Details for gene set V$CP2

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	V$CP2_02
Enrichment Score (ES)	-0.57118094
Normalized Enrichment Score (NES)	-1.4516453
Nominal p-value	0.0
FDR q-value	0.24437967
FWER p-Value	0.945

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DDIT4	2570408	281	1.582	0.0215	No
2	NR1D1	2360471 770746 6590204	543	1.102	0.0329	No
3	PRKACA	2640731 4050048	715	0.911	0.0448	No
4	ALDH3B1	4210010 6940403	834	0.821	0.0574	No
5	PHPT1	7050537	1028	0.697	0.0632	No
6	KLHDC3	3830717	1341	0.538	0.0587	No
7	RASSF1	2760364 4850725	1376	0.523	0.0690	No
8	GRB7	2100471	1477	0.484	0.0748	No
9	KCTD15	2810735	1516	0.469	0.0837	No
10	PPP1R16B	3520300	1559	0.450	0.0918	No
11	NISCH	4850301	1622	0.429	0.0984	No
12	MRPL14	2370168	1685	0.409	0.1045	No
13	H3F3B	1410300	1955	0.329	0.0976	No
14	MORF4L2	6450133	2024	0.312	0.1011	No
15	CS	5080600	2070	0.301	0.1057	No
16	RYR1	2510114 3130408 3710086	2238	0.255	0.1026	No
17	HTATIP	5360739	2421	0.219	0.0978	No
18	TGFBR2	1780711 1980537 6550398	2610	0.183	0.0918	No
19	LHX2	3610463	2645	0.178	0.0941	No
20	CAMK2G	630097	2670	0.174	0.0969	No
21	GMPPB	4610538	2724	0.165	0.0978	No
22	FKBP2	2320025	2799	0.153	0.0974	No
23	PRKAG1	6450091	3321	0.096	0.0714	No
24	NR2F1	4120528 360402	3333	0.095	0.0730	No
25	RHBDF1	380538	3391	0.091	0.0720	No
26	SHB	4920494	3522	0.080	0.0668	No
27	RBBP6	2320129	3567	0.078	0.0662	No
28	CNTN6	2630711	3872	0.060	0.0512	No
29	EPN3	2350592	3876	0.060	0.0524	No
30	PPP2R5C	3310121 6650672	3930	0.057	0.0508	No
31	TUFT1	540047 2370010	4035	0.052	0.0464	No
32	DSCAM	1780050 2450731 2810438	4405	0.039	0.0273	No
33	MMP11	1980619	4747	0.030	0.0096	No
34	GPC3	6180735	4927	0.027	0.0005	No
35	ETV1	70735 2940603 5080463	5007	0.026	-0.0032	No
36	RTN1	4150452 4850176	5345	0.021	-0.0210	No
37	FGF9	1050195	5517	0.019	-0.0298	No
38	STAC2	7100022	5535	0.019	-0.0303	No
39	SLC25A28	6590600	5579	0.018	-0.0322	No
40	FOXP2	3520561 4150372 4760524	5637	0.018	-0.0349	No
41	STARD13	540722	5844	0.016	-0.0457	No
42	COX8C	4670154	5888	0.016	-0.0476	No
43	DHH	2120433	5923	0.015	-0.0491	No
44	TBX2	1990563	5988	0.015	-0.0523	No
45	TNNC1	1990575	6161	0.014	-0.0613	No
46	FEV	840369 5860139	6214	0.013	-0.0638	No
47	GPRC5C	1580372	6216	0.013	-0.0635	No
48	NRIP2	5390288	6217	0.013	-0.0632	No
49	MAPRE3	7050504	6232	0.013	-0.0637	No
50	NFATC4	2470735	6252	0.013	-0.0644	No
51	RNF121	110079 1580279	6270	0.013	-0.0650	No
52	TLX3	510619	6597	0.011	-0.0824	No
