Details for gene set V$AP2ALPHA

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AP2ALPHA_01
Enrichment Score (ES)	-0.40966684
Normalized Enrichment Score (NES)	-1.3431125
Nominal p-value	0.026717557
FDR q-value	0.689427
FWER p-Value	0.998

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PHC2	1416048_at 1437239_x_at 1439639_at	31	3.111	0.0567	No
2	JMJD1B	1428320_at 1438508_at 1458417_at	178	1.820	0.0841	No
3	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	240	1.610	0.1114	No
4	SP3	1431804_a_at 1459360_at	323	1.395	0.1337	No
5	NR2C2	1425014_at 1439696_at 1445613_at 1446955_at 1451569_at 1454167_at 1454851_at	342	1.348	0.1581	No
6	ZNRF2	1431154_at 1434016_at 1434017_at 1444735_at 1455290_at 1455291_s_at	371	1.278	0.1807	No
7	FBXL11	1435329_at 1443336_at 1444358_at 1455942_at 1458449_at	413	1.189	0.2010	No
8	PPM1E	1434990_at 1445741_at	855	0.624	0.1924	No
9	FKRP	1436812_at 1437536_at 1438414_at	880	0.602	0.2026	No
10	CENPB	1426051_a_at 1435944_s_at	956	0.563	0.2097	No
11	CHRDL1	1421295_at 1424945_at 1434201_at 1456722_at	1022	0.525	0.2165	No
12	EIF2S1	1440272_at 1452662_a_at	1087	0.495	0.2228	No
13	NETO1	1425132_at 1456283_at	1379	0.386	0.2167	No
14	SP4	1421504_at 1437508_at	1408	0.377	0.2224	No
15	MXD4	1422574_at 1434378_a_at 1434379_at	1482	0.356	0.2258	No
16	NFATC3	1419976_s_at 1452497_a_at	1498	0.354	0.2317	No
17	YTHDF2	1451317_at 1460357_at	1620	0.328	0.2323	No
18	SOX9	1424950_at 1433889_at 1451538_at	1739	0.306	0.2326	No
19	CBX6	1424407_s_at 1429290_at	1753	0.304	0.2376	No
20	HOXA3	1427433_s_at 1441070_at 1452421_at	1777	0.299	0.2422	No
21	JPH1	1421520_at 1438428_at	1950	0.268	0.2393	No
22	HIF1A	1427418_a_at 1431981_at 1448183_a_at 1457231_at	1969	0.265	0.2434	No
23	UBE1C	1417202_s_at 1431746_a_at 1435164_s_at	2232	0.232	0.2357	No
24	EIF3S10	1416659_at 1416660_at 1416661_at 1448425_at	2233	0.232	0.2400	No
25	TRERF1	1444654_at	2651	0.186	0.2244	No
26	LRP1	1442849_at 1448655_at	2823	0.174	0.2198	No
27	DLL4	1421826_at 1421827_at	3144	0.153	0.2079	No
28	KITLG	1415854_at 1415855_at 1426152_a_at 1440621_at 1448117_at	3167	0.151	0.2097	No
29	PAK3	1417923_at 1417924_at 1437318_at	3245	0.148	0.2090	No
30	SLC25A28	1424776_a_at	3318	0.144	0.2083	No
31	FBXL12	1448420_a_at	3754	0.125	0.1907	No
32	KCNH8	1440980_at 1459015_at	3919	0.119	0.1854	No
33	MMP14	1416572_at 1448383_at	3948	0.117	0.1863	No
34	GRIK3	1427709_at	4006	0.115	0.1858	No
35	NELF	1436959_x_at 1439398_x_at 1442706_at 1449474_a_at	4183	0.109	0.1798	No
36	RXRB	1416990_at	4338	0.104	0.1746	No
37	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	4623	0.097	0.1634	No
38	TMEM24	1428095_a_at 1457585_at	4862	0.090	0.1542	No
