No
66	POGK	5290315	6284	0.013	0.3579	No
67	ZIC3	380020	6897	0.009	0.3249	No
68	EIF3S10	1190079 3840176	6955	0.009	0.3219	No
69	PLS3	3290082	7056	0.009	0.3166	No
70	LIN28	6590672	7157	0.008	0.3113	No
71	DNMT3A	4050068 4810717	7337	0.008	0.3017	No
72	PIK3R1	4730671	7437	0.007	0.2965	No
73	HNRPD	4120021	7933	0.005	0.2697	No
74	XPO1	540707	7981	0.005	0.2672	No
75	TYR	5690139	7994	0.005	0.2667	No
76	SEMA3A	1780064	8102	0.005	0.2609	No
77	HNRPH2	2630040 5720671	8122	0.005	0.2600	No
78	FOXD3	6550156	8199	0.005	0.2559	No
79	APLN	6620632	8205	0.005	0.2557	No
80	VLDLR	870722 3060047 5340452 6550131	8325	0.004	0.2493	No
81	NPTX1	3710736	8394	0.004	0.2457	No
82	HOXC5	1580017	8463	0.004	0.2421	No
83	FZD6	360288	8479	0.004	0.2413	No
84	SOX10	6200538	8494	0.004	0.2406	No
85	IRS4	430341 1190450	8526	0.004	0.2390	No
86	SLC17A2	870593 2810035	8566	0.004	0.2369	No
87	CRLF1	3520092	8649	0.003	0.2325	No
88	SLC1A7	1990181	8710	0.003	0.2293	No
89	HOXD10	6100039	8737	0.003	0.2280	No
90	GLA	4610364	8755	0.003	0.2271	No
91	ARMET	5130670	9007	0.002	0.2135	No
92	UBXD2	4280092	9010	0.002	0.2134	No
93	GZMK	1410148	9036	0.002	0.2121	No
94	AP1S2	780279 4280707	9240	0.002	0.2011	No
95	NPM1	4730427	9338	0.001	0.1959	No
96	MTHFD1	5900398 6520427	9650	0.000	0.1790	No
97	CPT1A	6350093	9668	0.000	0.1781	No
98	VNN1	3940400	9823	-0.000	0.1697	No
99	HOXA11	6980133	9946	-0.000	0.1631	No
100	FMR1	5050075	9995	-0.001	0.1605	No
101	BMP6	2100128	10136	-0.001	0.1530	No
102	CLCN5	4200390	10276	-0.001	0.1454	No
103	OMG	6760066	10592	-0.002	0.1284	No
104	TNRC15	6760746	10769	-0.003	0.1189	No
105	RHOQ	520161	11000	-0.003	0.1065	No
106	NEUROD1	3060619	11107	-0.004	0.1008	No
107	TOM1L2	4810465	11228	-0.004	0.0943	No
108	LHFP	3440368	11264	-0.004	0.0925	No
109	TESK2	6520524	11378	-0.005	0.0865	No
110	FGF14	2630390 3520075 6770048	11478	-0.005	0.0812	No
111	TGFB2	4920292	11752	-0.006	0.0664	No
112	BDNF	2940128 3520368	11795	-0.006	0.0643	No
113	CARKL	6020068	11955	-0.007	0.0557	No
114	RNF128	1230300 5670273	12182	-0.008	0.0436	No
115	PFKFB1	2370128	12202	-0.008	0.0427	No
116	CAPN6	1740168	12459	-0.009	0.0290	No
117	SUMF1	730050	12581	-0.010	0.0225	No
118	HOXB5	2900538	12615	-0.010	0.0209	No
119	CREB5	2320368	12683	-0.010	0.0174	No
120	GGN	1410528 4210082 5290170	12724	-0.011	0.0154	No
121	SEC23IP	4540484 6200047	12923	-0.012	0.0049	No
122	KCNE4	2470102	12955	-0.012	0.0034	No
123	CALR	510446	13071	-0.013	-0.0027	No
124	MAX	5220021	13089	-0.013	-0.0034	No
125	SLC31A2	1450577	13220	-0.014	-0.0102	No
