Details for gene set V$E2F_Q4

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	BT_ATM_minus
GeneSet	V$E2F_Q4_01
Enrichment Score (ES)	0.52912736
Normalized Enrichment Score (NES)	1.5336163
Nominal p-value	0.006887052
FDR q-value	0.22024262
FWER p-Value	0.95

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NUTF2	1434367_s_at 1447440_at 1449017_at	1	5.678	0.0877	Yes
2	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	26	3.426	0.1396	Yes
3	ANP32E	1420592_a_at 1447680_at	32	3.091	0.1872	Yes
4	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	49	2.748	0.2289	Yes
5	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	54	2.704	0.2705	Yes
6	DLST	1423710_at 1430161_at 1431011_at 1437775_at	110	2.162	0.3014	Yes
7	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	141	1.949	0.3302	Yes
8	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	146	1.935	0.3599	Yes
9	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	204	1.726	0.3840	Yes
10	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	210	1.684	0.4098	Yes
11	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	215	1.670	0.4354	Yes
12	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	368	1.284	0.4483	Yes
13	RFC1	1418342_at 1449050_at 1451920_a_at	436	1.145	0.4629	Yes
14	ERG	1425370_a_at 1440244_at	631	0.826	0.4668	Yes
15	PLK4	1419838_s_at 1426580_at 1452115_a_at	700	0.747	0.4752	Yes
16	FBXO5	1429499_at	768	0.683	0.4827	Yes
17	OSBPL7	1428893_at 1459966_at	925	0.577	0.4844	Yes
18	H2AFZ	1441370_at	992	0.541	0.4898	Yes
19	HRBL	1425362_at 1437642_at 1441347_at	1031	0.521	0.4961	Yes
20	STAG2	1421849_at 1450396_at	1081	0.498	0.5015	Yes
21	KNTC1	1435575_at	1115	0.486	0.5075	Yes
22	SFMBT1	1422893_at 1422894_at 1443853_x_at	1181	0.460	0.5116	Yes
23	TOPBP1	1452241_at 1458480_at	1345	0.396	0.5103	Yes
24	PRIM1	1418369_at 1444544_at 1449061_a_at	1460	0.362	0.5106	Yes
25	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	1490	0.355	0.5148	Yes
26	HNRPD	1425142_a_at 1446083_at	1547	0.345	0.5175	Yes
27	HOXA9	1421579_at 1455626_at	1754	0.303	0.5128	Yes
28	PRKDC	1451576_at	1820	0.291	0.5143	Yes
29	ACBD6	1452601_a_at 1453199_at	1847	0.285	0.5175	Yes
30	ORC1L	1422663_at 1443172_at	1929	0.271	0.5179	Yes
31	JMJD1A	1426810_at	1934	0.270	0.5219	Yes
32	JPH1	1421520_at 1438428_at	1950	0.268	0.5254	Yes
33	MCM6	1416251_at 1438852_x_at 1447756_x_at	1959	0.267	0.5291	Yes
34	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2058	0.252	0.5285	No
35	ARHGAP11A	1438434_at	2174	0.239	0.5269	No
36	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2508	0.201	0.5147	No
37	SLC38A1	1415903_at 1454764_s_at	2749	0.179	0.5065	No
38	EPHB2	1425015_at 1425016_at 1442471_at 1445417_at 1454022_at	2975	0.163	0.4987	No
39	HMGA1	1416184_s_at	3099	0.155	0.4954	No
40	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	3154	0.152	0.4953	No
41	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	3247	0.148	0.4933	No
42	BRMS1L	1452850_s_at 1460443_at	3522	0.135	0.4828	No
43	DCK	1428838_a_at 1439012_a_at 1449176_a_at	4097	0.112	0.4582	No
44	MCM4	1416214_at 1436708_x_at	4469	0.100	0.4427	No
45	MXD3	1422970_at 1438847_at 1448878_at	4550	0.098	0.4405	No
46	PCNA	1417947_at	4721	0.094	0.4342	No
47	MCM3	1420029_at 1426653_at	4751	0.093	0.4343	No
48	APRIN	1435242_at 1436161_at 1441553_at	4865	0.090	0.4305	No
49	SLC16A2	1418446_at	4884	0.090	0.4310	No
50	AXUD1	1434350_at	4890	0.090	0.4322	No
51	YBX2	1420762_a_at	5124	0.084	0.4228	No
52	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	5126	0.084	0.4240	No
