Details for gene set TTGCACT,MIR-130A,MIR-301,MIR-130B[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	TTGCACT,MIR-130A,MIR-301,MIR-130B
Enrichment Score (ES)	-0.5449053
Normalized Enrichment Score (NES)	-1.4544603
Nominal p-value	0.0
FDR q-value	0.2519002
FWER p-Value	0.94

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CHST1	50601	46	3.332	0.0466	No
2	INHBB	2680092	227	1.782	0.0631	No
3	SLMAP	3120093 4760128 5390528	271	1.613	0.0845	No
4	GJA1	5220731	295	1.543	0.1060	No
5	RAB34	770411	558	1.087	0.1078	No
6	MBNL1	2640762 7100048	713	0.914	0.1129	No
7	FASTK	2690053 4280288 4610551 6370292	733	0.896	0.1250	No
8	SKP1A	2450102	939	0.756	0.1250	No
9	SMOC2	1170170	988	0.724	0.1331	No
10	CUL3	1850520	1143	0.637	0.1341	No
11	YTHDF2	4060332 4610279	1219	0.596	0.1388	No
12	RASSF1	2760364 4850725	1376	0.523	0.1380	No
13	ABCB7	4150324	1591	0.440	0.1328	No
14	CYLD	6590079	1812	0.370	0.1263	No
15	SFMBT1	2360450 2370070	2106	0.288	0.1146	No
16	SNX2	2470068 3360364 6510064	2246	0.254	0.1107	No
17	UBE2D2	4590671 6510446	2298	0.244	0.1115	No
18	SPG20	3360202	2382	0.226	0.1104	No
19	TTYH3	2100082	2444	0.215	0.1102	No
20	TRPS1	870100	2453	0.213	0.1129	No
21	TGFBR2	1780711 1980537 6550398	2610	0.183	0.1071	No
22	BLCAP	3990253	2640	0.179	0.1082	No
23	MIB1	3800537	2654	0.176	0.1101	No
24	TPP1	3990446	2684	0.172	0.1110	No
25	FBXO28	1340358 4730100	2713	0.167	0.1120	No
26	RAP2C	1690132	2779	0.157	0.1107	No
27	TMEM32	1170452	3081	0.120	0.0961	No
28	HABP4	840487	3132	0.114	0.0951	No
29	STC1	360161	3185	0.109	0.0938	No
30	LRP4	1740253	3344	0.094	0.0866	No
31	SMAD5	5700497	3366	0.092	0.0868	No
32	ACSL1	2900520	3475	0.083	0.0822	No
33	NME7	60170 1230551 2850333 4200102 4560411 5090647	3524	0.080	0.0808	No
34	RHOT1	6760692	3586	0.077	0.0786	No
35	MID1IP1	2570739	3601	0.076	0.0789	No
36	CLTC	6590458	3605	0.076	0.0799	No
37	KIT	7040095	3619	0.075	0.0803	No
38	CSF1	3120400	3729	0.068	0.0753	No
39	ARID4B	730754 6660026	3777	0.065	0.0737	No
40	SOX21	1050110 4670041 6660338	3799	0.064	0.0735	No
41	PDGFRA	2940332	3806	0.063	0.0741	No
42	EPC2	2470095	3830	0.062	0.0738	No
43	ARFIP1	3130601	3842	0.061	0.0741	No
44	ACVR1	6840671	3959	0.056	0.0686	No
45	SH3D19	6020520	3979	0.055	0.0684	No
46	PPARG	1990168 2680603 6130632	3994	0.054	0.0684	No
47	CD69	380167 4730088	4094	0.050	0.0638	No
48	PRKD3	5220520 5890519	4124	0.049	0.0629	No
49	CANX	4760402	4220	0.045	0.0584	No
50	EDA	6420441	4230	0.045	0.0586	No