39	KCNK12	1441280_at	4966	0.088	0.1511	No
40	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	5045	0.086	0.1491	No
41	PRDM16	1429308_at 1429309_at 1440745_at 1440870_at 1443251_at	5465	0.077	0.1313	No
42	APLP1	1416134_at 1435857_s_at	5793	0.070	0.1176	No
43	CTCF	1418330_at 1449042_at	5882	0.068	0.1148	No
44	UST	1437293_x_at 1439218_at 1444275_at 1458897_at 1459970_at	5912	0.068	0.1147	No
45	LHX6	1422262_a_at 1425094_a_at	6174	0.063	0.1039	No
46	CREB3L1	1419295_at	6469	0.057	0.0915	No
47	RAB5C	1424684_at	6736	0.053	0.0802	No
48	VEGF	1420909_at 1451959_a_at	7101	0.047	0.0644	No
49	MAP1LC3A	1447883_x_at 1451290_at	7233	0.044	0.0592	No
50	SLITRK5	1429718_at	7323	0.043	0.0559	No
51	IL11	1449982_at	7392	0.042	0.0535	No
52	RCOR2	1417302_at	7486	0.040	0.0500	No
53	CDK9	1417269_at 1457240_at	7509	0.040	0.0498	No
54	NOTCH3	1421964_at 1421965_s_at 1443300_at	7574	0.039	0.0476	No
55	CEECAM1	1435345_at	8067	0.032	0.0255	No
56	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	8591	0.024	0.0020	No
57	MAP3K6	1449901_a_at	8618	0.024	0.0012	No
58	IGFBP7	1423584_at 1437804_at	8809	0.021	-0.0071	No
59	UBE2M	1424345_s_at 1425858_at	8843	0.021	-0.0082	No
60	PPP2R5B	1426811_at	9029	0.019	-0.0164	No
61	BARX1	1423342_at	9118	0.017	-0.0201	No
62	PTPRG	1447906_at 1450122_at	9347	0.014	-0.0303	No
63	CNKSR2	1444513_at 1445194_at	9626	0.010	-0.0429	No
64	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	9988	0.006	-0.0594	No
65	SLC6A11	1433989_at 1453871_at	10144	0.003	-0.0664	No
66	PTMA	1423455_at	10147	0.003	-0.0665	No
67	PITX2	1424797_a_at 1450482_a_at	10193	0.003	-0.0685	No
68	BTBD14B	1420968_at 1420969_at 1433139_at 1433140_a_at 1443382_s_at 1458200_at	10234	0.002	-0.0703	No
69	ARID1A	1447104_at	10550	-0.002	-0.0847	No
70	RFXDC1	1457613_at	10708	-0.004	-0.0919	No
71	DSCAML1	1427392_at 1427734_a_at 1432196_a_at 1441706_at 1457463_at	10955	-0.007	-0.1030	No
72	SCN5A	1422194_at 1458813_at	11415	-0.013	-0.1239	No
73	HIC1	1449226_at	11462	-0.014	-0.1257	No
74	NXPH4	1429753_at	11532	-0.015	-0.1286	No
75	LIN28	1437752_at	11641	-0.016	-0.1333	No
76	P4HA1	1426519_at 1452094_at	11674	-0.017	-0.1345	No
77	SEMA6C	1423454_a_at 1437652_at 1451898_a_at	11808	-0.018	-0.1402	No
78	BAT3	1433890_a_at	11926	-0.020	-0.1452	No
79	HR	1422110_at 1435950_at	12120	-0.022	-0.1537	No
80	DGKG	1419756_at 1431167_at 1449584_at	12165	-0.023	-0.1553	No
81	DULLARD	1452100_at	12166	-0.023	-0.1549	No
82	ATP5H	1423676_at 1435112_a_at	12509	-0.027	-0.1701	No
83	SOS1	1421884_at 1421885_at 1421886_at	12908	-0.033	-0.1877	No
84	MKNK2	1418300_a_at 1449029_at	13091	-0.035	-0.1954	No
85	THAP11	1416428_at	13117	-0.035	-0.1959	No
86	MAP3K11	1450669_at	13197	-0.037	-0.1989	No
