Details for gene set V$PAX8

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$PAX8_B
Enrichment Score (ES)	0.5937452
Normalized Enrichment Score (NES)	1.2756051
Nominal p-value	0.09983361
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SUPT16H	1240333	252	1.677	0.1660	Yes
2	NR1D1	2360471 770746 6590204	543	1.102	0.2684	Yes
3	ATP5G1	5290019	647	0.984	0.3682	Yes
4	PIK3R3	1770333	800	0.839	0.4499	Yes
5	SH3GL3	3800112	1278	0.567	0.4849	Yes
6	AHCYL1	540609	1353	0.532	0.5379	Yes
7	HOXB4	540131	1363	0.526	0.5937	Yes
8	MAN1C1	730133 870398 2340044	3220	0.105	0.5049	No
9	CLTC	6590458	3605	0.076	0.4923	No
10	TWIST1	5130619	3755	0.066	0.4914	No
11	CNTN6	2630711	3872	0.060	0.4916	No
12	APBA2BP	5700341	3880	0.059	0.4976	No
13	TANK	1090020 2060458 2370400	4226	0.045	0.4838	No
14	EML1	6980332	4392	0.040	0.4791	No
15	RHOBTB1	1410010	4485	0.037	0.4781	No
16	NRG1	1050332	4694	0.032	0.4703	No
17	HR	2690095 6200300	5224	0.022	0.4442	No
18	SLC25A28	6590600	5579	0.018	0.4270	No
19	TIA1	4670373	5675	0.017	0.4238	No
20	ALCAM	1050019	6077	0.014	0.4037	No
21	HOXA9	610494 4730040 5130601	6215	0.013	0.3977	No
22	GABRA1	130372	6457	0.012	0.3860	No
23	WNT4	4150619	6493	0.012	0.3853	No
24	BHLHB5	6510520	6870	0.010	0.3661	No
25	HOXB8	3710450	6909	0.009	0.3650	No
26	SRPK2	6380341	7422	0.007	0.3382	No
27	BNC2	4810603	7836	0.006	0.3166	No
28	POU4F3	2690035	7925	0.005	0.3124	No
29	HOXD12	580102	8362	0.004	0.2893	No
30	CALD1	1770129 1940397	8364	0.004	0.2897	No
31	TEK	6350541	8880	0.003	0.2622	No
32	GPR27	3440037	8968	0.002	0.2578	No
33	MYF5	1050739	9573	0.001	0.2253	No
34	RERG	5910324	9656	0.000	0.2209	No
35	PAK1IP1	2230438	9764	0.000	0.2152	No
36	GPC4	5910408	9860	-0.000	0.2101	No
37	PURA	3870156	9881	-0.000	0.2090	No
38	HOXD8	3710156	10011	-0.001	0.2021	No
39	DIO2	380504 540403	10682	-0.002	0.1663	No
40	RHOQ	520161	11000	-0.003	0.1496	No
41	KLHL13	6590731	11344	-0.005	0.1316	No
42	ATP1B4	5670546	11779	-0.006	0.1088	No
43	BDNF	2940128 3520368	11795	-0.006	0.1087	No
44	GABRG2	2350402 4210204 6130279 6550037	12053	-0.007	0.0956	No
45	PAPPA	4230463	12352	-0.009	0.0805	No
46	NEUROD6	4670731	12460	-0.009	0.0757	No
47	HOXB5	2900538	12615	-0.010	0.0685	No
48	TRERF1	6370017 6940138	12707	-0.011	0.0647	No
49	GGN	1410528 4210082 5290170	12724	-0.011	0.0650	No
50	HPN	2470167 5220181	13185	-0.014	0.0416	No
51	PUM2	4200441 5910446	13480	-0.016	0.0275	No
52	RARB	430139 1410138	13554	-0.017	0.0254	No
53	ELK4	460494 940369 4480136	13687	-0.019	0.0203	No
54	SP6	60484 510452 2690333	13718	-0.019	0.0207	No
55	NOL4	5050446 5360519	14046	-0.024	0.0056	No
56	RGS12	1190082 5390369	14559	-0.034	-0.0184	No
57	CAMK1D	1660100 2350309	14603	-0.035	-0.0170	No
58	JMJD1C	940575 2120025	14762	-0.040	-0.0212	No
59	HOXB7	4540706 4610358	15138	-0.060	-0.0349	No
60	ELMO3	110372 2640019	15459	-0.085	-0.0430	No
61	NEUROG1	380341	15544	-0.094	-0.0375	No
62	MNT	4920575	15554	-0.096	-0.0278	No
63	IARS	460528 1580739 1690008	15604	-0.101	-0.0196	No
64	TCF7L2	2190348 5220113	15650	-0.105	-0.0108	No
65	HIVEP1	3850632	15782	-0.119	-0.0051	No
66	TAF5	3450288 5890193 6860435	16067	-0.153	-0.0040	No
67	MAP2K5	2030440	16563	-0.240	-0.0050	No
68	PPM1A	1170301 5900273	16805	-0.296	0.0137	No
69	NPM3	3610300	17096	-0.382	0.0389	No
70	HNRPA0	2680048	17155	-0.401	0.0788	No