51	SNPH	2680484	4242	0.044	0.0586	No
52	ROBO2	450136	4394	0.040	0.0510	No
53	PTPRM	6370136	4422	0.038	0.0501	No
54	RUNX3	3800546	4613	0.033	0.0402	No
55	ESR1	4060372 5860193	4638	0.033	0.0394	No
56	HOXA3	3610632 6020358	4725	0.031	0.0352	No
57	ZFYVE9	6980288 7100017	4737	0.030	0.0350	No
58	PRKAA1	510156	4753	0.030	0.0346	No
59	SNAP25	360520	4885	0.028	0.0279	No
60	RASD1	2450463	5027	0.025	0.0206	No
61	ARRDC3	4610390	5195	0.023	0.0118	No
62	RTN1	4150452 4850176	5345	0.021	0.0040	No
63	SASH1	4070270	5346	0.021	0.0043	No
64	NR3C2	2480324 6400093	5377	0.020	0.0030	No
65	ACSL4	510020 1240041 3190050 4540500 5570463	5473	0.019	-0.0019	No
66	ASXL2	130670	5645	0.018	-0.0110	No
67	ZCCHC14	5900288	5811	0.016	-0.0197	No
68	ARHGAP12	1050181	5828	0.016	-0.0203	No
69	STARD13	540722	5844	0.016	-0.0209	No
70	FSTL5	770280	5914	0.015	-0.0245	No
71	ZFPM2	460072	5951	0.015	-0.0262	No
72	SOCS5	3830398 7100093	5972	0.015	-0.0271	No
73	PTP4A1	130692	6117	0.014	-0.0347	No
74	PLAA	60706 6370369	6186	0.013	-0.0382	No
75	HIVEP2	6520538	6207	0.013	-0.0391	No
76	MAPRE3	7050504	6232	0.013	-0.0402	No
77	QKI	5220093 6130044	6276	0.013	-0.0424	No
78	MLLT6	3870168	6281	0.013	-0.0424	No
79	MAP3K9	3290707	6538	0.011	-0.0562	No
80	USP33	780047	6555	0.011	-0.0569	No
81	AKAP7	4610044	6695	0.010	-0.0643	No
82	WDFY3	3610041 4560333 4570273	6839	0.010	-0.0720	No
83	BIRC6	70148	6915	0.009	-0.0759	No
84	PLCB1	2570050 7100102	6938	0.009	-0.0770	No
85	ZBTB4	6450441	6973	0.009	-0.0787	No
86	DLL1	1770377	7009	0.009	-0.0805	No
87	SULF1	430575	7131	0.008	-0.0869	No
88	SOCS6	1170347 7100280	7409	0.007	-0.1019	No
89	AKAP1	110148 1740735 2260019 7000563	7514	0.007	-0.1075	No
90	RUNX2	1400193 4230215	7615	0.007	-0.1128	No
91	WEE1	3390070	7696	0.006	-0.1171	No
92	ATRX	2340039 3610132 4210373	7963	0.005	-0.1315	No
93	ERBB2IP	580253 1090672	8001	0.005	-0.1334	No
94	PTGFRN	4120524	8221	0.005	-0.1453	No
95	M6PR	2480458 3290593 3840324	8237	0.004	-0.1461	No
96	MAMDC1	3710129 4480075	8251	0.004	-0.1467	No
97	EMX2	1660092	8392	0.004	-0.1543	No
98	NPTX1	3710736	8394	0.004	-0.1543	No
99	GAP43	3130504	8425	0.004	-0.1558	No
100	RAPGEF4	6100563	8473	0.004	-0.1583	No
101	SNX5	1570021 6860609	8488	0.004	-0.1590	No
102	CALM2	6620463	8534	0.004	-0.1614	No
103	SLC24A3	5080707	8573	0.004	-0.1635	No
104	LRCH2	2900162	8604	0.003	-0.1650	No
105	ARHGEF12	3990195	8868	0.003	-0.1793	No
106	EDG1	4200619	8898	0.003	-0.1809	No