53	NEGR1	1439303_at 1446279_at 1456392_at 1459126_at	5332	0.080	0.4159	No
54	E2F1	1417878_at 1431875_a_at 1447840_x_at	5785	0.070	0.3962	No
55	CTCF	1418330_at 1449042_at	5882	0.068	0.3928	No
56	PODN	1435180_at	5939	0.067	0.3913	No
57	NR3C2	1435991_at 1440306_at 1442533_at	5961	0.067	0.3914	No
58	MCM2	1434079_s_at 1448777_at	5983	0.066	0.3914	No
59	PIK3R3	1445097_at 1447068_at 1456482_at	6062	0.065	0.3888	No
60	PPP1R9B	1447247_at 1447486_at	6657	0.054	0.3624	No
61	BMP7	1418910_at 1432410_a_at	6752	0.052	0.3589	No
62	AP4M1	1418846_at	6784	0.052	0.3583	No
63	SLBP	1430058_at 1460168_at	7117	0.046	0.3437	No
64	ATP5G2	1415980_at 1456128_at	7170	0.045	0.3420	No
65	DMRT1	1423582_at	7300	0.043	0.3368	No
66	UNG	1425753_a_at	7458	0.041	0.3302	No
67	RCOR2	1417302_at	7486	0.040	0.3296	No
68	NDUFA11	1429708_at 1444154_at	7964	0.033	0.3082	No
69	ADAMTS2	1435990_at 1455720_at 1457058_at	8419	0.027	0.2877	No
70	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	8726	0.022	0.2740	No
71	MAP3K13	1430137_at 1440749_at 1447699_at	9429	0.013	0.2420	No
72	EIF5A	1437859_x_at 1451470_s_at	9520	0.012	0.2380	No
73	FANCC	1442265_at 1447632_at 1450861_at	9545	0.011	0.2371	No
74	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	9988	0.006	0.2169	No
75	PKMYT1	1418481_at 1438601_at	10064	0.004	0.2135	No
76	PTMA	1423455_at	10147	0.003	0.2098	No
77	WEE1	1416773_at 1416774_at	10211	0.003	0.2069	No
78	STMN1	1415849_s_at	10236	0.002	0.2058	No
79	PPM1D	1434142_at 1449092_at 1459069_at	10593	-0.002	0.1895	No
80	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	10696	-0.004	0.1849	No
81	IPO7	1442511_at 1454955_at 1458165_at	11201	-0.010	0.1619	No
82	MELK	1416558_at	11206	-0.011	0.1619	No
83	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	11344	-0.012	0.1558	No
84	SLC6A4	1417150_at	11357	-0.012	0.1554	No
85	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	11478	-0.014	0.1501	No
86	PCSK4	1425824_a_at	11524	-0.015	0.1483	No
87	CASP8AP2	1449217_at	11526	-0.015	0.1484	No
88	MAZ	1427099_at	11563	-0.015	0.1470	No
89	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	11574	-0.015	0.1468	No
90	RPS19	1449243_a_at 1460442_at	11847	-0.019	0.1346	No
91	SALL1	1450489_at	12002	-0.020	0.1278	No
92	UXT	1418986_a_at	12125	-0.022	0.1226	No
93	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	12291	-0.025	0.1154	No
94	FANCG	1420960_at	12323	-0.025	0.1143	No
95	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	12492	-0.027	0.1070	No
96	IMPDH2	1415851_a_at 1415852_at	12733	-0.030	0.0965	No
97	HMGN2	1433507_a_at	12840	-0.032	0.0921	No
98	DNAJC5G	1437814_at	12904	-0.033	0.0897	No
99	GLRA3	1450239_at	12948	-0.033	0.0882	No
100	PPP1R8	1424554_at 1435821_s_at	13014	-0.034	0.0858	No
101	EPHB1	1455188_at	13030	-0.034	0.0856	No
102	RAD51	1418281_at	13394	-0.040	0.0696	No
103	ATAD2	1436174_at 1443146_at 1443229_at	13783	-0.046	0.0524	No
104	BAI1	1455363_at	13790	-0.046	0.0529	No
105	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	13837	-0.046	0.0515	No
106	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	14155	-0.051	0.0377	No
107	USP2	1417168_a_at 1417169_at	14417	-0.056	0.0266	No
108	DAXX	1419026_at	14604	-0.059	0.0189	No
109	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	14677	-0.060	0.0166	No
110	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	14877	-0.063	0.0084	No
111	ARID4A	1436191_at 1438464_at 1456420_at	14958	-0.064	0.0057	No
112	RAB11B	1423448_at	14993	-0.065	0.0051	No
113	HOXC10	1439798_at	15057	-0.066	0.0033	No
114	IPO11	1428096_at 1429717_at	15142	-0.067	0.0004	No
