Details for gene set TGATTTRY_V$GFI1

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	TGATTTRY_V$GFI1_01
Enrichment Score (ES)	-0.5698082
Normalized Enrichment Score (NES)	-1.4861953
Nominal p-value	0.0
FDR q-value	0.24040182
FWER p-Value	0.863

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SFRS6	60224	529	1.115	0.0119	No
2	ATP5G2	840068	759	0.874	0.0313	No
3	CCND1	460524 770309 3120576 6980398	1439	0.499	0.0126	No
4	USP5	4850017	1672	0.412	0.0150	No
5	MAPK10	6110193	1857	0.358	0.0180	No
6	DGCR8	3450632	2008	0.316	0.0213	No
7	TLK1	7100605	2300	0.243	0.0144	No
8	CDCA7	3060097	2549	0.194	0.0080	No
9	KPNA3	7040088	2647	0.178	0.0092	No
10	EMILIN2	70253	2658	0.176	0.0151	No
11	ARPC5L	1090148	2867	0.143	0.0090	No
12	DTNA	1340600 1780731 2340278 2850132	3022	0.126	0.0052	No
13	MAPK8	2640195	3135	0.114	0.0033	No
14	STC1	360161	3185	0.109	0.0046	No
15	PPP2R2A	2900014 5700575	3231	0.104	0.0059	No
16	PPAP2A	1170397 3440288 3930270	3304	0.098	0.0056	No
17	GPX1	4150093	3336	0.095	0.0073	No
18	GSS	6130465 6900398	3492	0.083	0.0019	No
19	TCF12	3610324 7000156	3512	0.081	0.0039	No
20	MRAS	2030524	3587	0.077	0.0026	No
21	FBXO32	110037 610750	3750	0.067	-0.0037	No
22	CDH13	5130368 5340114	3843	0.061	-0.0065	No
23	CNKSR1	730528 3390672	3844	0.061	-0.0043	No
24	G6PC	430093	4145	0.048	-0.0188	No
25	NR5A1	70707	4389	0.040	-0.0306	No
26	CAB39L	5670040	4391	0.040	-0.0292	No
27	ESR1	4060372 5860193	4638	0.033	-0.0413	No
28	LCP1	4280397	4642	0.033	-0.0403	No
29	HOXA3	3610632 6020358	4725	0.031	-0.0437	No
30	SNAP25	360520	4885	0.028	-0.0513	No
31	VPREB3	3780131	4947	0.027	-0.0536	No
32	POU2F1	70577 430373 4850324 5910056	5051	0.025	-0.0583	No
33	JPH4	780020	5261	0.022	-0.0689	No
34	ADCY8	6760519	5456	0.019	-0.0787	No
35	PPARGC1A	4670040	5467	0.019	-0.0785	No
36	IL21	1850047	5610	0.018	-0.0856	No
37	FOXP2	3520561 4150372 4760524	5637	0.018	-0.0864	No
38	ESRRG	4010181	5656	0.018	-0.0867	No
39	GAS2	1340082	5683	0.017	-0.0875	No
40	NAP1L3	6020079	5796	0.016	-0.0930	No
41	FN1	1170601 2970647 6220288 6940037	5872	0.016	-0.0965	No
42	LRP2	1400204 3290706	5929	0.015	-0.0990	No
43	ZFPM2	460072	5951	0.015	-0.0995	No
44	HOXC8	6220050	5955	0.015	-0.0992	No
45	MAP2K7	2260086	5971	0.015	-0.0994	No
46	CASKIN1	580035 3710500	6005	0.015	-0.1007	No
47	STK31	1660519 6510324	6058	0.014	-0.1030	No
48	PSPN	6130475	6132	0.014	-0.1065	No
49	HOXA9	610494 4730040 5130601	6215	0.013	-0.1104	No
50	SEMA3C	7000020	6245	0.013	-0.1115	No
51	GPR17	5890671	6295	0.013	-0.1137	No
52	HOXD11	2260242	6305	0.013	-0.1137	No
53	ZIC1	670113	6324	0.013	-0.1143	No
54	KLHL1	6350021	6344	0.012	-0.1148	No
55	NMU	6400025	6433	0.012	-0.1192	No
56	POU4F2	2120195 2570022	6435	0.012	-0.1188	No
57	GABRA1	130372	6457	0.012	-0.1195	No
58	POGZ	870348 7040286	6544	0.011	-0.1238	No
59	TEAD1	2470551	6738	0.010	-0.1339	No
60	GPM6A	1660044 2750152	6782	0.010	-0.1359	No
61	ASB4	2100064 3060059	6863	0.010	-0.1399	No
62	PFTK1	1780181	6876	0.009	-0.1402	No
63	HOXB8	3710450	6909	0.009	-0.1416	No
64	SIX1	6760471	7117	0.008	-0.1525	No
65	KLF15	4230164	7123	0.008	-0.1525	No
66	MEF2C	670025 780338	7171	0.008	-0.1547	No
