Details for gene set V$NFKAPPAB

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKAPPAB_01
Enrichment Score (ES)	-0.41311553
Normalized Enrichment Score (NES)	-1.3744501
Nominal p-value	0.024291499
FDR q-value	0.6712995
FWER p-Value	0.996

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TRIB2	1426640_s_at 1426641_at 1459852_x_at	2	5.413	0.0890	No
2	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	58	2.672	0.1305	No
3	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	192	1.767	0.1534	No
4	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	286	1.485	0.1736	No
5	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	307	1.436	0.1963	No
6	ZBTB11	1454826_at	533	0.952	0.2016	No
7	P2RY10	1452815_at	691	0.757	0.2069	No
8	HSD3B7	1416968_a_at 1442912_at	774	0.678	0.2143	No
9	OPCML	1435612_at 1442752_at 1457446_at 1458228_at	841	0.635	0.2217	No
10	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	989	0.542	0.2239	No
11	IER5	1417612_at 1417613_at	1053	0.511	0.2294	No
12	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	1067	0.504	0.2371	No
13	SP6	1427786_at 1427787_at 1437788_at 1442342_at	1237	0.439	0.2365	No
14	ZFP36L2	1437626_at 1439054_at 1451034_at	1343	0.396	0.2382	No
15	MOBKL2C	1440919_at 1459919_a_at	1459	0.362	0.2389	No
16	RAP2C	1428119_a_at 1437016_x_at 1460430_at	1511	0.351	0.2423	No
17	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	1821	0.290	0.2329	No
18	CHD6	1427384_at 1431047_at	1834	0.288	0.2371	No
19	BMP2K	1421103_at 1437419_at 1458370_at	1901	0.276	0.2386	No
20	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	2136	0.243	0.2318	No
21	KCNS3	1445519_at 1457799_at	2151	0.240	0.2352	No
22	ITGB4	1427387_a_at	2403	0.212	0.2271	No
23	IL2RA	1420691_at 1420692_at	2426	0.209	0.2295	No
24	ARPC2	1437148_at 1442295_at	2460	0.206	0.2314	No
25	PPARBP	1421906_at 1421907_at 1439408_a_at 1446250_at 1447450_at 1448708_at 1450402_at 1453972_x_at	2731	0.180	0.2220	No
26	COL11A2	1423578_at	2963	0.164	0.2140	No
27	FBXL12	1448420_a_at	3754	0.125	0.1798	No
28	CCL5	1418126_at	3811	0.123	0.1792	No
29	LAMA1	1418153_at	3879	0.120	0.1781	No
30	FUT7	1420756_at	3911	0.119	0.1786	No
31	IFNB1	1422305_at	4333	0.104	0.1610	No
32	CHX10	1419628_at	4392	0.103	0.1600	No
33	HOXB9	1452317_at	4585	0.098	0.1528	No
34	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	4623	0.097	0.1527	No
35	CLCN1	1427591_at 1448082_at	4656	0.096	0.1528	No
36	CTGF	1416953_at	4924	0.089	0.1420	No
37	SLC6A12	1449382_at	5163	0.083	0.1324	No
38	BCKDK	1443813_x_at 1460644_at	5414	0.078	0.1222	No
39	UACA	1452985_at	5454	0.077	0.1216	No
40	CYLD	1429617_at 1429618_at 1445213_at	5742	0.071	0.1096	No
41	NFKBIB	1421266_s_at 1446718_at	6000	0.066	0.0989	No
42	PLAU	1422138_at 1422139_at	6605	0.055	0.0720	No
43	IL1RAPL1	1445821_at 1458964_at	7191	0.045	0.0459	No
