Details for gene set V$EN1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$EN1_01
Enrichment Score (ES)	0.67940485
Normalized Enrichment Score (NES)	1.493758
Nominal p-value	0.010398613
FDR q-value	0.43041256
FWER p-Value	0.905

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RPL38	70040 4060138 6200601	2	7.446	0.3200	Yes
2	UBE2H	1980142 2970079	91	2.668	0.4300	Yes
3	FIBCD1	1500500	175	2.061	0.5141	Yes
4	SLC6A9	2470520	276	1.588	0.5769	Yes
5	SYNJ2BP	4150672 6770706	358	1.425	0.6338	Yes
6	SIPA1L1	50292	476	1.207	0.6794	Yes
7	SAV1	5420541	1372	0.523	0.6536	No
8	MMP14	670079	1422	0.504	0.6726	No
9	MORF4L2	6450133	2024	0.312	0.6536	No
10	TCF4	520021	2397	0.223	0.6431	No
11	UTX	2900017 6770452	2878	0.142	0.6233	No
12	NEO1	1990154	2967	0.132	0.6243	No
13	ZADH2	520438	3011	0.127	0.6274	No
14	CDC14A	4050132	3274	0.100	0.6175	No
15	NRAS	6900577	3584	0.077	0.6042	No
16	RBM4	2360113 5080750	3623	0.075	0.6053	No
17	A2BP1	2370390 4590593 5550014	3728	0.068	0.6026	No
18	ELN	5080347	3801	0.064	0.6015	No
19	PDGFRA	2940332	3806	0.063	0.6040	No
20	TTC12	4480632	4001	0.054	0.5958	No
21	MYOG	3190672	4612	0.033	0.5644	No
22	NRG1	1050332	4694	0.032	0.5614	No
23	TFEB	3390121	4864	0.028	0.5534	No
24	CTCF	5340017	4877	0.028	0.5540	No
25	GPC3	6180735	4927	0.027	0.5525	No
26	GRIA1	1340152 3780750 4920440	5555	0.018	0.5195	No
27	FOXP2	3520561 4150372 4760524	5637	0.018	0.5159	No
28	OTP	2630070	5767	0.017	0.5096	No
29	RAPGEF5	1500603 3450427 6130056	5913	0.015	0.5024	No
30	EYA4	5360286	6098	0.014	0.4931	No
31	RTKN	5910253 6380082	6747	0.010	0.4586	No
32	HOXB8	3710450	6909	0.009	0.4503	No
33	PLCB1	2570050 7100102	6938	0.009	0.4492	No
34	ARHGAP6	2060121	6945	0.009	0.4493	No
35	NOS1	5860129	6971	0.009	0.4483	No
36	KLF15	4230164	7123	0.008	0.4405	No
37	NKX2-2	4150731	7316	0.008	0.4305	No
38	BCOR	1660452 3940053	7426	0.007	0.4249	No
39	UTY	5890441	7726	0.006	0.4091	No
40	PCDH9	2100136	7761	0.006	0.4075	No
41	EFEMP1	5860324	7835	0.006	0.4038	No
42	SH3BGRL2	1780239	8105	0.005	0.3895	No
43	HOXD3	6450154	8146	0.005	0.3875	No
44	GAP43	3130504	8425	0.004	0.3727	No
45	HOXD10	6100039	8737	0.003	0.3561	No
46	FGF17	3130022	8849	0.003	0.3502	No
47	ATP9B	3710494 6020239	8983	0.002	0.3431	No
48	NPR3	1580239	9259	0.002	0.3283	No
49	ANK2	6510546	9439	0.001	0.3187	No
50	PXMP3	2100088 1400458 6650671	9466	0.001	0.3174	No
51	SLC6A14	380368	9525	0.001	0.3143	No
52	IRX4	1980102	9546	0.001	0.3132	No
53	GPC4	5910408	9860	-0.000	0.2964	No
54	HOXA11	6980133	9946	-0.000	0.2918	No
55	RAB2B	6200091	10196	-0.001	0.2784	No
56	PAX6	1190025	10550	-0.002	0.2594	No
57	LMO1	3170528	10730	-0.003	0.2499	No
58	ERBB4	4610400 4810017	10735	-0.003	0.2498	No
59	PAMCI	2320687	10846	-0.003	0.2440	No
60	OTX2	1190471	11235	-0.004	0.2232	No
61	MITF	380056	11682	-0.006	0.1994	No
62	BDNF	2940128 3520368	11795	-0.006	0.1937	No
63	LAPTM4B	2060377 4150398	12225	-0.008	0.1709	No
64	GREM1	3940180	12578	-0.010	0.1523	No
65	HTR7	2680176	12720	-0.011	0.1452	No
66	ISL1	4810239	12907	-0.012	0.1356	No
67	NR4A3	2900021 5860095 5910039	12999	-0.012	0.1312	No
68	MAP3K5	6020041 6380162	13343	-0.015	0.1134	No
69	RARB	430139 1410138	13554	-0.017	0.1028	No
70	GNRH1	430167	13846	-0.021	0.0880	No
71	CDX2	3850349	14232	-0.027	0.0683	No
72	FHL1	60278	14777	-0.041	0.0408	No
73	HOXA4	940152	15131	-0.060	0.0243	No
74	RGS6	6040601	15152	-0.061	0.0259	No
75	EOMES	2100707	15552	-0.096	0.0084	No
76	MAP4K4	2360059	16313	-0.188	-0.0245	No
77	CREM	840156 6380438 6660041 6660168	16320	-0.189	-0.0167	No
78	MAPK14	5290731	16518	-0.228	-0.0175	No
79	CAMLG	1410184	16548	-0.238	-0.0089	No
80	NXF1	1570377	16850	-0.307	-0.0119	No
81	NOTCH1	3390114	18225	-1.164	-0.0360	No
82	RDH10	6650070	18297	-1.327	0.0172	No