87	HSPC171	1419287_at	13242	-0.038	-0.2002	No
88	ARTN	1432032_a_at	13295	-0.038	-0.2019	No
89	PPP1R12C	1431092_at 1454848_at	13328	-0.039	-0.2026	No
90	EGLN2	1416533_at	13399	-0.040	-0.2051	No
91	CABP7	1425963_at	13921	-0.048	-0.2281	No
92	TEAD2	1448519_at	14306	-0.054	-0.2448	No
93	ATF5	1425927_a_at	14518	-0.057	-0.2534	No
94	MAP2K2	1415974_at 1443436_at 1460636_at	14594	-0.058	-0.2557	No
95	DPF3	1441659_at 1442686_at 1450162_at	14613	-0.059	-0.2555	No
96	CSMD3	1438272_at 1438572_at 1454245_at	14687	-0.060	-0.2577	No
97	SPAG9	1430556_at 1433648_at 1437676_at	14688	-0.060	-0.2566	No
98	FBXO34	1431811_a_at	14762	-0.061	-0.2588	No
99	KLF13	1432543_a_at 1456030_at	14771	-0.061	-0.2580	No
100	FBS1	1425276_at 1451645_at	14819	-0.062	-0.2590	No
101	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	14844	-0.062	-0.2590	No
102	CIC	1415746_at	14886	-0.063	-0.2597	No
103	CIB1	1425856_at 1448564_at	14945	-0.064	-0.2611	No
104	HOXC10	1439798_at	15057	-0.066	-0.2650	No
105	DSCAM	1419293_at 1431801_at 1441082_at 1449411_at	15476	-0.073	-0.2828	No
106	WNT10A	1460657_at	15513	-0.074	-0.2831	No
107	TRPC1	1421095_a_at 1421096_at	15652	-0.076	-0.2880	No
108	POU3F2	1450831_at 1453478_at 1457734_at	15793	-0.079	-0.2930	No
109	CXXC5	1431469_a_at 1448960_at	15807	-0.079	-0.2921	No
110	S100A16	1425560_a_at 1447676_x_at	15822	-0.079	-0.2913	No
111	HNRPL	1424101_at 1445594_at	15823	-0.079	-0.2898	No
112	GAS7	1417859_at 1431400_a_at 1445685_at	15917	-0.081	-0.2926	No
113	THRA	1426997_at 1443952_at 1454675_at	16064	-0.084	-0.2977	No
114	SLC39A7	1416949_s_at	16332	-0.089	-0.3083	No
115	ADRA2C	1422335_at 1435296_at 1439762_x_at 1457328_at	16344	-0.090	-0.3071	No
116	ARPC4	1423588_at 1423589_at	16406	-0.091	-0.3082	No
117	DGCR2	1421809_at 1421810_at 1435276_a_at	16679	-0.097	-0.3189	No
118	LOXL4	1421153_at 1450134_at	16718	-0.098	-0.3188	No
119	PRR3	1424145_at	16733	-0.098	-0.3176	No
120	PDGFB	1450413_at 1450414_at	16775	-0.099	-0.3177	No
121	FKBP14	1433481_at 1458225_at	16875	-0.102	-0.3203	No
122	PPARD	1425703_at 1439797_at	16905	-0.102	-0.3197	No
123	DRD2	1418950_at	16992	-0.105	-0.3217	No
124	CITED1	1449031_at	17380	-0.115	-0.3374	No
125	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	17428	-0.116	-0.3373	No
126	TLK2	1416944_a_at 1431827_a_at 1454018_at 1457357_at	17679	-0.123	-0.3465	No
127	MFNG	1416992_at	18113	-0.136	-0.3639	No
128	C1ORF24	1422567_at 1454942_at	18320	-0.143	-0.3707	No
129	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	18470	-0.148	-0.3748	No
130	SLC12A4	1417446_at	18685	-0.156	-0.3817	No
131	CLDN7	1448393_at	18773	-0.160	-0.3827	No
132	ETV4	1423232_at 1443381_at	18982	-0.169	-0.3891	No