44	FGF1	1423136_at 1441042_at 1450869_at	7291	0.043	0.0420	No
45	PUNC	1423496_a_at 1439498_at 1444981_at	7676	0.038	0.0250	No
46	AGPAT1	1421024_at 1421025_at	7844	0.035	0.0179	No
47	FGF17	1421523_at 1456239_at	7874	0.035	0.0171	No
48	SEC14L2	1424530_at	8019	0.033	0.0110	No
49	KCNH3	1421619_at 1431690_at 1445805_x_at 1459107_at	8147	0.031	0.0057	No
50	CXCL5	1419728_at	8272	0.029	0.0005	No
51	IL23A	1419529_at	8590	0.024	-0.0137	No
52	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	8591	0.024	-0.0133	No
53	TSLP	1450004_at	8828	0.021	-0.0238	No
54	ARHGAP8	1451463_at	8846	0.021	-0.0243	No
55	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	8848	0.021	-0.0240	No
56	EIF5A	1437859_x_at 1451470_s_at	9520	0.012	-0.0546	No
57	ATOH1	1449822_at	9611	0.011	-0.0586	No
58	SAMSN1	1421457_a_at 1431539_at	9886	0.007	-0.0711	No
59	ACTN3	1418677_at	9890	0.007	-0.0711	No
60	CDK6	1435338_at 1440040_at 1455287_at 1460291_at	10467	-0.001	-0.0976	No
61	TRIM47	1426784_at	10654	-0.003	-0.1061	No
62	EDG5	1428176_at 1447880_x_at	10673	-0.003	-0.1068	No
63	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	10696	-0.004	-0.1078	No
64	RND1	1455197_at	10875	-0.006	-0.1159	No
65	SDC4	1417654_at 1448793_a_at	11024	-0.008	-0.1225	No
66	SLC12A2	1417622_at 1417623_at 1443332_at 1448780_at	11192	-0.010	-0.1301	No
67	BNC2	1438861_at 1440593_at 1459132_at	11214	-0.011	-0.1308	No
68	EGF	1418093_a_at	11481	-0.014	-0.1428	No
69	WNT10B	1426091_a_at	11487	-0.014	-0.1428	No
70	IL1A	1421473_at	11581	-0.015	-0.1469	No
71	RIN2	1426368_at 1441209_at 1442829_at	11632	-0.016	-0.1489	No
72	KRTAP13-1	1428007_at	11889	-0.019	-0.1604	No
73	SALL1	1450489_at	12002	-0.020	-0.1652	No
74	NOL4	1430189_at 1441447_at 1456387_at	12081	-0.021	-0.1684	No
75	CPD	1418018_at 1418019_at 1418020_s_at 1434547_at 1442212_at 1447392_s_at 1455009_at	12180	-0.023	-0.1725	No
76	TAL1	1449389_at	12321	-0.025	-0.1786	No
77	MAP3K8	1419208_at	12556	-0.028	-0.1889	No
78	TAZ	1416207_at 1453785_at	12561	-0.028	-0.1886	No
79	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	12605	-0.029	-0.1901	No
80	ZBTB5	1437484_at	12628	-0.029	-0.1906	No
81	BFSP1	1450571_a_at	12679	-0.030	-0.1924	No
82	COL16A1	1427986_a_at	12772	-0.031	-0.1962	No
83	C1QL1	1422777_at	12788	-0.031	-0.1963	No
84	SMOC1	1448321_at	12817	-0.031	-0.1971	No
85	GATA4	1418863_at 1418864_at 1441364_at	13034	-0.035	-0.2065	No
86	CXCL2	1449984_at	13143	-0.036	-0.2108	No
87	MSX1	1417127_at 1448601_s_at	13409	-0.040	-0.2224	No
88	CXCL11	1419697_at 1419698_at	13620	-0.043	-0.2313	No
89	PFN1	1449018_at	13688	-0.044	-0.2337	No
90	PRX	1423292_a_at	14041	-0.049	-0.2490	No
91	ALG6	1439007_at 1459337_at	14097	-0.050	-0.2507	No
92	BCL6B	1418421_at	14247	-0.053	-0.2567	No
93	HOXA11	1420414_at	14272	-0.053	-0.2570	No
94	GRIN2D	1421393_at	14774	-0.061	-0.2790	No
95	ASCL3	1420780_at	14794	-0.062	-0.2788	No
