Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_C
Enrichment Score (ES)	-0.38145533
Normalized Enrichment Score (NES)	-1.2624958
Nominal p-value	0.08300395
FDR q-value	0.66639215
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	69	2.573	0.0465	No
2	COL8A1	1418440_at 1418441_at 1442794_at 1447819_x_at 1455627_at	126	2.039	0.0833	No
3	CRK	1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at	136	1.966	0.1209	No
4	YWHAZ	1416102_at 1416103_at 1436971_x_at 1436981_a_at 1439005_x_at 1443893_at 1448218_s_at 1448219_a_at	166	1.879	0.1559	No
5	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	215	1.670	0.1859	No
6	MATR3	1434888_a_at 1438368_a_at 1441272_at 1450874_at 1458508_at	360	1.291	0.2042	No
7	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	406	1.206	0.2254	No
8	CTNND1	1422450_at 1437448_s_at 1445830_at	410	1.195	0.2484	No
9	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	815	0.649	0.2424	No
10	DUSP10	1417163_at 1417164_at	951	0.564	0.2470	No
11	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	989	0.542	0.2558	No
12	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	1090	0.494	0.2608	No
13	LDB3	1416752_at 1433783_at 1451999_at	1139	0.474	0.2677	No
14	VCL	1416156_at 1416157_at 1445256_at	1169	0.463	0.2753	No
15	ROCK2	1423592_at 1451041_at	1233	0.440	0.2809	No
16	EML4	1429612_at 1447838_x_at	1666	0.320	0.2673	No
17	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	1682	0.316	0.2727	No
18	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	1732	0.307	0.2764	No
19	HOXA3	1427433_s_at 1441070_at 1452421_at	1777	0.299	0.2801	No
20	BCAS3	1423528_at 1428454_at 1457817_at 1458557_at	1900	0.277	0.2799	No
21	TADA3L	1417467_a_at 1448719_at	2121	0.245	0.2745	No
22	SCOC	1416267_at 1430999_a_at	2442	0.207	0.2638	No
23	RASD2	1427343_at 1427344_s_at 1458433_at	2583	0.193	0.2611	No
24	POU3F4	1422164_at 1422165_at	2811	0.174	0.2540	No
25	PDLIM7	1417959_at 1428319_at 1443785_x_at	3085	0.156	0.2445	No
26	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	3109	0.155	0.2464	No
27	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	3155	0.152	0.2473	No
28	RHOJ	1418892_at 1444982_at	3405	0.140	0.2385	No
29	EMILIN2	1435264_at	3491	0.136	0.2373	No
30	CFL2	1418066_at 1418067_at 1431432_at	3926	0.118	0.2196	No
31	RRM1	1415878_at 1440073_at 1448127_at	4313	0.105	0.2039	No
32	TANK	1421640_a_at 1441513_at 1459668_at	4505	0.100	0.1971	No
33	DVL3	1420457_at	4771	0.093	0.1867	No
34	PDLIM4	1417928_at	4829	0.091	0.1858	No
35	TGFB1I1	1418136_at	4851	0.090	0.1866	No
36	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	5359	0.079	0.1648	No
37	PPP2R3A	1455198_a_at	5439	0.077	0.1627	No
38	AOC3	1449396_at	5508	0.076	0.1610	No
39	SRF	1418255_s_at 1418256_at	5837	0.069	0.1473	No
40	SSH3	1447929_at	6013	0.066	0.1405	No
41	ITGB1BP2	1423238_at	6109	0.064	0.1374	No
42	CKM	1417614_at	6219	0.062	0.1336	No
43	GGN	1445278_at	6487	0.057	0.1224	No
44	ITGB6	1422983_at 1432281_a_at	7245	0.044	0.0885	No
45	NR2F1	1418157_at 1422412_x_at	7328	0.043	0.0855	No
46	HOXB5	1418415_at	7407	0.042	0.0828	No
47	SRD5A2	1422960_at	7414	0.042	0.0833	No
48	MCAM	1416357_a_at	7419	0.041	0.0839	No
49	DSTN	1417124_at	7489	0.040	0.0815	No
50	PRKAB2	1435874_at 1435875_at 1442001_at	7929	0.034	0.0620	No
51	EFHD1	1448507_at	7995	0.033	0.0596	No
52	MYL9	1452670_at	8342	0.028	0.0443	No
53	AAK1	1420026_at 1435038_s_at 1441782_at	8560	0.025	0.0348	No