53	EFNA3	6370390	6659	0.011	-0.0855	No
54	DCX	130075 5360025 7050673	6737	0.010	-0.0894	No
55	PFTK1	1780181	6876	0.009	-0.0967	No
56	SRMS	5360402	7013	0.009	-0.1038	No
57	KCNE3	5550195	7024	0.009	-0.1042	No
58	HPCAL1	1980129 2350348	7052	0.009	-0.1054	No
59	GSH1	2760242	7103	0.009	-0.1079	No
60	CITED1	2350670	7176	0.008	-0.1117	No
61	KIF1C	2480484	7189	0.008	-0.1121	No
62	GNB3	1230167	7194	0.008	-0.1121	No
63	LYN	6040600	7424	0.007	-0.1244	No
64	HSPA1L	4010538	7540	0.007	-0.1305	No
65	PODN	3710068	7878	0.006	-0.1486	No
66	MID2	4120309	7926	0.005	-0.1510	No
67	FOXL2	5670537	7946	0.005	-0.1519	No
68	CALD1	1770129 1940397	8364	0.004	-0.1744	No
69	CREB1	1500717 2230358 3610600 6550601	8539	0.004	-0.1837	No
70	SLC26A9	3440722 5340088 7510093	8546	0.004	-0.1840	No
71	UPK2	60176	8719	0.003	-0.1932	No
72	BRUNOL6	6840373	8865	0.003	-0.2010	No
73	SLC2A9	3290301	9026	0.002	-0.2096	No
74	AQP6	510736 1570484	9134	0.002	-0.2154	No
75	FRMD3	3440731	9227	0.002	-0.2203	No
76	TBC1D5	5360619 6130603	9297	0.001	-0.2241	No
77	XPNPEP1	2640750 3850315 6200242	9367	0.001	-0.2278	No
78	ODC1	5670168	9621	0.001	-0.2415	No
79	PCDHB4	670184	9933	-0.000	-0.2583	No
80	ARHGAP5	2510619 3360035	9989	-0.001	-0.2613	No
81	ADRA1A	1230446 2260390	10080	-0.001	-0.2661	No
82	HOXB6	4210739	10097	-0.001	-0.2670	No
83	NRXN3	1400546 3360471	10155	-0.001	-0.2700	No
84	ARX	6900504	10474	-0.002	-0.2872	No
85	PTHLH	5290739	10686	-0.002	-0.2986	No
86	RAB10	2360008 5890020	10751	-0.003	-0.3020	No
87	PAK7	3830164	10833	-0.003	-0.3063	No
88	BMP4	380113	11085	-0.004	-0.3198	No
89	DSC2	840484	11598	-0.006	-0.3474	No
90	NNAT	4920053 5130253	11599	-0.006	-0.3473	No
91	C1QTNF5	1690402	11609	-0.006	-0.3477	No
92	FOXA1	3710609	11619	-0.006	-0.3480	No
93	BDNF	2940128 3520368	11795	-0.006	-0.3574	No
94	HIF1A	5670605	12286	-0.008	-0.3837	No
95	PITX2	870537 2690139	12317	-0.009	-0.3851	No
96	P518	3610435	12326	-0.009	-0.3854	No
97	PAPPA	4230463	12352	-0.009	-0.3865	No
98	CAPN6	1740168	12459	-0.009	-0.3921	No
99	TRERF1	6370017 6940138	12707	-0.011	-0.4052	No
100	PLXNA3	7050164	13167	-0.014	-0.4297	No
101	MOGAT2	60139	13354	-0.015	-0.4395	No
102	WNT10B	510050	13648	-0.018	-0.4549	No
103	TXNL5	1190609 1400164	13710	-0.019	-0.4578	No
104	GNAQ	430670 4210131 5900736	13759	-0.019	-0.4599	No
105	RPL41	6940112	13805	-0.020	-0.4619	No
106	PAX2	6040270 7000133	13849	-0.021	-0.4638	No
107	IRX3	4200112	13886	-0.021	-0.4652	No
108	NOL4	5050446 5360519	14046	-0.024	-0.4733	No