96	MAG	1460219_at	14803	-0.062	-0.2782	No
97	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	14844	-0.062	-0.2790	No
98	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	15031	-0.066	-0.2865	No
99	AGC1	1449827_at	15150	-0.067	-0.2908	No
100	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	15268	-0.069	-0.2950	No
101	UBD	1419762_at	15465	-0.073	-0.3029	No
102	WNT10A	1460657_at	15513	-0.074	-0.3038	No
103	GREM1	1425357_a_at	15536	-0.074	-0.3036	No
104	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	15580	-0.075	-0.3043	No
105	LIG1	1416641_at	15681	-0.077	-0.3077	No
106	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	15698	-0.077	-0.3071	No
107	SESN2	1425139_at 1451599_at	15713	-0.077	-0.3065	No
108	GNG4	1417943_at 1417944_at 1447669_s_at	15800	-0.079	-0.3092	No
109	FLRT1	1443143_at	16029	-0.083	-0.3183	No
110	TLX1	1450526_at	16035	-0.083	-0.3172	No
111	IL1RN	1423017_a_at 1425663_at 1451798_at	16076	-0.084	-0.3176	No
112	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	16135	-0.085	-0.3189	No
113	NFKB2	1425902_a_at 1429128_x_at	16213	-0.087	-0.3210	No
114	MADCAM1	1425253_a_at	16348	-0.090	-0.3257	No
115	ABHD8	1416863_at	16602	-0.095	-0.3358	No
116	STC2	1419503_at 1445186_at 1449484_at	16926	-0.103	-0.3489	No
117	MSC	1418417_at	16998	-0.105	-0.3505	No
118	DAP3	1450848_at	17028	-0.106	-0.3500	No
119	STAT6	1421708_a_at 1426353_at	17159	-0.109	-0.3542	No
120	FKHL18	1437820_at	17185	-0.110	-0.3536	No
121	BAI2	1435558_at	17356	-0.114	-0.3595	No
122	MAML2	1446570_at 1447546_s_at	17423	-0.116	-0.3606	No
123	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	17428	-0.116	-0.3589	No
124	CXCL9	1418652_at 1456907_at	17443	-0.117	-0.3576	No
125	BLR1	1422003_at	17551	-0.120	-0.3606	No
126	KLK9	1431681_at	17832	-0.128	-0.3713	No
127	RRAS	1418448_at	17876	-0.129	-0.3712	No
128	IL13	1420802_at	17902	-0.130	-0.3702	No
129	CXCL10	1418930_at	17919	-0.130	-0.3688	No
130	RALGDS	1460634_at	17946	-0.131	-0.3678	No
131	HIVEP1	1422742_at	18024	-0.134	-0.3692	No
132	RPS6KA4	1438243_at 1448498_at	18177	-0.138	-0.3739	No
133	TNIP1	1427689_a_at	18199	-0.139	-0.3726	No
134	MAP4K2	1428297_at 1434833_at 1450244_a_at	18294	-0.142	-0.3745	No
135	C1ORF24	1422567_at 1454942_at	18320	-0.143	-0.3734	No
136	EDN2	1449161_at	18341	-0.143	-0.3719	No
137	TNF	1419607_at	18434	-0.146	-0.3737	No
138	FOXJ2	1420373_at 1420374_at	18569	-0.152	-0.3774	No
139	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	18707	-0.157	-0.3811	No
140	SLAMF8	1425294_at	18856	-0.164	-0.3852	No
141	TCEA2	1418107_at 1440791_x_at	19265	-0.183	-0.4010	No
142	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	19293	-0.185	-0.3992	No
143	KCNN3	1421632_at 1459308_at	19418	-0.191	-0.4017	No
144	UBE4B	1432499_a_at 1444465_at 1448410_at	19458	-0.194	-0.4003	No
145	SHOX2	1420559_a_at 1438042_at	19595	-0.203	-0.4032	No
