Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	V$E2F_Q3
Enrichment Score (ES)	0.60090375
Normalized Enrichment Score (NES)	1.4354615
Nominal p-value	0.007788162
FDR q-value	0.57958543
FWER p-Value	0.997

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SFRS2	50707 380593	63	3.079	0.0598	Yes
2	HNRPA1	4670398 5050687	71	2.999	0.1210	Yes
3	MCM6	60092 540181 6510110	96	2.628	0.1737	Yes
4	TCP1	2450100 5130524	144	2.239	0.2171	Yes
5	CDC6	4570296 5360600	211	1.867	0.2518	Yes
6	MCM4	2760673 5420711	231	1.746	0.2867	Yes
7	TFRC	4050551	244	1.692	0.3208	Yes
8	NCL	2360463 4540279	407	1.334	0.3394	Yes
9	E2F1	5360093	513	1.141	0.3571	Yes
10	GCH1	670364 6550358	525	1.126	0.3796	Yes
11	DLST	2320722	634	1.002	0.3943	Yes
12	SHMT1	5900132	641	0.994	0.4144	Yes
13	APRIN	2810050	692	0.931	0.4308	Yes
14	ABCF2	630040 3140035 6450601	718	0.910	0.4481	Yes
15	RBBP7	430113 450450 2370309	801	0.838	0.4609	Yes
16	UNG	3130110 6100364	872	0.798	0.4735	Yes
17	NASP	2260139 2940369 5130707	920	0.768	0.4867	Yes
18	IMPDH2	5220138	950	0.750	0.5006	Yes
19	RFC1	1190673	960	0.743	0.5153	Yes
20	PIAS1	5340301	1110	0.650	0.5206	Yes
21	ZCCHC8	2260332 2350487	1183	0.613	0.5293	Yes
22	STMN1	1990717	1289	0.561	0.5352	Yes
23	SLC25A3	670112	1327	0.546	0.5444	Yes
24	LIG1	1980438 4540112 5570609	1347	0.535	0.5543	Yes
25	OLFML3	7100463	1428	0.502	0.5603	Yes
26	MCM3	5570068	1578	0.444	0.5613	Yes
27	PPP1R8	6290292	1657	0.418	0.5657	Yes
28	HIST1H2BK	6130433	1728	0.400	0.5701	Yes
29	SLC38A1	520465	1801	0.374	0.5739	Yes
30	CDC25A	3800184	1889	0.350	0.5764	Yes
31	PRPS1	6350129	1900	0.346	0.5829	Yes
32	AP4M1	70609 3440128	1912	0.342	0.5894	Yes
33	HMGN2	3140091	1962	0.326	0.5934	Yes
34	KPNB1	1690138	2115	0.286	0.5910	Yes
35	POLA2	940519	2129	0.283	0.5961	Yes
36	RBBP4	6650528	2148	0.279	0.6009	Yes
37	LASP1	1690528 2190341 6420341	2364	0.230	0.5940	No
38	DNAJC11	360465 3390215	2477	0.209	0.5922	No
39	MCM2	5050139	2513	0.201	0.5944	No
40	CDCA7	3060097	2549	0.194	0.5965	No
41	BAT3	1990594	2637	0.179	0.5955	No
42	TBX6	4730139 6840647	2682	0.173	0.5966	No
43	MCM7	3290292 5220056	2697	0.169	0.5993	No
44	GMNN	2630148	2861	0.145	0.5935	No
45	EZH2	6130605 6380524	2904	0.138	0.5940	No
46	MRPL18	6560341	3038	0.124	0.5894	No
47	KCNA1	2030594	3041	0.124	0.5918	No
48	PHF15	6550066 6860673	3065	0.122	0.5931	No
49	H2AFZ	1470168	3127	0.115	0.5922	No
50	ADAMTS2	2650025 6370133 6840670	3292	0.098	0.5853	No
51	EPHB2	1090288 1410377 2100541	3504	0.082	0.5755	No
52	KLF4	1850022 3830239 5570750	3653	0.072	0.5690	No
53	SSBP3	870717 1050377 7040551	3782	0.065	0.5634	No
54	E2F3	50162 460180	3800	0.064	0.5638	No
55	PRKDC	1400072 4230541	3859	0.060	0.5619	No
56	CNOT3	130519 4480292 1990609	4233	0.045	0.5426	No
57	SNPH	2680484	4242	0.044	0.5431	No
58	PAQR4	730736	4275	0.043	0.5423	No
59	UFD1L	870020	4293	0.043	0.5422	No
60	TBX3	2570672	4443	0.038	0.5349	No
61	CPNE5	6380673	4457	0.038	0.5350	No
62	RHD	4050168	4459	0.038	0.5357	No
63	STAG2	4540132	4548	0.035	0.5317	No
64	BARHL1	4210113	4661	0.032	0.5263	No
65	NDUFA11	3780333	4675	0.032	0.5262	No
66	CTCF	5340017	4877	0.028	0.5159	No
67	TRIM47	5080717	4999	0.026	0.5099	No
68	ADCY8	6760519	5456	0.019	0.4856	No
69	SFRS1	2360440	5619	0.018	0.4772	No
70	HS6ST3	5910138	6160	0.014	0.4482	No
71	PCSK1	2350148	6251	0.013	0.4436	No
72	JPH1	610739	6272	0.013	0.4428	No
73	SLC6A4	2230372	6511	0.011	0.4302	No