67	OTX1	2510215	7185	0.008	-0.1551	No
68	GNB3	1230167	7194	0.008	-0.1553	No
69	NRXN1	460408 5340270 6370066	7238	0.008	-0.1573	No
70	SRPK2	6380341	7422	0.007	-0.1670	No
71	CDH6	4730541	7480	0.007	-0.1698	No
72	CASQ2	3170136	7559	0.007	-0.1738	No
73	TBX4	3060008	7671	0.006	-0.1796	No
74	ZRANB1	510373 4540278	7838	0.006	-0.1884	No
75	ATRX	2340039 3610132 4210373	7963	0.005	-0.1950	No
76	SP8	4060576	7993	0.005	-0.1963	No
77	SIX6	3140458	8015	0.005	-0.1973	No
78	C1QTNF7	2970619	8031	0.005	-0.1979	No
79	HOXC4	1940193	8098	0.005	-0.2013	No
80	HOXD3	6450154	8146	0.005	-0.2037	No
81	FLRT1	4540348	8451	0.004	-0.2201	No
82	HOXC5	1580017	8463	0.004	-0.2205	No
83	ITSN1	2640577	8599	0.003	-0.2277	No
84	CLMN	1340446 1660433 2940670	8638	0.003	-0.2297	No
85	OFCC1	2060392	8655	0.003	-0.2304	No
86	SDPR	3360292	8723	0.003	-0.2339	No
87	HOXD10	6100039	8737	0.003	-0.2345	No
88	MID1	4070114 4760458	8882	0.003	-0.2423	No
89	SLC2A12	50364	9012	0.002	-0.2492	No
90	NPPB	4150722	9104	0.002	-0.2541	No
91	CRISP1	50181	9192	0.002	-0.2587	No
92	CHES1	4570121 5700162	9295	0.001	-0.2642	No
93	CLDN8	1770113 2320500	9410	0.001	-0.2704	No
94	FGF7	5390484	9464	0.001	-0.2732	No
95	GALNT7	3990280	9669	0.000	-0.2843	No
96	CALN1	3610722	9683	0.000	-0.2850	No
97	NRP2	4070400 5860041 6650446	9922	-0.000	-0.2979	No
98	HOXB6	4210739	10097	-0.001	-0.3073	No
99	NRXN3	1400546 3360471	10155	-0.001	-0.3104	No
100	LRRC2	3130400	10265	-0.001	-0.3162	No
101	CD36	5890575	10486	-0.002	-0.3281	No
102	USH1G	2940446	10793	-0.003	-0.3446	No
103	GRB10	6980082	10821	-0.003	-0.3460	No
104	PVRL3	1400324 4200593 6650128	10830	-0.003	-0.3463	No
105	DRD5	2970133	10844	-0.003	-0.3469	No
106	TSC1	1850672	10975	-0.003	-0.3538	No
107	CDON	540204	11026	-0.004	-0.3564	No
108	OTOP2	610068	11056	-0.004	-0.3579	No
109	RIMS2	670725	11088	-0.004	-0.3594	No
110	SH3BP5	7100408	11138	-0.004	-0.3619	No
111	HOXA2	2120121	11144	-0.004	-0.3621	No
112	CLSTN2	6900546	11158	-0.004	-0.3626	No
113	GFRA3	6510609	11207	-0.004	-0.3651	No
114	POU3F2	6620484	11225	-0.004	-0.3658	No
115	DMD	1740041 3990332	11250	-0.004	-0.3670	No
116	ANKRD29	1450112	11255	-0.004	-0.3670	No
117	LHFP	3440368	11264	-0.004	-0.3673	No
118	TSGA10	450594 3130435 4920093	11342	-0.005	-0.3713	No
119	FGFR4	2650072	11343	-0.005	-0.3712	No
120	MSR1	940538	11469	-0.005	-0.3778	No
121	FGF14	2630390 3520075 6770048	11478	-0.005	-0.3780	No
122	WNT2	4610020	11616	-0.006	-0.3853	No
123	MAP2K1IP1	6110091	11673	-0.006	-0.3881	No
124	FGF20	5690601	11715	-0.006	-0.3901	No
125	BDNF	2940128 3520368	11795	-0.006	-0.3942	No
126	SIX3	3830402	11882	-0.007	-0.3986	No
127	RASGRF2	1990047	11904	-0.007	-0.3995	No
128	SLC6A5	870121	11971	-0.007	-0.4028	No
129	HOXA6	2340333	11974	-0.007	-0.4027	No
130	GDNF	4050487 5720739	12020	-0.007	-0.4048	No
131	DMBT1	7050270	12146	-0.008	-0.4114	No
132	ELAVL4	50735 3360086 5220167	12316	-0.009	-0.4202	No
133	PITX2	870537 2690139	12317	-0.009	-0.4199	No
134	HOXB9	2640687	12324	-0.009	-0.4199	No
135	CRYZL1	730022 2320044	12423	-0.009	-0.4249	No
136	SRC	580132	12478	-0.009	-0.4275	No
137	CHRDL1	1580037 6380204	12504	-0.009	-0.4285	No
