Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos |
| Phenotype | phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos |
| Upregulated in class | normalThy |
| GeneSet | TSADAC_RKOSILENT_UP |
| Enrichment Score (ES) | -0.91663915 |
| Normalized Enrichment Score (NES) | -1.583713 |
| Nominal p-value | 0.0020283975 |
| FDR q-value | 0.37383196 |
| FWER p-Value | 0.915 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PTPRM | 6370136 | 4422 | 0.038 | -0.2324 | No | ||
| 2 | MCPH1 | 3130356 3850750 6220270 | 5850 | 0.016 | -0.3070 | No | ||
| 3 | PTGS2 | 2510301 3170369 | 6247 | 0.013 | -0.3265 | No | ||
| 4 | LAMA2 | 7040020 | 7539 | 0.007 | -0.3949 | No | ||
| 5 | LPHN2 | 4480010 | 8519 | 0.004 | -0.4471 | No | ||
| 6 | PCDH8 | 2360047 4200452 | 8829 | 0.003 | -0.4633 | No | ||
| 7 | FOLH1 | 3290300 | 9968 | -0.001 | -0.5244 | No | ||
| 8 | KYNU | 1410435 | 10354 | -0.002 | -0.5449 | No | ||
| 9 | SFRP1 | 6980315 | 13446 | -0.016 | -0.7089 | No | ||
| 10 | COL6A3 | 2640717 4070064 5390717 | 14167 | -0.026 | -0.7441 | No | ||
| 11 | CYP4B1 | 2570139 | 14689 | -0.038 | -0.7669 | No | ||
| 12 | LAMA3 | 1190131 5290239 | 15423 | -0.082 | -0.7950 | Yes | ||
| 13 | TIMP3 | 1450504 1980270 | 15603 | -0.101 | -0.7908 | Yes | ||
| 14 | TIMP2 | 4780609 | 15713 | -0.111 | -0.7813 | Yes | ||
| 15 | DNASE1L3 | 670086 | 18232 | -1.169 | -0.7554 | Yes | ||
| 16 | S100A10 | 6350010 | 18564 | -2.797 | -0.3877 | Yes | ||
| 17 | XCL1 | 3800504 | 18565 | -2.832 | 0.0027 | Yes |