133	LRP8	1421459_a_at 1440882_at 1442347_at	19149	-0.176	-0.3934	No
134	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	19200	-0.179	-0.3924	No
135	RPIA	1418337_at	19310	-0.185	-0.3939	No
136	LMO4	1420981_a_at 1439651_at	19371	-0.188	-0.3931	No
137	LDB1	1452024_a_at	19415	-0.191	-0.3915	No
138	RARG	1419415_a_at 1419416_a_at	19450	-0.194	-0.3895	No
139	POU3F1	1422068_at 1460038_at	19722	-0.213	-0.3979	No
140	RARA	1450180_a_at	19897	-0.227	-0.4017	No
141	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	20058	-0.242	-0.4045	No
142	UBTF	1453097_a_at 1455490_at 1460304_a_at	20171	-0.256	-0.4049	Yes
143	PLP2	1453572_a_at	20200	-0.259	-0.4013	Yes
144	HTATIP	1433980_at 1433981_s_at	20270	-0.266	-0.3995	Yes
145	SIX1	1427277_at	20432	-0.287	-0.4015	Yes
146	MAFB	1451715_at 1451716_at	20525	-0.300	-0.4002	Yes
147	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	20547	-0.302	-0.3955	Yes
148	DMPK	1422989_a_at 1434944_at	20619	-0.316	-0.3928	Yes
149	LTA	1420353_at	20762	-0.339	-0.3930	Yes
150	LPHN3	1427809_at 1428523_at 1439313_at 1442276_at 1445108_at 1446197_at 1446918_at 1447551_x_at 1452561_at 1452819_at 1457950_at 1458742_at 1458772_at 1459295_at 1460440_at	20782	-0.344	-0.3875	Yes
151	E2F3	1427462_at 1434564_at	20809	-0.350	-0.3821	Yes
152	NFIB	1416293_at 1427680_a_at 1434101_at 1434102_at 1438072_at 1438244_at 1442214_at 1444800_at 1448288_at 1454834_at	20865	-0.365	-0.3778	Yes
153	ZFP36L1	1422528_a_at 1450644_at	20913	-0.379	-0.3729	Yes
154	APLP2	1421887_a_at 1421888_x_at 1421889_a_at 1423739_x_at 1432344_a_at 1446786_at	20914	-0.379	-0.3658	Yes
155	IRF1	1448436_a_at	20997	-0.403	-0.3620	Yes
156	PDLIM2	1423946_at	21008	-0.409	-0.3548	Yes
157	IL4I1	1419192_at	21061	-0.427	-0.3492	Yes
158	PTGIR	1427313_at	21165	-0.467	-0.3452	Yes
159	SMAD7	1423389_at 1440952_at 1443771_x_at	21183	-0.478	-0.3371	Yes
160	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	21378	-0.616	-0.3345	Yes
161	RELB	1417856_at	21402	-0.637	-0.3236	Yes
162	CD83	1416111_at	21414	-0.651	-0.3120	Yes
163	BCL3	1418133_at	21503	-0.742	-0.3021	Yes
164	ERF	1422114_at 1435561_at	21763	-1.358	-0.2886	Yes
165	HNRPDL	1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at	21779	-1.403	-0.2631	Yes
166	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	21793	-1.500	-0.2356	Yes
167	PHF15	1430081_at 1455345_at	21828	-1.631	-0.2067	Yes
168	NDST1	1422044_at 1428367_at 1442995_at 1445505_at 1460436_at	21881	-1.883	-0.1739	Yes
169	KLF12	1439846_at 1439847_s_at 1441040_at 1455521_at	21889	-2.012	-0.1366	Yes
170	ELOVL1	1425676_a_at 1443820_x_at 1455994_x_at 1456530_x_at	21916	-2.764	-0.0861	Yes
171	PABPC1	1418883_a_at 1419500_at 1453840_at	21929	-4.646	0.0002	Yes