138	GREM1	3940180	12578	-0.010	-0.4321	No
139	HOXB5	2900538	12615	-0.010	-0.4337	No
140	CRB1	3390670	12633	-0.010	-0.4343	No
141	CREB5	2320368	12683	-0.010	-0.4366	No
142	TRERF1	6370017 6940138	12707	-0.011	-0.4374	No
143	DSC1	6130400	12873	-0.011	-0.4460	No
144	COLEC12	2690717 4590086	12928	-0.012	-0.4485	No
145	RXRG	7040008	12942	-0.012	-0.4487	No
146	TCF21	2690446	13035	-0.013	-0.4533	No
147	LIF	1410373 2060129 3990338	13210	-0.014	-0.4622	No
148	HOXD9	2570181	13218	-0.014	-0.4621	No
149	HOXA5	6840026	13239	-0.014	-0.4627	No
150	SOX5	2370576 2900167 3190128 5050528	13250	-0.014	-0.4627	No
151	CHN1	6040441	13263	-0.014	-0.4628	No
152	SALL1	5420020 7050195	13700	-0.019	-0.4858	No
153	SP6	60484 510452 2690333	13718	-0.019	-0.4861	No
154	PAX2	6040270 7000133	13849	-0.021	-0.4924	No
155	FRMPD1	5420164	13897	-0.021	-0.4942	No
156	LSAMP	2810056 6550082	13949	-0.022	-0.4961	No
157	ALDH1A2	2320301	14146	-0.025	-0.5058	No
158	CTLA4	6590537	14189	-0.026	-0.5072	No
159	CDX2	3850349	14232	-0.027	-0.5085	No
160	ASCL3	4570484	14262	-0.027	-0.5091	No
161	AGR2	3990161	14372	-0.029	-0.5139	No
162	ROBO3	6550408	14499	-0.032	-0.5196	No
163	CD226	3390438	14651	-0.036	-0.5265	No
164	CACNA1E	840253	14677	-0.037	-0.5265	No
165	JMJD1C	940575 2120025	14762	-0.040	-0.5296	No
166	AGTR2	2450632	14781	-0.041	-0.5290	No
167	LDB2	5670441 6110170	14784	-0.041	-0.5276	No
168	GRIA3	2900164 6130278 6860154	14816	-0.043	-0.5278	No
169	XPR1	1500093	14868	-0.045	-0.5289	No
170	CRIM1	130491	14979	-0.051	-0.5330	No
171	HOXB7	4540706 4610358	15138	-0.060	-0.5394	No
172	ANXA2	3140402	15178	-0.063	-0.5392	No
173	DEPDC6	730326 5820239	15248	-0.068	-0.5405	No
174	ALX3	50497	15250	-0.068	-0.5380	No
175	GUCA1C	6130148	15342	-0.075	-0.5402	No
176	RNF111	2970072 3140112 5130647	15381	-0.079	-0.5394	No
177	IARS	460528 1580739 1690008	15604	-0.101	-0.5478	No
178	VAV3	1050731 2450242 2680653	15696	-0.110	-0.5488	No
179	FYN	2100468 4760520 4850687	15761	-0.116	-0.5480	No
180	KCNA3	510059	15805	-0.121	-0.5459	No
181	JAK1	5910746	15852	-0.127	-0.5438	No
182	HIVEP3	3990551	15947	-0.136	-0.5440	No
183	ZIC4	1500082	16025	-0.146	-0.5428	No
184	GOLGA1	5860471	16197	-0.171	-0.5459	No
185	SNCA	5340673	16223	-0.174	-0.5409	No
186	GPX2	6940619	16756	-0.282	-0.5595	Yes
187	ZHX2	2900452	16790	-0.289	-0.5508	Yes
188	SLC25A25	1230605	17012	-0.351	-0.5500	Yes
189	WASL	3290170	17129	-0.394	-0.5420	Yes
190	HNRPA0	2680048	17155	-0.401	-0.5287	Yes
191	PTEN	3390064	17161	-0.403	-0.5143	Yes
192	PHC2	1430433	17164	-0.403	-0.4998	Yes
193	CCNG2	3190095	17333	-0.468	-0.4918	Yes
194	PRKRIP1	4280746 6100390	17365	-0.480	-0.4760	Yes
195	SOX4	2260091	17671	-0.637	-0.4694	Yes
196	HOXA7	5910152	17724	-0.670	-0.4479	Yes
197	GEMIN4	130278 2230075	17789	-0.708	-0.4255	Yes
198	AGPAT4	6040079	18093	-0.980	-0.4063	Yes
199	CARD11	70338	18148	-1.044	-0.3712	Yes
200	MAP3K3	610685	18187	-1.104	-0.3331	Yes
201	GPR18	2640551	18361	-1.506	-0.2877	Yes
202	ARHGAP4	1940022	18372	-1.547	-0.2319	Yes
203	HIBADH	5550739	18436	-1.765	-0.1710	Yes
204	HBP1	2510102 3130010 4210619	18447	-1.783	-0.1067	Yes
205	RANGAP1	2320593 6650601	18583	-3.180	0.0018	Yes