146	GRK5	1446361_at 1446998_at 1449514_at	19607	-0.203	-0.4004	No
147	TRAF4	1416571_at 1460642_at	19630	-0.206	-0.3980	No
148	EBI3	1449222_at	19638	-0.206	-0.3950	No
149	USP52	1426700_a_at	20034	-0.240	-0.4092	Yes
150	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	20040	-0.240	-0.4054	Yes
151	NTN1	1422987_at 1454974_at	20075	-0.244	-0.4030	Yes
152	LRCH1	1438032_at 1442502_at 1442757_at 1445396_at 1447746_at 1459150_at	20164	-0.255	-0.4028	Yes
153	CHD4	1436343_at 1438476_a_at 1451295_a_at	20223	-0.261	-0.4012	Yes
154	ZBTB9	1429125_at	20433	-0.287	-0.4061	Yes
155	TNFSF7	1449926_at	20459	-0.290	-0.4025	Yes
156	LTB	1419135_at	20536	-0.301	-0.4010	Yes
157	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	20547	-0.302	-0.3965	Yes
158	ICAM1	1424067_at	20589	-0.311	-0.3933	Yes
159	HCST	1419119_at	20631	-0.317	-0.3899	Yes
160	LTA	1420353_at	20762	-0.339	-0.3903	Yes
161	ACTN1	1427385_s_at 1428585_at 1452415_at	20870	-0.366	-0.3892	Yes
162	UNC84B	1433832_at 1439238_at	20884	-0.370	-0.3837	Yes
163	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	20995	-0.402	-0.3822	Yes
164	IRF1	1448436_a_at	20997	-0.403	-0.3756	Yes
165	IL4I1	1419192_at	21061	-0.427	-0.3714	Yes
166	ENO3	1417951_at 1449631_at	21167	-0.468	-0.3685	Yes
167	ZMYND15	1438498_at	21193	-0.481	-0.3618	Yes
168	GADD45B	1420197_at 1449773_s_at 1450971_at	21244	-0.512	-0.3556	Yes
169	GNAO1	1421152_a_at 1448031_at 1460383_at	21269	-0.528	-0.3480	Yes
170	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	21296	-0.547	-0.3402	Yes
171	TNFRSF1B	1418099_at 1448951_at	21297	-0.550	-0.3312	Yes
172	BDNF	1422168_a_at 1422169_a_at	21318	-0.564	-0.3228	Yes
173	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	21378	-0.616	-0.3154	Yes
174	RIMS2	1422809_at 1432102_at 1436470_at 1443215_at 1450761_s_at	21385	-0.621	-0.3054	Yes
175	MSN	1421814_at 1450379_at	21392	-0.627	-0.2954	Yes
176	RELB	1417856_at	21402	-0.637	-0.2853	Yes
177	CD83	1416111_at	21414	-0.651	-0.2751	Yes
178	IL27RA	1449508_at	21476	-0.706	-0.2663	Yes
179	BCL3	1418133_at	21503	-0.742	-0.2553	Yes
180	SLC11A2	1417584_at 1426441_at 1441709_at 1447333_at 1452078_a_at	21575	-0.827	-0.2449	Yes
181	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	21690	-1.083	-0.2323	Yes
182	BMF	1422995_at 1454880_s_at 1458325_x_at	21713	-1.175	-0.2140	Yes
183	MMP9	1416298_at 1448291_at	21774	-1.396	-0.1938	Yes
184	BIRC3	1421392_a_at 1425223_at	21827	-1.626	-0.1694	Yes
185	JAK3	1425750_a_at 1446515_at	21863	-1.749	-0.1422	Yes
186	CXCL16	1418718_at 1449195_s_at	21890	-2.020	-0.1102	Yes
187	HCFC1	1421972_s_at 1433736_at 1445688_at 1446868_at 1450439_at 1457875_at	21891	-2.035	-0.0767	Yes
188	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21895	-2.100	-0.0422	Yes
189	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	21915	-2.671	0.0009	Yes