54	MYLK	1425504_at 1425505_at 1425506_at	8585	0.024	0.0342	No
55	KCTD15	1435339_at	8838	0.021	0.0230	No
56	MRVI1	1422245_a_at 1459665_s_at	9005	0.019	0.0157	No
57	STARD13	1452604_at	9757	0.009	-0.0186	No
58	EGR4	1449977_at	10188	0.003	-0.0383	No
59	TAGLN	1423505_at	10190	0.003	-0.0383	No
60	MYH11	1418122_at 1448962_at	10443	-0.000	-0.0499	No
61	ASB2	1428444_at 1436259_at	10463	-0.001	-0.0507	No
62	PLN	1423359_at 1450952_at 1460332_at	10570	-0.002	-0.0556	No
63	MRGPRF	1425894_at	10659	-0.003	-0.0596	No
64	RNF39	1440912_at 1441793_at	10667	-0.003	-0.0598	No
65	KCNMB1	1421400_at 1421401_at	10694	-0.004	-0.0609	No
66	IGF2AS	1427394_at	10701	-0.004	-0.0611	No
67	MUS81	1431885_a_at 1450432_s_at	10717	-0.004	-0.0618	No
68	TRIM46	1460568_at	10795	-0.005	-0.0652	No
69	ABL1	1423999_at 1441291_at 1444134_at 1445153_at	10904	-0.007	-0.0700	No
70	TNNC1	1418370_at	10957	-0.007	-0.0723	No
71	TCF2	1421224_a_at 1441484_at 1451687_a_at	11043	-0.008	-0.0760	No
72	FHL2	1419184_a_at	11062	-0.009	-0.0767	No
73	KCNK3	1425341_at 1425342_a_at 1426058_a_at	11149	-0.010	-0.0804	No
74	MITF	1422025_at 1455214_at	11169	-0.010	-0.0811	No
75	LIN28	1437752_at	11641	-0.016	-0.1025	No
76	NKX6-2	1427420_at	11977	-0.020	-0.1175	No
77	PLCB3	1448661_at	12112	-0.022	-0.1232	No
78	DAPK3	1423446_at 1456496_at	12342	-0.025	-0.1332	No
79	AKAP12	1419706_a_at 1458235_at	12408	-0.026	-0.1357	No
80	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	12414	-0.026	-0.1354	No
81	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	12457	-0.026	-0.1368	No
82	ASPA	1418472_at	12479	-0.027	-0.1373	No
83	TAZ	1416207_at 1453785_at	12561	-0.028	-0.1405	No
84	GFPT2	1418753_at	12730	-0.030	-0.1476	No
85	FGFRL1	1447878_s_at 1451912_a_at	12779	-0.031	-0.1492	No
86	NKX2-2	1421112_at	13191	-0.037	-0.1674	No
87	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	13364	-0.039	-0.1745	No
88	FOSL1	1417487_at 1417488_at	13371	-0.039	-0.1741	No
89	NPAS2	1421036_at 1421037_at	13539	-0.042	-0.1809	No
90	PFN1	1449018_at	13688	-0.044	-0.1869	No
91	FOSB	1422134_at	13754	-0.045	-0.1890	No
92	CNN1	1417917_at	13930	-0.048	-0.1961	No
93	PNKP	1416378_at	13952	-0.048	-0.1961	No
94	POPDC2	1417806_at	14057	-0.050	-0.1999	No
95	FOXE3	1422393_at	14182	-0.052	-0.2046	No
96	HOXD10	1418606_at	14797	-0.062	-0.2317	No
97	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	14844	-0.062	-0.2326	No
98	ACTR3	1426392_a_at 1434968_a_at 1452051_at	15065	-0.066	-0.2414	No
99	MYL7	1449071_at	15091	-0.066	-0.2413	No
100	KRTCAP2	1417058_a_at 1417059_at	15554	-0.074	-0.2611	No
101	MAP1A	1460566_at	15591	-0.075	-0.2613	No
102	PHF12	1434922_at 1453579_at	15961	-0.082	-0.2766	No
103	IL17B	1431693_a_at	15966	-0.082	-0.2752	No
104	MYO18B	1431813_at	16061	-0.084	-0.2779	No
105	DLL1	1419204_at	16377	-0.090	-0.2907	No
106	ARPC4	1423588_at 1423589_at	16406	-0.091	-0.2902	No
107	TUFT1	1416689_at 1444694_at	16470	-0.092	-0.2913	No
108	ITGA7	1418393_a_at	16528	-0.094	-0.2921	No
109	JPH2	1421453_at 1455404_at	16632	-0.096	-0.2950	No
110	LMCD1	1424596_s_at	16891	-0.102	-0.3049	No
111	DEFB129	1440957_at	16909	-0.102	-0.3037	No
112	MYL6	1435041_at	17083	-0.107	-0.3096	No
113	ACTG2	1422340_a_at	17319	-0.113	-0.3182	No
114	CFL1	1448346_at 1455138_x_at	17478	-0.118	-0.3232	No
115	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	17841	-0.128	-0.3373	No
116	RSU1	1419259_at	17922	-0.130	-0.3385	No