107	LDLR	5670386	8928	0.002	-0.1824	No
108	WNT1	4780148	8974	0.002	-0.1848	No
109	FOXF2	1240091	9092	0.002	-0.1912	No
110	BTBD7	730288	9131	0.002	-0.1932	No
111	CNOT7	2450338 5720397	9290	0.001	-0.2018	No
112	NHLH2	6200021	9445	0.001	-0.2102	No
113	ADCY2	4610100	9447	0.001	-0.2102	No
114	ARHGAP21	2100168	9474	0.001	-0.2116	No
115	UBE2D1	1850400	9493	0.001	-0.2126	No
116	EXOC5	7000711	9495	0.001	-0.2126	No
117	MAP3K12	2470373 6420162	9831	-0.000	-0.2309	No
118	ST8SIA3	6940427	9878	-0.000	-0.2334	No
119	ABCA1	6290156	9882	-0.000	-0.2335	No
120	HOXB3	520292	9888	-0.000	-0.2338	No
121	NRP2	4070400 5860041 6650446	9922	-0.000	-0.2356	No
122	UCP3	4200128 4210148	9927	-0.000	-0.2358	No
123	GDA	3290435	9947	-0.000	-0.2368	No
124	FMR1	5050075	9995	-0.001	-0.2394	No
125	BHLHB3	3450438	10001	-0.001	-0.2397	No
126	SHANK2	1500452	10059	-0.001	-0.2428	No
127	CLCN5	4200390	10276	-0.001	-0.2545	No
128	ABHD3	2370091	10318	-0.002	-0.2567	No
129	NPAT	3800594 4670026	10414	-0.002	-0.2619	No
130	MYT1	6770524	10449	-0.002	-0.2637	No
131	PTPRG	2650524 1340022	10604	-0.002	-0.2720	No
132	TRIM2	430546 1170286	10606	-0.002	-0.2721	No
133	ROBO1	3710398	10713	-0.003	-0.2778	No
134	ERBB4	4610400 4810017	10735	-0.003	-0.2789	No
135	R3HDM1	940685 3290161	10802	-0.003	-0.2825	No
136	EIF2C1	6900551	10857	-0.003	-0.2854	No
137	ATP11A	1240717 5570603	10950	-0.003	-0.2903	No
138	TSC1	1850672	10975	-0.003	-0.2916	No
139	MEOX2	6400288	11072	-0.004	-0.2967	No
140	NEUROD1	3060619	11107	-0.004	-0.2985	No
141	EFNB2	5340136	11171	-0.004	-0.3019	No
142	POU3F2	6620484	11225	-0.004	-0.3047	No
143	TAF4	1450170	11332	-0.005	-0.3104	No
144	POU4F1	2260315	11338	-0.005	-0.3107	No
145	TESK2	6520524	11378	-0.005	-0.3127	No
146	MAT2B	1690139 2510706	11381	-0.005	-0.3127	No
147	B4GALT5	1230692	11422	-0.005	-0.3149	No
148	RAI2	6770333	11595	-0.006	-0.3241	No
149	RXRA	3800471	11617	-0.006	-0.3252	No
150	GRM7	4230110	11793	-0.006	-0.3346	No
151	RAB5A	6520324	11803	-0.006	-0.3350	No
152	PGM2L1	2350035	11865	-0.007	-0.3383	No
153	SCRT1	6760736	11956	-0.007	-0.3431	No
154	ATP2B2	3780397	12061	-0.007	-0.3486	No
155	DOCK3	3290273 3360497 2850068	12070	-0.007	-0.3489	No
156	ST18	5720537	12151	-0.008	-0.3532	No
157	NRBF2	6110672	12340	-0.009	-0.3633	No
158	MAFB	1230471	12497	-0.009	-0.3717	No
159	PHACTR2	1580154	12556	-0.010	-0.3747	No
160	TRIM3	5570156	12623	-0.010	-0.3781	No
161	CREB5	2320368	12683	-0.010	-0.3812	No