115	PAQR4	1423101_at	15521	-0.074	-0.0158	No
116	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	15788	-0.079	-0.0268	No
117	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	16202	-0.086	-0.0444	No
118	GPS2	1417796_at	16282	-0.088	-0.0467	No
119	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	16565	-0.094	-0.0582	No
120	DCLRE1A	1417904_at 1432097_a_at 1442329_at	16731	-0.098	-0.0643	No
121	CDC6	1417019_a_at	16864	-0.101	-0.0688	No
122	TMEM15	1424366_at	16958	-0.104	-0.0714	No
123	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	17027	-0.106	-0.0729	No
124	KCNA6	1421568_at 1441049_at 1456954_at	17043	-0.106	-0.0720	No
125	KLF5	1430255_at 1451021_a_at 1451739_at	17128	-0.108	-0.0741	No
126	RANBP1	1422547_at	17317	-0.113	-0.0810	No
127	ZIM2	1432297_at	17376	-0.115	-0.0819	No
128	ABCF2	1423863_at	17576	-0.120	-0.0892	No
129	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	17935	-0.131	-0.1036	No
130	FBXO9	1417480_at 1432211_a_at	17993	-0.133	-0.1042	No
131	CDC45L	1416575_at 1457838_at	18091	-0.136	-0.1066	No
132	TNPO2	1425592_at 1425593_at 1437283_at	18101	-0.136	-0.1049	No
133	CASP2	1448165_at	18151	-0.137	-0.1050	No
134	UFD1L	1418087_at 1432367_a_at	18298	-0.142	-0.1095	No
135	UCHL1	1448260_at	18357	-0.144	-0.1099	No
136	E2F7	1437187_at	18552	-0.151	-0.1165	No
137	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	18647	-0.154	-0.1184	No
138	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	18706	-0.157	-0.1187	No
139	FMO4	1425799_at 1444852_at	18827	-0.162	-0.1217	No
140	GMNN	1417506_at	18961	-0.168	-0.1252	No
141	YWHAQ	1420828_s_at 1420829_a_at 1420830_x_at 1432842_s_at 1437608_x_at 1454378_at 1460590_s_at 1460621_x_at	18972	-0.168	-0.1231	No
142	ETV4	1423232_at 1443381_at	18982	-0.169	-0.1209	No
143	DDX17	1437773_x_at 1439037_at 1452155_a_at	19002	-0.170	-0.1191	No
144	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	19290	-0.184	-0.1295	No
145	DDB2	1425706_a_at 1436680_s_at	19294	-0.185	-0.1267	No
146	RNF121	1426503_a_at 1426504_a_at	19740	-0.214	-0.1439	No
147	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	19756	-0.214	-0.1413	No
148	GATA3	1448886_at	19920	-0.230	-0.1452	No
149	PPRC1	1426381_at	19981	-0.234	-0.1443	No
150	USP52	1426700_a_at	20034	-0.240	-0.1430	No
151	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	20073	-0.244	-0.1410	No
152	GPRC5B	1424613_at 1451411_at	20279	-0.267	-0.1463	No
153	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	20283	-0.268	-0.1423	No
154	MYC	1424942_a_at	20287	-0.268	-0.1383	No
155	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	20311	-0.271	-0.1351	No
156	PIK3R4	1460352_s_at	20450	-0.290	-0.1370	No
157	NCOA6	1423374_at	20483	-0.293	-0.1339	No
158	CDCA7	1428069_at 1445681_at	20603	-0.313	-0.1346	No
159	ID3	1416630_at	20719	-0.332	-0.1347	No
160	E2F3	1427462_at 1434564_at	20809	-0.350	-0.1334	No
161	EZH2	1416544_at 1444263_at	20951	-0.389	-0.1339	No
162	ZCCHC8	1423755_at 1441639_at	21242	-0.509	-0.1393	No
163	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	21554	-0.797	-0.1413	No
164	POLE2	1427094_at 1431440_at	21610	-0.889	-0.1301	No
165	POLA2	1425794_at 1448369_at 1456713_at	21701	-1.119	-0.1169	No
166	ERF	1422114_at 1435561_at	21763	-1.358	-0.0987	No
167	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	21768	-1.369	-0.0777	No
168	TIAM1	1418057_at 1444373_at 1453887_a_at	21816	-1.590	-0.0553	No
169	PHF15	1430081_at 1455345_at	21828	-1.631	-0.0306	No
170	CDC25A	1417131_at 1417132_at 1445995_at	21900	-2.292	0.0016	No