126	CBX5	3830072 6290167	13476	-0.016	-0.0238	No
127	DUSP8	6650039	13522	-0.017	-0.0260	No
128	TAC1	7000195 380706	13737	-0.019	-0.0373	No
129	ELAVL3	2850014	13742	-0.019	-0.0373	No
130	UBE2B	4780497	13779	-0.020	-0.0389	No
131	LRP5	2100397 3170484	13814	-0.020	-0.0405	No
132	NRIP3	1340372	14131	-0.025	-0.0572	No
133	GTF2A1	4120138 4920524 5390110 1230397	14292	-0.028	-0.0655	No
134	DUSP7	2940309	14367	-0.029	-0.0690	No
135	NFX1	450504	14588	-0.035	-0.0804	No
136	RPS28	3830221	14895	-0.046	-0.0963	No
137	CYR61	1240408 5290026 4120452 6550008	15026	-0.053	-0.1026	No
138	BTBD14B	3520601 4280162	15087	-0.057	-0.1050	No
139	HOXB7	4540706 4610358	15138	-0.060	-0.1068	No
140	DVL2	6110162	15246	-0.068	-0.1115	No
141	EIF4E	1580403 70133 6380215	15251	-0.069	-0.1107	No
142	STK16	1740154	15346	-0.075	-0.1147	No
143	SLC39A5	2900100 4610440	15389	-0.079	-0.1157	No
144	LAMA3	1190131 5290239	15423	-0.082	-0.1163	No
145	GNB2	2350053	15493	-0.088	-0.1187	No
146	NDUFA7	5900722	15495	-0.088	-0.1174	No
147	EGLN2	540086	15541	-0.093	-0.1184	No
148	TOP3A	7000435	15584	-0.099	-0.1192	No
149	HIVEP1	3850632	15782	-0.119	-0.1281	No
150	SLC12A6	610278 1980035 5340671	15789	-0.119	-0.1266	No
151	COQ4	1660551	15863	-0.128	-0.1286	No
152	DCTN4	3390010 5550170	15930	-0.134	-0.1302	No
153	SESN3	110687	16200	-0.171	-0.1422	No
154	FEN1	1770541	16424	-0.209	-0.1511	No
155	UROD	2470494	16465	-0.217	-0.1500	No
156	MAT2A	4070026 4730079 6020280	16466	-0.218	-0.1466	No
157	MAP4K1	4060692	16525	-0.231	-0.1463	No
158	COMMD8	5890358	16660	-0.261	-0.1496	No
159	ILF3	940722 3190647 6520110	16711	-0.273	-0.1482	No
160	PPM1A	1170301 5900273	16805	-0.296	-0.1487	No
161	MTCH2	3780603 6620215	16840	-0.304	-0.1460	No
162	UBE2L6	60048 1170687	16851	-0.307	-0.1419	No
163	SLC23A2	6660722	16927	-0.327	-0.1410	No
164	CHD4	5420059 6130338 6380717	17136	-0.395	-0.1462	No
165	SQSTM1	6550056	17307	-0.456	-0.1485	No
166	DUSP1	6860121	17371	-0.483	-0.1446	No
167	DDIT3	780373	17490	-0.535	-0.1429	No
168	BRDT	3940102	17613	-0.600	-0.1404	No
169	DNAJB5	2900215	17628	-0.611	-0.1319	No
170	CTNS	4480048	17725	-0.670	-0.1269	No
171	GABARAP	1450286	17808	-0.719	-0.1205	No
172	RUNX1	3840711	17835	-0.736	-0.1107	No
173	KBTBD2	2320014	18048	-0.935	-0.1080	No
174	PIP5K1A	4560672	18136	-1.032	-0.0971	No
175	ZFYVE26	6860152	18188	-1.106	-0.0831	No
176	ATF7IP	2690176 6770021	18306	-1.342	-0.0691	No
177	EPC1	1570050 5290095 6900193	18379	-1.571	-0.0491	No
178	NIT1	1230338 3940671	18488	-2.027	-0.0242	No
179	ISGF3G	3190131 7100142	18490	-2.051	0.0068	No