Details for gene set V$NFY

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFY_01
Enrichment Score (ES)	-0.41868275
Normalized Enrichment Score (NES)	-1.3796809
Nominal p-value	0.020408163
FDR q-value	0.7235837
FWER p-Value	0.995

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ODF2	1426040_a_at 1435216_a_at 1439918_at 1444101_at 1454735_at	113	2.135	0.0368	No
2	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	147	1.927	0.0732	No
3	FUT8	1441015_at 1442483_at 1443656_at 1456367_at 1460319_at	159	1.890	0.1098	No
4	PDGFRB	1417148_at 1436970_a_at	297	1.455	0.1321	No
5	PCDH9	1439322_at 1442659_at 1444215_at 1444724_at 1445052_at 1445061_at 1457973_at	317	1.416	0.1591	No
6	RACGAP1	1421546_a_at 1441889_x_at 1451358_a_at	866	0.612	0.1459	No
7	HRBL	1425362_at 1437642_at 1441347_at	1031	0.521	0.1486	No
8	KIF23	1450827_at 1453748_a_at 1455990_at	1051	0.512	0.1578	No
9	IER5	1417612_at 1417613_at	1053	0.511	0.1678	No
10	SLC25A27	1431201_at 1440090_at 1454230_a_at 1458119_at	1213	0.448	0.1693	No
11	TAF15	1419846_at 1438130_at 1453504_at	1259	0.431	0.1757	No
12	HNRPR	1427129_a_at 1438807_at 1452030_a_at	1267	0.427	0.1838	No
13	ZFP36L2	1437626_at 1439054_at 1451034_at	1343	0.396	0.1881	No
14	ZFP91	1426326_at 1429615_at 1429616_at 1459444_at	1425	0.371	0.1917	No
15	GPC3	1443240_at 1446525_at 1450990_at	1488	0.355	0.1958	No
16	MIS12	1424717_at	1768	0.301	0.1889	No
17	CAT	1416429_a_at 1416430_at 1441413_at	1827	0.289	0.1920	No
18	FA2H	1426960_a_at 1458424_at	1897	0.277	0.1942	No
19	JMJD1A	1426810_at	1934	0.270	0.1979	No
20	HIF1A	1427418_a_at 1431981_at 1448183_a_at 1457231_at	1969	0.265	0.2015	No
21	HES1	1418102_at	2007	0.260	0.2049	No
22	PPP1R7	1417919_at 1448888_at	2017	0.259	0.2096	No
23	LDB2	1421101_a_at 1439557_s_at 1445126_at 1456786_at	2059	0.252	0.2127	No
24	PPP2R5C	1425542_a_at 1425725_s_at 1425726_x_at 1427003_at 1434205_at 1434206_s_at 1444828_at	2176	0.239	0.2120	No
25	MLL5	1427236_a_at 1432601_at 1434704_at 1439107_a_at 1439108_at	2613	0.190	0.1957	No
26	PPM2C	1434228_at 1438201_at	2630	0.188	0.1987	No
27	NUMBL	1416491_at	2798	0.175	0.1945	No
28	ALS2CR13	1434010_at 1444629_at 1446891_at	2844	0.172	0.1958	No
29	SLIT3	1427086_at 1452296_at	2912	0.167	0.1960	No
30	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	2948	0.165	0.1976	No
31	CABC1	1417066_at 1417067_s_at	3009	0.161	0.1980	No
32	CLTA	1421062_s_at 1434540_a_at 1444328_at	3063	0.157	0.1987	No
33	COL5A3	1419703_at 1425984_at	3415	0.139	0.1853	No
34	SLC25A13	1449481_at	3743	0.125	0.1727	No
35	M6PR	1416385_a_at 1416386_a_at	4032	0.115	0.1617	No
36	MYOCD	1425808_a_at 1425978_at	4463	0.101	0.1439	No
37	LHX5	1420348_at	4476	0.100	0.1453	No
38	NUMB	1416891_at 1425368_a_at 1444337_at 1457175_at	4502	0.100	0.1462	No