117	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	17936	-0.131	-0.3365	No
118	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	18033	-0.134	-0.3384	No
119	DUSP5	1437199_at	18110	-0.136	-0.3392	No
120	SLC2A4	1415958_at 1415959_at	18208	-0.139	-0.3410	No
121	OSM	1438767_at	18218	-0.139	-0.3387	No
122	HOXB4	1451761_at 1460379_at	18302	-0.142	-0.3398	No
123	DNAJB4	1431734_a_at 1439524_at 1443611_at 1451177_at	18429	-0.146	-0.3428	No
124	RAB30	1426452_a_at	18909	-0.165	-0.3616	No
125	SPAG7	1433940_at	18911	-0.166	-0.3584	No
126	GPR20	1440021_at	19172	-0.178	-0.3669	No
127	RUNDC1	1454829_at	19489	-0.196	-0.3777	Yes
128	ACTA1	1427735_a_at	19541	-0.199	-0.3762	Yes
129	TITF1	1422346_at	19593	-0.203	-0.3746	Yes
130	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	19661	-0.208	-0.3736	Yes
131	RBBP7	1415775_at 1456227_x_at	19737	-0.213	-0.3730	Yes
132	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	19756	-0.214	-0.3697	Yes
133	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	19842	-0.221	-0.3693	Yes
134	USP52	1426700_a_at	20034	-0.240	-0.3734	Yes
135	ARHGAP1	1424307_at 1451309_at	20039	-0.240	-0.3690	Yes
136	STAT5B	1422102_a_at 1422103_a_at	20068	-0.243	-0.3656	Yes
137	CAP1	1417461_at 1417462_at	20136	-0.252	-0.3638	Yes
138	EGR3	1421486_at 1436329_at	20255	-0.265	-0.3641	Yes
139	LCP1	1415983_at 1448160_at	20278	-0.267	-0.3599	Yes
140	GADD45G	1453851_a_at	20300	-0.269	-0.3557	Yes
141	HOXA5	1443803_x_at 1448926_at	20398	-0.283	-0.3547	Yes
142	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	20415	-0.285	-0.3499	Yes
143	GRK6	1437436_s_at 1450480_a_at 1451672_at	20477	-0.292	-0.3471	Yes
144	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	20502	-0.296	-0.3425	Yes
145	DMPK	1422989_a_at 1434944_at	20619	-0.316	-0.3417	Yes
146	SIPA1	1416206_at	20767	-0.340	-0.3419	Yes
147	ACTN1	1427385_s_at 1428585_at 1452415_at	20870	-0.366	-0.3395	Yes
148	UNC84B	1433832_at 1439238_at	20884	-0.370	-0.3329	Yes
149	FLNA	1426677_at	20973	-0.396	-0.3293	Yes
150	JUNB	1415899_at	21007	-0.408	-0.3230	Yes
151	DUSP2	1450698_at	21013	-0.410	-0.3153	Yes
152	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	21034	-0.419	-0.3081	Yes
153	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21043	-0.422	-0.3003	Yes
154	RASSF2	1428392_at 1444889_at	21144	-0.460	-0.2960	Yes
155	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	21187	-0.479	-0.2887	Yes
156	CNN2	1450981_at	21398	-0.633	-0.2861	Yes
157	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	21409	-0.646	-0.2741	Yes
158	IER2	1416442_at	21445	-0.675	-0.2627	Yes
159	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	21482	-0.716	-0.2505	Yes
160	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	21508	-0.746	-0.2372	Yes
161	FOS	1423100_at	21526	-0.766	-0.2232	Yes
162	DUSP6	1415834_at	21545	-0.791	-0.2088	Yes
163	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	21554	-0.797	-0.1937	Yes
164	NR4A1	1416505_at	21587	-0.852	-0.1787	Yes
165	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	21624	-0.911	-0.1628	Yes
166	EGR1	1417065_at	21702	-1.120	-0.1447	Yes
167	EGR2	1427682_a_at 1427683_at	21804	-1.550	-0.1194	Yes
168	COL1A2	1446326_at 1450857_a_at	21812	-1.580	-0.0892	Yes
169	SLC7A1	1421533_at 1454991_at 1454992_at	21885	-1.934	-0.0552	Yes
170	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	21919	-2.970	0.0007	Yes