109	KIF5A	510435	14097	-0.024	-0.4754	No
110	DDR1	2060044 5220180	14631	-0.036	-0.5035	No
111	LTBP1	780035 2100746 2760402 3780551 6550184 6860193	14737	-0.040	-0.5083	No
112	LDB2	5670441 6110170	14784	-0.041	-0.5098	No
113	MDK	3840020	14925	-0.048	-0.5163	No
114	NTRK3	4050687 4070167 4610026 6100484	14992	-0.052	-0.5186	No
115	BTBD14B	3520601 4280162	15087	-0.057	-0.5224	No
116	TRAF4	3060041 4920528 6980286	15313	-0.073	-0.5329	No
117	ZNF385	450176 4810358	15405	-0.080	-0.5360	No
118	CPNE1	3440131	15464	-0.086	-0.5371	No
119	MNT	4920575	15554	-0.096	-0.5397	No
120	KIFAP3	3800524 4590082 6940075	15563	-0.096	-0.5379	No
121	NEK8	5700180	15862	-0.128	-0.5511	No
122	SCAMP5	5550368 6290021	16111	-0.159	-0.5608	No
123	YWHAG	3780341	16288	-0.184	-0.5661	Yes
124	UBE1	4150139 7050463	16334	-0.191	-0.5641	Yes
125	DDAH2	4480551	16392	-0.203	-0.5625	Yes
126	CRK	1230162 4780128	16406	-0.206	-0.5584	Yes
127	TLN1	6590411	16541	-0.235	-0.5602	Yes
128	SLC9A1	2650093	16624	-0.253	-0.5588	Yes
129	BACH1	290195	16687	-0.268	-0.5559	Yes
130	FLI1	3990142	16745	-0.280	-0.5525	Yes
131	RHBDL1	1500736	17090	-0.379	-0.5624	Yes
132	ATP10D	4850139	17119	-0.391	-0.5548	Yes
133	GSK3B	5360348	17132	-0.395	-0.5463	Yes
134	CHD4	5420059 6130338 6380717	17136	-0.395	-0.5373	Yes
135	SLC25A14	4760180	17166	-0.403	-0.5295	Yes
136	MAPK3	580161 4780035	17348	-0.472	-0.5284	Yes
137	TRIM8	6130441	17410	-0.501	-0.5201	Yes
138	MAST2	6200348	17415	-0.502	-0.5087	Yes
139	CLDN4	4920739	17443	-0.513	-0.4982	Yes
140	HCFC1	2260008	17532	-0.552	-0.4902	Yes
141	LZTS2	2260440	17544	-0.558	-0.4778	Yes
142	GLTP	3440603	17562	-0.569	-0.4655	Yes
143	NRF1	2650195	17655	-0.626	-0.4560	Yes
144	TRPV2	7100348	17750	-0.684	-0.4452	Yes
145	PRKCH	5720079	17758	-0.689	-0.4296	Yes
146	GABARAP	1450286	17808	-0.719	-0.4156	Yes
147	JUNB	4230048	17941	-0.818	-0.4038	Yes
148	FLOT2	50358 4210068 5080397	18102	-0.989	-0.3895	Yes
149	NGFRAP1	6770195	18200	-1.130	-0.3686	Yes
150	DNAJB1	1090041	18250	-1.209	-0.3432	Yes
151	CDC42EP3	2480138	18299	-1.335	-0.3148	Yes
152	CAP1	2650278	18305	-1.341	-0.2840	Yes
153	FBS1	2570520	18317	-1.366	-0.2529	Yes
154	BCL11B	2680673	18339	-1.434	-0.2207	Yes
155	DEF6	840593	18349	-1.475	-0.1870	Yes
156	EPC1	1570050 5290095 6900193	18379	-1.571	-0.1521	Yes
157	PPP1R9B	3130619	18381	-1.573	-0.1157	Yes
158	KCNH2	1170451	18397	-1.648	-0.0783	Yes
159	PTCRA	6940142	18404	-1.670	-0.0398	Yes
160	DUSP6	5910286 7100070	18507	-2.210	0.0059	Yes