Details for gene set HYPOXIA

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	HYPOXIA_REVIEW
Enrichment Score (ES)	0.7399766
Normalized Enrichment Score (NES)	1.6059264
Nominal p-value	0.0
FDR q-value	0.07261767
FWER p-Value	0.581

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HMOX1	1740687	30	3.784	0.1118	Yes
2	PKM2	6520403 70500	50	3.279	0.2090	Yes
3	APEX1	3190519	66	3.039	0.2993	Yes
4	CDKN1A	4050088 6400706	188	2.027	0.3535	Yes
5	TFRC	4050551	244	1.692	0.4012	Yes
6	SPP1	2470609	262	1.645	0.4496	Yes
7	TGM2	5360452	323	1.483	0.4908	Yes
8	HK2	2640722	384	1.365	0.5285	Yes
9	IGF2	6510020	500	1.160	0.5570	Yes
10	ADM	4810121	545	1.100	0.5876	Yes
11	MIF	3710332	587	1.052	0.6169	Yes
12	ALDOA	6290672	716	0.911	0.6373	Yes
13	XRCC6	2850450 3870528	836	0.821	0.6555	Yes
14	PFKL	6200167	934	0.759	0.6730	Yes
15	LDHA	2190594	973	0.735	0.6930	Yes
16	COL5A1	2230050	1000	0.716	0.7131	Yes
17	ENO1	5340128	1113	0.649	0.7265	Yes
18	BHLHB2	7040603	1201	0.607	0.7400	Yes
19	BNIP3L	1940347	1699	0.404	0.7253	No
20	PRPS1	6350129	1900	0.346	0.7249	No
21	TGFB1	1940162	1905	0.345	0.7350	No
22	PLAUR	5910280	2078	0.298	0.7347	No
23	NFKB1	5420358	2177	0.270	0.7375	No
24	TGFB3	1070041	2515	0.200	0.7253	No
25	CDKN1B	3800025 6450044	2706	0.167	0.7201	No
26	STC1	360161	3185	0.109	0.6976	No
27	CCL2	4760019	4159	0.047	0.6465	No
28	MMP13	510471 3940097	4783	0.029	0.6138	No
29	PGK1	1570494 630300	5330	0.021	0.5850	No
30	HDAC9	1990010 2260133	5475	0.019	0.5778	No
31	TH	2100056	5768	0.017	0.5626	No
32	CP	2570484	6140	0.014	0.5430	No
33	FGF3	4230685	6238	0.013	0.5382	No
34	PTGS2	2510301 3170369	6247	0.013	0.5381	No
35	FLT1	3830167 4920438	6514	0.011	0.5241	No
36	EPO	940180	6911	0.009	0.5031	No
37	EDN2	6760647	7405	0.007	0.4767	No
38	IGFBP3	2370500	7467	0.007	0.4736	No
39	ENPEP	130373	8025	0.005	0.4437	No
40	PGF	4810593	8478	0.004	0.4195	No
41	TEK	6350541	8880	0.003	0.3979	No
42	F3	2940180	9039	0.002	0.3895	No
43	XRCC5	7100286	9130	0.002	0.3847	No
44	VIM	20431	9235	0.002	0.3791	No
45	BNIP3	3140270	9418	0.001	0.3694	No
46	EPAS1	5290156	9554	0.001	0.3621	No
47	HGF	3360593	9670	0.000	0.3559	No
48	IL6	380133	9755	0.000	0.3514	No
49	IGFBP1	5720435	10169	-0.001	0.3291	No
50	TAGLN	6660280	10929	-0.003	0.2883	No
51	ANGPT2	1230458 5720706 6040605	11202	-0.004	0.2738	No
52	SLC2A3	1990377	11375	-0.005	0.2647	No
53	JUN	840170	11404	-0.005	0.2633	No
54	EDN1	1770047	11775	-0.006	0.2435	No
55	TGFA	1570332	12184	-0.008	0.2218	No
56	GAPDH	110022 430039 6220161	12215	-0.008	0.2204	No
57	HIF1A	5670605	12286	-0.008	0.2169	No
58	IGFBP2	5220563	13443	-0.016	0.1550	No
59	L1CAM	4850021	13895	-0.021	0.1313	No
60	FOS	1850315	14022	-0.023	0.1252	No
61	LRP8	3610746 5360035	14178	-0.026	0.1177	No
62	HK1	4280402	15100	-0.058	0.0697	No
63	P4HA1	2630692	15161	-0.062	0.0684	No
64	PDGFB	3060440 6370008	15750	-0.115	0.0401	No
65	SAT1	4570463	15823	-0.124	0.0399	No
66	SLC2A1	2100609	16163	-0.166	0.0266	No
67	CCNG2	3190095	17333	-0.468	-0.0223	No
68	DDIT3	780373	17490	-0.535	-0.0147	No
69	TFF3	1580129	17973	-0.841	-0.0155	No
70	PFKP	70138 6760040 1170278	18405	-1.672	0.0114	No