162	WDR20	1240373	12864	-0.011	-0.3908	No
163	BMPR2	5340066 6960328	13057	-0.013	-0.4011	No
164	EREG	50519 4920129	13196	-0.014	-0.4084	No
165	HOXA5	6840026	13239	-0.014	-0.4105	No
166	SOX5	2370576 2900167 3190128 5050528	13250	-0.014	-0.4108	No
167	CSMD1	1780672	13316	-0.015	-0.4142	No
168	ADAMTS18	5690008	13348	-0.015	-0.4156	No
169	WNK3	4060053	13431	-0.016	-0.4199	No
170	ABCC5	2100600 5050692	13549	-0.017	-0.4260	No
171	SLC9A2	4920022 5910133	13559	-0.017	-0.4262	No
172	BTBD3	1980041 2510577 3190053 4200746	13823	-0.020	-0.4403	No
173	NPNT	130301	13826	-0.020	-0.4401	No
174	COL19A1	6220441	13920	-0.022	-0.4448	No
175	ATRN	870735 3360390	13936	-0.022	-0.4453	No
176	TARDBP	870390 2350093	13953	-0.022	-0.4458	No
177	PAFAH1B1	4230333 6420121 6450066	14002	-0.023	-0.4481	No
178	LNPEP	1170092 1940093 3120025	14085	-0.024	-0.4522	No
179	ADAM12	3390132 4070347	14089	-0.024	-0.4520	No
180	DCBLD2	5890333	14090	-0.024	-0.4517	No
181	NIPA1	380600	14166	-0.026	-0.4554	No
182	LRP8	3610746 5360035	14178	-0.026	-0.4556	No
183	ZNF3	1770193 2320047 2570273	14212	-0.026	-0.4570	No
184	WNT2B	3130088 5960575	14368	-0.029	-0.4650	No
185	TBC1D8	2340253	14517	-0.032	-0.4726	No
186	DPYSL2	2100427 3130112 5700324	14586	-0.035	-0.4758	No
187	TMEPAI	1340253	14599	-0.035	-0.4759	No
188	EIF2C4	2940577 5900563	14615	-0.035	-0.4762	No
189	ARHGAP1	2810010 5270064	14636	-0.036	-0.4768	No
190	CSNK1G1	840082 1230575 3940647	14719	-0.039	-0.4807	No
191	CNOT4	2320242 6760706	14751	-0.040	-0.4818	No
192	CHD9	430037 2570129 5420398	15012	-0.053	-0.4952	No
193	SNF1LK	6110403	15238	-0.067	-0.5064	No
194	SPATA2	1230215 5910541	15316	-0.073	-0.5096	No
195	MLLT10	1410288 3290142	15358	-0.077	-0.5107	No
196	PIGA	1940435 5290692	15419	-0.082	-0.5127	No
197	PAPD4	1580673 730605 5270112	15515	-0.090	-0.5166	No
198	CLOCK	1410070 2940292 3390075	15517	-0.090	-0.5153	No
199	SUV39H1	630112	15532	-0.092	-0.5147	No
200	NEUROG1	380341	15544	-0.094	-0.5139	No
201	VGLL4	6860463	15605	-0.101	-0.5157	No
202	E2F7	4200056	15660	-0.106	-0.5171	No
203	MTF1	520427 2340364	15674	-0.108	-0.5162	No
204	TIMP2	4780609	15713	-0.111	-0.5166	No
205	RNF38	1940746 3140133 3840601	15724	-0.113	-0.5155	No
206	STX6	4850750 6770278	15798	-0.120	-0.5177	No
207	BRWD1	3130048 3140168 6400601	15850	-0.126	-0.5186	No
208	DICER1	540286	15855	-0.127	-0.5170	No
209	ACBD5	3440397 6020600	15906	-0.131	-0.5178	No
210	USP48	2480010	16050	-0.149	-0.5234	No