74	KCND2	1170128 2100112	6883	0.009	0.4103	No
75	ARHGAP6	2060121	6945	0.009	0.4072	No
76	FMO4	360735	7640	0.007	0.3697	No
77	WEE1	3390070	7696	0.006	0.3669	No
78	SMAD6	870504	7715	0.006	0.3660	No
79	ASCL1	6650100	7766	0.006	0.3634	No
80	PODN	3710068	7878	0.006	0.3575	No
81	HNRPD	4120021	7933	0.005	0.3547	No
82	ATRX	2340039 3610132 4210373	7963	0.005	0.3533	No
83	ERBB2IP	580253 1090672	8001	0.005	0.3514	No
84	GRIK2	4610164	8115	0.005	0.3454	No
85	PAPOLG	2470400	8123	0.005	0.3451	No
86	STK35	2360121	8338	0.004	0.3336	No
87	POLE2	6110041	8700	0.003	0.3141	No
88	HTF9C	3190048 4120132	8807	0.003	0.3084	No
89	AP1S2	780279 4280707	9240	0.002	0.2851	No
90	NPR3	1580239	9259	0.002	0.2841	No
91	NRP2	4070400 5860041 6650446	9922	-0.000	0.2483	No
92	TOPBP1	6020333	10056	-0.001	0.2411	No
93	SEZ6	3450722	10151	-0.001	0.2360	No
94	HIST1H1D	3440446	10299	-0.001	0.2281	No
95	DMD	1740041 3990332	11250	-0.004	0.1768	No
96	FBXO5	2630551	11280	-0.004	0.1753	No
97	IPO7	2190746	11285	-0.004	0.1751	No
98	NUP153	7000452	11299	-0.005	0.1745	No
99	ATAD2	870242 2260687	11466	-0.005	0.1657	No
100	RAD51	6110450 6980280	11516	-0.005	0.1631	No
101	PEG3	3710020	11767	-0.006	0.1497	No
102	EPHB1	4610056	11784	-0.006	0.1490	No
103	TREX2	4920707	12069	-0.007	0.1337	No
104	CASP8AP2	5910593	12474	-0.009	0.1121	No
105	MEIS1	1400575	12634	-0.010	0.1037	No
106	ONECUT1	6450136	12669	-0.010	0.1020	No
107	SEMA5A	6200110 6520435	13123	-0.013	0.0778	No
108	UXT	110019 5080066	13156	-0.013	0.0763	No
109	CACNA1G	3060161 4810706 5550722	13288	-0.014	0.0695	No
110	LHX5	2350097	13370	-0.015	0.0654	No
111	CBX5	3830072 6290167	13476	-0.016	0.0601	No
112	CLTA	450010	13536	-0.017	0.0572	No
113	SALL1	5420020 7050195	13700	-0.019	0.0488	No
114	NOL4	5050446 5360519	14046	-0.024	0.0306	No
115	ARID4A	520156 1050707	14162	-0.026	0.0249	No
116	MCM8	6130743	14235	-0.027	0.0216	No
117	ATE1	290491 6940722	14363	-0.029	0.0153	No
118	DPYSL2	2100427 3130112 5700324	14586	-0.035	0.0040	No
119	MDGA1	1170139	14696	-0.038	-0.0012	No
120	HIST1H2AH	3710333	15047	-0.055	-0.0190	No
121	PVRL1	2570167 5220519 5890500 3190309	15059	-0.055	-0.0184	No
122	INSM1	3450671	15151	-0.061	-0.0221	No
123	E2F7	4200056	15660	-0.106	-0.0474	No
124	DDB2	3520341 4610168 4850184 4920717	15677	-0.108	-0.0461	No
125	CTDSP1	6650215 6940731	15763	-0.117	-0.0483	No
126	KLF5	3840348	15876	-0.129	-0.0517	No
127	DNMT1	2260097	15974	-0.140	-0.0541	No
128	ING3	110438 2060390	16172	-0.167	-0.0613	No
129	PCNA	940754	16216	-0.173	-0.0601	No
130	PLK4	430162 5720110	16348	-0.194	-0.0632	No
131	USP1	2760541 5690438 6220673	16451	-0.214	-0.0643	No
132	MAT2A	4070026 4730079 6020280	16466	-0.218	-0.0606	No
133	PCSK4	130687 670711 3170075 6400411	16490	-0.222	-0.0573	No
134	ORC1L	2370328 6110390	16498	-0.223	-0.0531	No
135	FLI1	3990142	16745	-0.280	-0.0606	No
136	CDC45L	70537 3130114	17001	-0.348	-0.0673	No
137	PPP1CC	6380300 2510647	17032	-0.357	-0.0616	No
138	SLC25A14	4760180	17166	-0.403	-0.0605	No
139	PIM1	630047	17249	-0.433	-0.0561	No
140	RANBP1	430215 1090180	17406	-0.499	-0.0543	No
141	PHF12	870400 3130687	17447	-0.516	-0.0458	No
142	MAZ	3360121 6940750	17577	-0.577	-0.0410	No
143	PHF13	450435	17710	-0.663	-0.0345	No
144	RAB11B	3990609	17752	-0.685	-0.0227	No
145	SYT11	630433	17765	-0.693	-0.0091	No
146	MXD3	6220014	17993	-0.868	-0.0036	No
147	DCK	6900411	18454	-1.815	0.0088	No