39	SERPINA6	1448506_at	4699	0.094	0.1390	No
40	DDR2	1422738_at 1455688_at	5000	0.087	0.1269	No
41	SC5DL	1424709_at 1434520_at 1451457_at	5129	0.084	0.1227	No
42	CALM2	1422414_a_at 1423807_a_at	5336	0.080	0.1148	No
43	ZNF385	1418865_at	5377	0.079	0.1145	No
44	MOBK1B	1423782_at 1424484_at	5393	0.078	0.1153	No
45	PLK1	1443408_at 1448191_at 1459616_at	5709	0.072	0.1023	No
46	HOXC4	1422870_at	5840	0.069	0.0977	No
47	ACACA	1444810_at	6006	0.066	0.0914	No
48	PIK3R3	1445097_at 1447068_at 1456482_at	6062	0.065	0.0901	No
49	CCNA1	1449177_at	6136	0.064	0.0880	No
50	PAX3	1420389_at 1430335_a_at 1441743_at 1459148_at	6646	0.054	0.0657	No
51	ISL1	1422720_at 1450723_at	6725	0.053	0.0631	No
52	PPP2R1A	1415819_a_at 1438174_x_at 1438383_x_at 1438991_x_at 1455929_x_at	7200	0.045	0.0422	No
53	SYCP3	1435870_at 1449534_at	7439	0.041	0.0321	No
54	TLE4	1425650_at 1430384_at 1450853_at	7445	0.041	0.0327	No
55	XPO1	1418442_at 1418443_at 1448070_at	7471	0.041	0.0323	No
56	DSTN	1417124_at	7489	0.040	0.0323	No
57	PRCP	1431361_at 1444419_at 1452190_at 1452191_at	7801	0.036	0.0188	No
58	AGPAT1	1421024_at 1421025_at	7844	0.035	0.0175	No
59	COL1A1	1423669_at 1455494_at	8317	0.028	-0.0036	No
60	SFRP1	1416594_at 1428136_at 1438620_x_at 1448395_at 1460187_at	8491	0.026	-0.0111	No
61	NPTX2	1420720_at 1449960_at	8528	0.025	-0.0122	No
62	GUCA2A	1416905_at	8529	0.025	-0.0117	No
63	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	8726	0.022	-0.0203	No
64	TXNIP	1415996_at 1415997_at	8994	0.019	-0.0322	No
65	NOL5A	1426533_at 1455035_s_at	9040	0.018	-0.0339	No
66	TDO2	1419093_at 1449337_at	9057	0.018	-0.0343	No
67	PTCH2	1422655_at	9643	0.010	-0.0610	No
68	NFATC4	1423380_s_at 1432821_at 1454369_a_at	9710	0.009	-0.0638	No
69	FGF20	1421677_at	9766	0.008	-0.0662	No
70	HSPA1L	1419625_at 1440450_at	9804	0.008	-0.0677	No
71	HMGA2	1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at	9983	0.006	-0.0758	No
72	CDH6	1450288_at	10113	0.004	-0.0817	No
73	SIX2	1427436_at	10118	0.004	-0.0818	No
74	INSM2	1422269_at	10120	0.004	-0.0817	No
75	GTF2I	1431675_a_at 1431676_x_at	10165	0.003	-0.0837	No
76	STMN1	1415849_s_at	10236	0.002	-0.0869	No
77	PTF1A	1419424_at	10290	0.002	-0.0893	No
78	CKS2	1417457_at 1417458_s_at	10369	0.000	-0.0929	No
79	GPR50	1450346_at	10429	-0.000	-0.0956	No
80	CDH1	1443509_at 1448261_at	10444	-0.000	-0.0962	No
81	GSK3B	1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at	10465	-0.001	-0.0971	No
82	CYP39A1	1418780_at	10781	-0.005	-0.1115	No
83	PLA2G3	1441247_at 1456231_at	11150	-0.010	-0.1282	No
84	MAZ	1427099_at	11563	-0.015	-0.1468	No
85	HSPA1A	1452388_at	11604	-0.016	-0.1484	No
86	ABAT	1433855_at	11697	-0.017	-0.1523	No
87	NFYA	1422082_a_at 1427808_at 1452560_a_at	11810	-0.018	-0.1571	No