211	AP1G1	2360671	16058	-0.151	-0.5215	No
212	CCRN4L	50438 5130372	16181	-0.169	-0.5257	No
213	RKHD1	6860577	16222	-0.174	-0.5253	No
214	RAB5B	130397 1980273 6900731	16259	-0.179	-0.5246	No
215	ATXN1	5550156	16338	-0.192	-0.5260	No
216	SNIP1	5360092	16535	-0.233	-0.5333	No
217	SMARCD2	3830619	16579	-0.244	-0.5320	No
218	DNM2	50176 3170279	16680	-0.265	-0.5335	No
219	BZRAP1	5290487	16725	-0.275	-0.5319	No
220	ULK2	50041 5050176	16965	-0.339	-0.5399	Yes
221	VPS24	3120687	17035	-0.357	-0.5384	Yes
222	EPS15	4200215	17038	-0.358	-0.5332	Yes
223	MECP2	1940450	17044	-0.360	-0.5282	Yes
224	PFKFB3	630706	17072	-0.370	-0.5242	Yes
225	TNRC6A	1240537 6130037 6200010	17167	-0.403	-0.5234	Yes
226	OGT	2360131 4610333	17176	-0.406	-0.5178	Yes
227	HECA	3310612	17186	-0.409	-0.5123	Yes
228	ENPP5	1780338	17203	-0.414	-0.5071	Yes
229	RALBP1	4780632	17268	-0.439	-0.5041	Yes
230	MTMR12	7000181	17366	-0.480	-0.5023	Yes
231	PHF12	870400 3130687	17447	-0.516	-0.4990	Yes
232	MYB	1660494 5860451 6130706	17450	-0.518	-0.4915	Yes
233	HRB	1660397 6110398	17455	-0.520	-0.4840	Yes
234	ITPK1	3360056	17460	-0.522	-0.4766	Yes
235	ATG16L1	5390292	17489	-0.535	-0.4702	Yes
236	MAP3K14	5890435	17492	-0.536	-0.4624	Yes
237	BAZ2A	730184	17621	-0.608	-0.4604	Yes
238	ITPR1	3450519	17658	-0.631	-0.4531	Yes
239	SOX4	2260091	17671	-0.637	-0.4443	Yes
240	IRF1	2340152 3450592 6290121 6980577	17795	-0.709	-0.4406	Yes
241	NCOA1	3610438	17802	-0.715	-0.4304	Yes
242	NDEL1	2370465	17853	-0.750	-0.4220	Yes
243	BACH2	6760131	17928	-0.809	-0.4141	Yes
244	ATP6V1B2	4060528	17939	-0.818	-0.4026	Yes
245	PELI1	3870215 6900040	17968	-0.838	-0.3918	Yes
246	SPEN	2060041	18077	-0.965	-0.3834	Yes
247	GADD45A	2900717	18078	-0.966	-0.3692	Yes
248	PSAP	2810338	18107	-0.996	-0.3560	Yes
249	ZFYVE26	6860152	18188	-1.106	-0.3441	Yes
250	KLF13	4670563	18251	-1.209	-0.3296	Yes
251	PITPNM2	1580044	18258	-1.232	-0.3118	Yes
252	MAML1	2760008	18267	-1.263	-0.2936	Yes
253	DDX6	2630025 6770408	18287	-1.309	-0.2754	Yes
254	WDR1	1090129 3990121	18353	-1.479	-0.2571	Yes
255	SPHK2	2030487 4120670 4850114	18441	-1.776	-0.2356	Yes
256	HBP1	2510102 3130010 4210619	18447	-1.783	-0.2096	Yes
257	LRIG1	1050136	18478	-1.980	-0.1821	Yes
258	CNIH	2190484 5080609	18545	-2.546	-0.1481	Yes
259	ELK3	460377 1400762 3710497	18561	-2.759	-0.1083	Yes
260	SMOC1	840039	18589	-3.340	-0.0605	Yes
261	BTG1	4200735 6040131 6200133	18607	-4.199	0.0005	Yes