Details for gene set BRENTANI_TRANSCRIPTION

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	BRENTANI_TRANSCRIPTION_FACTORS
Enrichment Score (ES)	-0.67151666
Normalized Enrichment Score (NES)	-1.5115081
Nominal p-value	0.016166281
FDR q-value	0.44303825
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	AATF	5220575	518	1.134	0.0158	No
2	LITAF	6940671	598	1.042	0.0517	No
3	MAFG	4120440	814	0.833	0.0722	No
4	NME1	770014	1159	0.629	0.0780	No
5	STAT5A	2680458	1375	0.523	0.0865	No
6	SPI1	1410397	1873	0.353	0.0734	No
7	MYBL2	5220609 6520368	2253	0.253	0.0627	No
8	ETS1	5270278 6450717 6620465	3268	0.100	0.0119	No
9	PML	50093 2190435 2450402 3840082	3377	0.092	0.0097	No
10	CEBPA	5690519	3602	0.076	0.0005	No
11	EGR3	6940128	3745	0.067	-0.0045	No
12	MYC	380541 4670170	4075	0.051	-0.0203	No
13	WT1	3990463	4204	0.046	-0.0254	No
14	ETV1	70735 2940603 5080463	5007	0.026	-0.0677	No
15	GLI2	3060632	5212	0.022	-0.0778	No
16	FOSL2	870044 1230427 6520433	5454	0.020	-0.0900	No
17	ATF1	4570142 5550095	5748	0.017	-0.1052	No
18	FOXD1	6860053	7059	0.009	-0.1754	No
19	PBX1	6660301	7635	0.007	-0.2062	No
20	TLX1	2630162	7776	0.006	-0.2135	No
21	GLI3	5690148	8188	0.005	-0.2354	No
22	CHES1	4570121 5700162	9295	0.001	-0.2950	No
23	DPF2	6980373	9631	0.001	-0.3130	No
24	PAX7	6860593	9812	-0.000	-0.3227	No
25	EHF	4560088	10719	-0.003	-0.3714	No
26	LMO1	3170528	10730	-0.003	-0.3719	No
27	CBFB	1850551 2650035	10875	-0.003	-0.3795	No
28	JUN	840170	11404	-0.005	-0.4078	No
29	PPARA	2060026	11546	-0.005	-0.4152	No
30	RXRA	3800471	11617	-0.006	-0.4187	No
31	MYBL1	2900168	12007	-0.007	-0.4394	No
32	MLLT7	4480707	12258	-0.008	-0.4526	No
33	FOSL1	430021	12472	-0.009	-0.4637	No
34	AHR	4560671	12618	-0.010	-0.4711	No
35	MYOD1	1230731	12744	-0.011	-0.4774	No
36	FOSB	1940142	12947	-0.012	-0.4878	No
37	REL	360707	13310	-0.015	-0.5068	No
38	STAT6	1190010 5720019	13858	-0.021	-0.5355	No
39	FOS	1850315	14022	-0.023	-0.5433	No
40	STAT5B	6200026	14943	-0.049	-0.5910	No
41	FOXD2	4210035	15489	-0.088	-0.6170	No
42	TCF7L2	2190348 5220113	15650	-0.105	-0.6216	No
43	ETV6	610524	16017	-0.145	-0.6357	No
44	ETV3	5360487	16114	-0.160	-0.6347	No
45	FLI1	3990142	16745	-0.280	-0.6579	Yes
46	IRF4	610133	16775	-0.287	-0.6484	Yes
47	RELB	1400048	17205	-0.414	-0.6555	Yes
48	NFKB2	2320670	17315	-0.460	-0.6437	Yes
49	RELA	3830075	17328	-0.467	-0.6263	Yes
50	MYB	1660494 5860451 6130706	17450	-0.518	-0.6129	Yes
51	RUNX1	3840711	17835	-0.736	-0.6052	Yes
52	JUNB	4230048	17941	-0.818	-0.5793	Yes
53	SMARCA4	6980528	17966	-0.837	-0.5484	Yes
54	STAT3	460040 3710341	18021	-0.893	-0.5169	Yes
55	PBX2	3130433 6510292	18485	-2.018	-0.4640	Yes
56	ETS2	360451	18501	-2.149	-0.3820	Yes
57	BCL6	940100	18572	-2.937	-0.2725	Yes
58	SRF	70139 2320039	18588	-3.326	-0.1451	Yes
59	EGR1	4610347	18604	-3.801	0.0006	Yes