88	NKX6-2	1427420_at	11977	-0.020	-0.1643	No
89	NOL4	1430189_at 1441447_at 1456387_at	12081	-0.021	-0.1686	No
90	WNT8B	1421439_at	12196	-0.023	-0.1734	No
91	CIT	1426028_a_at 1427669_a_at 1458276_x_at	12212	-0.023	-0.1736	No
92	ACR	1449895_at	12353	-0.025	-0.1796	No
93	DLX3	1422037_at 1450475_at	12601	-0.029	-0.1904	No
94	LHX1	1421951_at 1450428_at	12647	-0.029	-0.1918	No
95	SGOL2	1437370_at	12652	-0.029	-0.1915	No
96	GNAT1	1460212_at	12723	-0.030	-0.1941	No
97	OLIG2	1416232_at	12749	-0.031	-0.1946	No
98	PASK	1450993_at	12829	-0.032	-0.1976	No
99	USP21	1454034_a_at	12887	-0.033	-0.1996	No
100	NPHP4	1431329_at 1434024_at 1444639_at	13176	-0.037	-0.2121	No
101	NKX6-1	1425828_at	13267	-0.038	-0.2155	No
102	SOX2	1416967_at	13341	-0.039	-0.2181	No
103	ASB7	1435010_at 1438744_at 1446319_at 1450363_at	13733	-0.045	-0.2352	No
104	POU3F3	1422331_at 1435197_at	13842	-0.046	-0.2393	No
105	DLEU2	1427410_at 1427411_s_at 1456145_at	14368	-0.055	-0.2623	No
106	SHC3	1450326_at	14499	-0.057	-0.2672	No
107	LRRC20	1438422_at	14502	-0.057	-0.2661	No
108	DPF3	1441659_at 1442686_at 1450162_at	14613	-0.059	-0.2700	No
109	ELAC2	1419680_a_at 1428476_a_at 1428477_at	14901	-0.063	-0.2820	No
110	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	15268	-0.069	-0.2974	No
111	RNF5	1422888_at	15276	-0.069	-0.2964	No
112	KLF1	1418600_at	15707	-0.077	-0.3147	No
113	SESN2	1425139_at 1451599_at	15713	-0.077	-0.3134	No
114	HOXB13	1419576_at	15774	-0.078	-0.3146	No
115	WNT3	1450763_x_at	16270	-0.088	-0.3356	No
116	WBP2	1448121_at	16321	-0.089	-0.3362	No
117	ABCA7	1419238_at	16376	-0.090	-0.3369	No
118	DND1	1455367_at	16379	-0.090	-0.3352	No
119	ZBTB10	1458695_at	16475	-0.092	-0.3377	No
120	TM7SF2	1460684_at	16575	-0.095	-0.3404	No
121	PPP1R1B	1451331_at	16678	-0.097	-0.3432	No
122	DLX1	1449470_at	16705	-0.098	-0.3425	No
123	RHOB	1449110_at	16837	-0.101	-0.3465	No
124	KCNJ2	1450503_at	16932	-0.103	-0.3488	No
125	DDX4	1427242_at	17057	-0.107	-0.3524	No
126	NANS	1417773_at 1417774_at	17306	-0.113	-0.3616	No
127	TLX3	1450806_at	17490	-0.118	-0.3677	No
128	ABCF2	1423863_at	17576	-0.120	-0.3692	No
129	NCAM1	1421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at	17639	-0.122	-0.3697	No
130	PRDM5	1432057_a_at	17770	-0.126	-0.3732	No
131	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	18033	-0.134	-0.3826	No
132	CDC45L	1416575_at 1457838_at	18091	-0.136	-0.3825	No
133	CATSPER2	1425309_at 1445264_at	18230	-0.140	-0.3861	No
134	UFD1L	1418087_at 1432367_a_at	18298	-0.142	-0.3864	No
135	ING5	1431134_at 1436069_at 1442094_at 1454235_a_at	18311	-0.142	-0.3842	No
136	FDPS	1423418_at	18405	-0.146	-0.3856	No
137	WASF2	1438683_at	18588	-0.152	-0.3910	No
138	RPN2	1418896_a_at	18621	-0.154	-0.3894	No
139	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	18939	-0.167	-0.4007	No
140	BCAT2	1425764_a_at	19016	-0.170	-0.4008	No
141	LRP8	1421459_a_at 1440882_at 1442347_at	19149	-0.176	-0.4034	No
142	ACYP1	1421022_x_at 1439013_x_at 1450095_a_at	19158	-0.177	-0.4003	No
143	NUBP2	1416512_at 1459842_x_at	19215	-0.180	-0.3994	No
144	FADS1	1423680_at 1440444_at	19286	-0.184	-0.3990	No
145	CYP24A1	1418866_at 1418867_at	19716	-0.212	-0.4145	Yes
146	SREBF2	1426744_at 1452174_at	19767	-0.215	-0.4126	Yes
147	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	19842	-0.221	-0.4116	Yes
148	BAHD1	1433703_s_at	19968	-0.233	-0.4128	Yes
149	USP52	1426700_a_at	20034	-0.240	-0.4111	Yes
150	MKL1	1434900_at	20100	-0.247	-0.4092	Yes
151	DNAJB11	1423151_at	20139	-0.252	-0.4060	Yes
152	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	20293	-0.268	-0.4078	Yes
153	SMAD2	1420634_a_at 1458304_at	20370	-0.278	-0.4058	Yes
154	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	20415	-0.285	-0.4022	Yes
155	SIX1	1427277_at	20432	-0.287	-0.3973	Yes
156	ETV5	1420998_at 1428142_at 1450082_s_at	20451	-0.290	-0.3924	Yes
157	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	20521	-0.299	-0.3897	Yes
158	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	20547	-0.302	-0.3849	Yes
159	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	20654	-0.321	-0.3835	Yes
160	WDR23	1448418_s_at 1460189_at	20883	-0.370	-0.3867	Yes
161	NEUROG3	1422312_a_at 1432034_at	20919	-0.381	-0.3808	Yes
162	SLC20A1	1438824_at 1446441_at 1448568_a_at	20984	-0.399	-0.3759	Yes
163	HK2	1422612_at	21000	-0.405	-0.3686	Yes
164	JUNB	1415899_at	21007	-0.408	-0.3609	Yes
165	TACC3	1417450_a_at 1436872_at 1455834_x_at	21320	-0.566	-0.3641	Yes
166	CNN3	1426724_at 1436759_x_at 1436836_x_at 1438354_x_at 1455570_x_at 1456380_x_at	21466	-0.695	-0.3571	Yes
167	SELK	1423225_at 1447909_s_at 1447910_x_at	21487	-0.720	-0.3439	Yes
168	NARF	1425344_at 1451677_at 1451678_at	21535	-0.776	-0.3308	Yes
169	DUSP6	1415834_at	21545	-0.791	-0.3156	Yes
170	NEK2	1417299_at 1437579_at 1437580_s_at 1443999_at	21561	-0.803	-0.3005	Yes
171	BARHL1	1418811_at 1418812_a_at	21595	-0.864	-0.2851	Yes
172	ELMO1	1424523_at 1446610_at 1450208_a_at	21665	-1.016	-0.2683	Yes
173	PPM1A	1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at	21682	-1.067	-0.2480	Yes
174	PNRC1	1433668_at 1438524_x_at 1439513_at	21780	-1.414	-0.2247	Yes
175	TREX1	1450672_a_at 1459618_at	21813	-1.580	-0.1951	Yes
176	CDC25A	1417131_at 1417132_at 1445995_at	21900	-2.292	-0.1540	Yes
177	RHOF	1434794_at 1441510_at 1455902_x_at	21901	-2.305	-0.1086	Yes
178	H3F3B	1420376_a_at 1430357_at 1455725_a_at	21913	-2.628	-0.0575	Yes
179	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	21919	-2.970	0.0007	Yes